RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 PCDH11XQ9BZA7 1347 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 PCDH11YQ9BZA8 1340 aa8.68□□□□□ -1.02
SEC22C-215ENST00000487701 SIPA1L3O60292 1781 aaPredicted RBP8.68□□□□□ -1.02
SEC22C-215ENST00000487701 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
SEC22C-215ENST00000487701 C5P01031 1676 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 GSK3AP49840 483 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 MTFR1Q15390 333 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 CCDC102BQ68D86 513 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 SULT6B1Q6IMI4 303 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 SRCAPQ6ZRS2 3230 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 USP3Q9Y6I4 520 aa8.67□□□□□ -1.02
SEC22C-215ENST00000487701 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 CDK2AP1O14519 115 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 HMOX1P09601 288 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 GAS6Q14393 721 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 EFHC2Q5JST6 749 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 PPP1R12CQ9BZL4 782 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 CASZ1Q86V15 1759 aa8.66□□□□□ -1.02
SEC22C-215ENST00000487701 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
SEC22C-215ENST00000487701 PLSCR1O15162 318 aa8.65□□□□□ -1.02
SEC22C-215ENST00000487701 PHKG2P15735 406 aa8.65□□□□□ -1.02
SEC22C-215ENST00000487701 RASA1P20936 1047 aa8.65□□□□□ -1.02
SEC22C-215ENST00000487701 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
SEC22C-215ENST00000487701 ADAMTS8Q9UP79 889 aa8.65□□□□□ -1.02
SEC22C-215ENST00000487701 IQSEC3Q9UPP2 1182 aaPredicted RBP8.65□□□□□ -1.02
SEC22C-215ENST00000487701 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
SEC22C-215ENST00000487701 LMOD1P29536 600 aaPredicted RBP8.64□□□□□ -1.03
SEC22C-215ENST00000487701 SLC9A9Q8IVB4 645 aa8.64□□□□□ -1.03
SEC22C-215ENST00000487701 LARGE2Q8N3Y3 721 aa8.64□□□□□ -1.03
SEC22C-215ENST00000487701 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
SEC22C-215ENST00000487701 SYTL4Q96C24 671 aaPredicted RBP8.64□□□□□ -1.03
SEC22C-215ENST00000487701 MBIPQ9NS73 344 aa8.64□□□□□ -1.03
SEC22C-215ENST00000487701 SCHIP1Q9P0W5 487 aaPredicted RBP8.64□□□□□ -1.03
SEC22C-215ENST00000487701 PARP3Q9Y6F1 533 aa8.64□□□□□ -1.03
SEC22C-215ENST00000487701 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
SEC22C-215ENST00000487701 UBR2Q8IWV8 1755 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 ZNF831Q5JPB2 1677 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 U2SURPO15042 1029 aaKnown RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 ZBTB7BO15156 539 aaPredicted RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 SRSF11Q05519 484 aaKnown RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 LBRQ14739 615 aaKnown RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 ARSJQ5FYB0 599 aaPredicted RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 TBCELQ5QJ74 424 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
SEC22C-215ENST00000487701 IFNL2Q8IZJ0 200 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 CFAP53Q96M91 514 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 MRC1P22897 1456 aa8.63□□□□□ -1.03
SEC22C-215ENST00000487701 MYH14Q7Z406 1995 aaKnown RBP8.62□□□□□ -1.03
SEC22C-215ENST00000487701 LRP5O75197 1615 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 THBS1P07996 1170 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 ATP4AP20648 1035 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 RALBP1Q15311 655 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 AMOTQ4VCS5 1084 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 PLEKHO1Q53GL0 409 aaPredicted RBP8.62□□□□□ -1.03
SEC22C-215ENST00000487701 SIX5Q8N196 739 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 C1orf216Q8TAB5 229 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 CRISPLD1Q9H336 500 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 ZNF232Q9UNY5 417 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 TJP1Q07157 1748 aa8.62□□□□□ -1.03
SEC22C-215ENST00000487701 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
SEC22C-215ENST00000487701 MYBBP1AQ9BQG0 1328 aaKnown RBP8.61□□□□□ -1.03
SEC22C-215ENST00000487701 C4BP0C0L5 1744 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 SFI1A8K8P3 1242 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 MX2P20592 715 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 EPHA4P54764 986 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 MTHFSDQ2M296 383 aaKnown RBP8.61□□□□□ -1.03
SEC22C-215ENST00000487701 MPRIPQ6WCQ1 1025 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 ZNF295-AS1Q8N0V1 137 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 TSEN2Q8NCE0 465 aaKnown RBP8.61□□□□□ -1.03
SEC22C-215ENST00000487701 WHAMMQ8TF30 809 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 PIGBQ92521 554 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 PRKRIP1Q9H875 184 aaPredicted RBP8.61□□□□□ -1.03
SEC22C-215ENST00000487701 LRRC4BQ9NT99 713 aa8.61□□□□□ -1.03
SEC22C-215ENST00000487701 COL24A1Q17RW2 1714 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 U2AF1L5P0DN76 240 aaPredicted RBP8.6□□□□□ -1.03
SEC22C-215ENST00000487701 PRKAR2BP31323 418 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 KCNQ4P56696 695 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 U2AF1Q01081 240 aaKnown RBP eCLIP8.6□□□□□ -1.03
SEC22C-215ENST00000487701 FOXK2Q01167 660 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 R3HDM1Q15032 1099 aaKnown RBP8.6□□□□□ -1.03
SEC22C-215ENST00000487701 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 PHACTR3Q96KR7 559 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 TSPAN10Q9H1Z9 355 aaPredicted RBP8.6□□□□□ -1.03
SEC22C-215ENST00000487701 ZDHHC3Q9NYG2 299 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
SEC22C-215ENST00000487701 CHMP3Q9Y3E7 222 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 PALLDQ8WX93 1383 aa8.6□□□□□ -1.03
SEC22C-215ENST00000487701 ARHGEF15O94989 841 aa8.59□□□□□ -1.03
SEC22C-215ENST00000487701 HSP90AB1P08238 724 aaKnown RBP8.59□□□□□ -1.03
SEC22C-215ENST00000487701 MAP3K10Q02779 954 aa8.59□□□□□ -1.03
SEC22C-215ENST00000487701 RASSF7Q02833 373 aa8.59□□□□□ -1.03
SEC22C-215ENST00000487701 CRTC2Q53ET0 693 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms