RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CMA1P23946 247 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 IQCB1Q15051 598 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 CYP26C1Q6V0L0 522 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 SLC26A6Q9BXS9 759 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 FANCLQ9NW38 375 aa17.33■□□□□ 0.37
HLA-DQB1-209ENST00000487676 ATP2C2O75185 946 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCT5P48643 541 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 NECTIN1Q15223 517 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CFAP58Q5T655 872 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PYM1Q9BRP8 204 aaKnown RBP17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CPSF1Q10570 1443 aaKnown RBP17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 EDC4Q6P2E9 1401 aaKnown RBP17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TRIM21P19474 475 aaKnown RBP17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RRAGBQ5VZM2 374 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RSRC1Q96IZ7 334 aaKnown RBP17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 UBAC1Q9BSL1 405 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RTEL1Q9NZ71 1219 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 MADDQ8WXG6 1647 aa17.33■□□□□ 0.36
HLA-DQB1-209ENST00000487676 A0A0D9SFI3 127 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CUTAO60888 179 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 NAA25Q14CX7 972 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 E4F1Q66K89 784 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 BABAM1Q9NWV8 329 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 GOLGA6L10A0A0M3HER8 536 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 IFFO1Q0D2I5 559 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCDC50Q8IVM0 306 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TANGO6Q9C0B7 1094 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 L2HGDHQ9H9P8 463 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SPATS2Q86XZ4 545 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCDC82Q8N4S0 544 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PI4K2BQ8TCG2 481 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 LUC7L2Q9Y383 392 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RNF40O75150 1001 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PLA2G4AP47712 749 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TRIM14Q14142 442 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TAX1BP1Q86VP1 789 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ANKRD18AQ8IVF6 992 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 INCENPQ9NQS7 918 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PSD3Q9NYI0 1048 aa17.32■□□□□ 0.36
HLA-DQB1-209ENST00000487676 IFIT3O14879 490 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ZBTB43O43298 467 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCDC129Q6ZRS4 1044 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CASP8Q14790 479 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CCDC51Q96ER9 411 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CAPS2Q9BXY5 557 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 AKAP2Q9Y2D5 859 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 FHOD1Q9Y613 1164 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CLNS1AP54105 237 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 GNGT1P63211 74 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ACEP12821 1306 aa17.31■□□□□ 0.36
HLA-DQB1-209ENST00000487676 VSTM4Q8IW00 320 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 AKR1B10O60218 316 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RAPGEF3O95398 923 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 TMEM67Q5HYA8 995 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 DNA2P51530 1060 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PNOCQ13519 176 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SPECC1Q5M775 1068 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 YY1AP1Q9H869 796 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 LOC102724159A0A0B4J2E5 919 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 MTIF2P46199 727 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SARNPP82979 210 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PWP2Q15269 919 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 FMNL3Q8IVF7 1028 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
HLA-DQB1-209ENST00000487676 BMP15O95972 392 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SCRN1Q12765 414 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 SND1Q7KZF4 910 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 AIDAQ96BJ3 306 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 FTOQ9C0B1 505 aaKnown RBP eCLIP17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 UNC13BO14795 1591 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 A0A087WZG4 1122 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 HELLSQ9NRZ9 838 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 PAG1Q9NWQ8 432 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ANKRD65E5RJM6 399 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 CACNA2D4Q7Z3S7 1137 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ZNF274Q96GC6 653 aaPredicted RBP17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 GDAP1L1Q96MZ0 367 aa17.29■□□□□ 0.36
HLA-DQB1-209ENST00000487676 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ARHGAP31Q2M1Z3 1444 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 IDEP14735 1019 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 UBXN1Q04323 297 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 ZRSR2Q15696 482 aaKnown RBP17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 EPC1Q9H2F5 836 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
HLA-DQB1-209ENST00000487676 UBE3BQ7Z3V4 1068 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms