RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 NPR3P17342 541 aa7.65□□□□□ -1.18
UBR3-211ENST00000487689 ADMP35318 185 aa7.65□□□□□ -1.18
UBR3-211ENST00000487689 HGSNATQ68CP4 663 aa7.65□□□□□ -1.18
UBR3-211ENST00000487689 USP26Q9BXU7 913 aa7.65□□□□□ -1.18
UBR3-211ENST00000487689 TRPA1O75762 1119 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 TIAF1O95411 115 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 FBLIM1Q8WUP2 373 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 NXPE3Q969Y0 559 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 TBC1D32Q96NH3 1257 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 ZKSCAN3Q9BRR0 538 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 TMPRSS13Q9BYE2 586 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 CHRDQ9H2X0 955 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 CYP4F12Q9HCS2 524 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 BRPF3Q9ULD4 1205 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 SOX13Q9UN79 622 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
UBR3-211ENST00000487689 NFKBIEO00221 500 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 USP11P51784 963 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 PDE4CQ08493 712 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 ZNF211Q13398 564 aaPredicted RBP7.63□□□□□ -1.19
UBR3-211ENST00000487689 HP1BP3Q5SSJ5 553 aaPredicted RBP7.63□□□□□ -1.19
UBR3-211ENST00000487689 CDPF1Q6NVV7 123 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 GLYCTKQ8IVS8 523 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 SMG8Q8ND04 991 aaKnown RBP7.63□□□□□ -1.19
UBR3-211ENST00000487689 DDX54Q8TDD1 881 aaKnown RBP7.63□□□□□ -1.19
UBR3-211ENST00000487689 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 ANO2Q9NQ90 1003 aa7.63□□□□□ -1.19
UBR3-211ENST00000487689 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.63□□□□□ -1.19
UBR3-211ENST00000487689 FAM170BA6NMN3 283 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 DRD2P14416 443 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 ERICH6Q7L0X2 663 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 HHIPQ96QV1 700 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 YIPF2Q9BWQ6 316 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 ZFYVE1Q9HBF4 777 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 PRKAG2Q9UGJ0 569 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 EGFL7Q9UHF1 273 aa7.62□□□□□ -1.19
UBR3-211ENST00000487689 FOXD3Q9UJU5 478 aaPredicted RBP7.62□□□□□ -1.19
UBR3-211ENST00000487689 NDUFB5O43674 189 aa7.61□□□□□ -1.19
UBR3-211ENST00000487689 GSTM4Q03013 218 aa7.61□□□□□ -1.19
UBR3-211ENST00000487689 SOX17Q9H6I2 414 aaPredicted RBP7.61□□□□□ -1.19
UBR3-211ENST00000487689 SUGCTQ9HAC7 445 aa7.61□□□□□ -1.19
UBR3-211ENST00000487689 ZC3H7BQ9UGR2 993 aaKnown RBP7.61□□□□□ -1.19
UBR3-211ENST00000487689 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.61□□□□□ -1.19
UBR3-211ENST00000487689 CARMIL2Q6F5E8 1435 aa7.61□□□□□ -1.19
UBR3-211ENST00000487689 KRTAP9-7A8MTY7 169 aa7.6□□□□□ -1.19
UBR3-211ENST00000487689 FZD6O60353 706 aa7.6□□□□□ -1.19
UBR3-211ENST00000487689 PDE3BQ13370 1112 aa7.6□□□□□ -1.19
UBR3-211ENST00000487689 GJD3Q8N144 294 aa7.6□□□□□ -1.19
UBR3-211ENST00000487689 BHLHE41Q9C0J9 482 aaPredicted RBP7.6□□□□□ -1.19
UBR3-211ENST00000487689 ZFYVE28Q9HCC9 887 aa7.6□□□□□ -1.19
UBR3-211ENST00000487689 LRRC4CQ9HCJ2 640 aa7.6□□□□□ -1.19
UBR3-211ENST00000487689 LOC100289279A0A1B0GTE1 492 aa7.59□□□□□ -1.19
UBR3-211ENST00000487689 H3BRB1 525 aa7.59□□□□□ -1.19
UBR3-211ENST00000487689 BIN1O00499 593 aa7.59□□□□□ -1.19
UBR3-211ENST00000487689 SOX1O00570 391 aaPredicted RBP7.59□□□□□ -1.19
UBR3-211ENST00000487689 FARP2O94887 1054 aaPredicted RBP7.59□□□□□ -1.19
UBR3-211ENST00000487689 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
UBR3-211ENST00000487689 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
UBR3-211ENST00000487689 CCDC87Q9NVE4 849 aa7.59□□□□□ -1.19
UBR3-211ENST00000487689 ICMTO60725 284 aa7.58□□□□□ -1.2
UBR3-211ENST00000487689 DLGAP3O95886 979 aa7.58□□□□□ -1.2
UBR3-211ENST00000487689 PLCL1Q15111 1095 aa7.58□□□□□ -1.2
UBR3-211ENST00000487689 PKN1Q16512 942 aa7.58□□□□□ -1.2
UBR3-211ENST00000487689 VN1R5Q7Z5H4 357 aa7.58□□□□□ -1.2
UBR3-211ENST00000487689 C2CD4AQ8NCU7 369 aaPredicted RBP7.58□□□□□ -1.2
UBR3-211ENST00000487689 GATA6Q92908 595 aa7.58□□□□□ -1.2
UBR3-211ENST00000487689 CYP11A1P05108 521 aa7.57□□□□□ -1.2
UBR3-211ENST00000487689 POLR3DP05423 398 aaPredicted RBP7.57□□□□□ -1.2
UBR3-211ENST00000487689 ESRRAP11474 423 aaPredicted RBP7.57□□□□□ -1.2
UBR3-211ENST00000487689 HNRNPUQ00839 825 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBR3-211ENST00000487689 ZNF792Q3KQV3 632 aa7.57□□□□□ -1.2
UBR3-211ENST00000487689 EXOSC6Q5RKV6 272 aaKnown RBP7.57□□□□□ -1.2
UBR3-211ENST00000487689 DUSP27Q5VZP5 1158 aa7.57□□□□□ -1.2
UBR3-211ENST00000487689 ZNF574Q6ZN55 896 aaPredicted RBP7.57□□□□□ -1.2
UBR3-211ENST00000487689 CCER1Q8TC90 406 aaPredicted RBP7.57□□□□□ -1.2
UBR3-211ENST00000487689 EZH1Q92800 747 aaPredicted RBP7.57□□□□□ -1.2
UBR3-211ENST00000487689 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
UBR3-211ENST00000487689 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
UBR3-211ENST00000487689 PHLDB3Q6NSJ2 640 aa7.56□□□□□ -1.2
UBR3-211ENST00000487689 BCL7CQ8WUZ0 217 aaPredicted RBP7.56□□□□□ -1.2
UBR3-211ENST00000487689 CLEC4MQ9H2X3 399 aaPredicted RBP7.56□□□□□ -1.2
UBR3-211ENST00000487689 C1orf115Q9H7X2 142 aa7.56□□□□□ -1.2
UBR3-211ENST00000487689 LATS2Q9NRM7 1088 aa7.56□□□□□ -1.2
UBR3-211ENST00000487689 RAD18Q9NS91 495 aa7.56□□□□□ -1.2
UBR3-211ENST00000487689 SLC5A6Q9Y289 635 aa7.56□□□□□ -1.2
UBR3-211ENST00000487689 A0A096LPE4 126 aa7.55□□□□□ -1.2
UBR3-211ENST00000487689 A0A1W2PPZ6 126 aa7.55□□□□□ -1.2
UBR3-211ENST00000487689 SOX4Q06945 474 aaPredicted RBP7.55□□□□□ -1.2
UBR3-211ENST00000487689 PCDH1Q08174 1060 aa7.55□□□□□ -1.2
UBR3-211ENST00000487689 ZNF765Q7L2R6 523 aa7.55□□□□□ -1.2
UBR3-211ENST00000487689 KSR1Q8IVT5 923 aa7.55□□□□□ -1.2
UBR3-211ENST00000487689 CPNE3O75131 537 aaKnown RBP7.54□□□□□ -1.2
UBR3-211ENST00000487689 PEAR1Q5VY43 1037 aaPredicted RBP7.54□□□□□ -1.2
UBR3-211ENST00000487689 SPRED2Q7Z698 418 aa7.54□□□□□ -1.2
UBR3-211ENST00000487689 GALNT12Q8IXK2 581 aa7.54□□□□□ -1.2
UBR3-211ENST00000487689 CITED4Q96RK1 184 aa7.54□□□□□ -1.2
UBR3-211ENST00000487689 ARID3AQ99856 593 aa7.54□□□□□ -1.2
UBR3-211ENST00000487689 CORO1BQ9BR76 489 aa7.54□□□□□ -1.2
UBR3-211ENST00000487689 EHD4Q9H223 541 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms