RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SUGT1Q9Y2Z0 365 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 PPP2R3BQ9Y5P8 575 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 COL1A1P02452 1464 aaPredicted RBP25.31■■□□□ 1.64
HDAC4-209ENST00000487617 PAPPA2Q9BXP8 1791 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 SPDYE2Q495Y8 402 aa25.3■■□□□ 1.64
HDAC4-209ENST00000487617 TEKT1Q969V4 418 aa25.3■■□□□ 1.64
HDAC4-209ENST00000487617 ZIC5Q96T25 663 aa25.3■■□□□ 1.64
HDAC4-209ENST00000487617 ZNF70Q9UC06 446 aaPredicted RBP25.3■■□□□ 1.64
HDAC4-209ENST00000487617 ARAP2Q8WZ64 1704 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 A0A1B0GUL7 405 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 SLC10A3P09131 477 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 MS4A1P11836 297 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 ATP8B2P98198 1209 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 PRKG1Q13976 671 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 RCAN3Q9UKA8 241 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 MAST3O60307 1309 aa25.29■■□□□ 1.64
HDAC4-209ENST00000487617 SEMA3EO15041 775 aa25.28■■□□□ 1.64
HDAC4-209ENST00000487617 LBX1P52954 281 aa25.28■■□□□ 1.64
HDAC4-209ENST00000487617 POLA2Q14181 598 aa25.28■■□□□ 1.64
HDAC4-209ENST00000487617 CCDC102BQ68D86 513 aa25.28■■□□□ 1.64
HDAC4-209ENST00000487617 ARMC9Q7Z3E5 817 aa25.28■■□□□ 1.64
HDAC4-209ENST00000487617 DENND2AQ9ULE3 1009 aa25.28■■□□□ 1.64
HDAC4-209ENST00000487617 HSPA8P11142 646 aaKnown RBP25.27■■□□□ 1.64
HDAC4-209ENST00000487617 TNFAIP1Q13829 316 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 RASA3Q14644 834 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 RASAL3Q86YV0 1011 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 SSH3Q8TE77 659 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 XAGE2Q96GT9 111 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 NEUROD6Q96NK8 337 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 MRIQ9BWK5 157 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 PRDM10Q9NQV6 1147 aa25.27■■□□□ 1.64
HDAC4-209ENST00000487617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.27■■□□□ 1.64
HDAC4-209ENST00000487617 KIF23Q02241 960 aaPredicted RBP25.26■■□□□ 1.63
HDAC4-209ENST00000487617 MVPQ14764 893 aaKnown RBP25.26■■□□□ 1.63
HDAC4-209ENST00000487617 OS9Q13438 667 aaPredicted RBP25.25■■□□□ 1.63
HDAC4-209ENST00000487617 SUPT20HL1Q3ZLR7 823 aa25.25■■□□□ 1.63
HDAC4-209ENST00000487617 ZDHHC15Q96MV8 337 aa25.25■■□□□ 1.63
HDAC4-209ENST00000487617 ANGEL1Q9UNK9 670 aaKnown RBP25.25■■□□□ 1.63
HDAC4-209ENST00000487617 TCP10L2B9ZVM9 353 aa25.24■■□□□ 1.63
HDAC4-209ENST00000487617 NBPF12Q5TAG4 269 aaPredicted RBP25.24■■□□□ 1.63
HDAC4-209ENST00000487617 FZD1Q9UP38 647 aa25.24■■□□□ 1.63
HDAC4-209ENST00000487617 ECM29Q5VYK3 1845 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 ZBTB22O15209 634 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 CA12O43570 354 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 PPP1R12BO60237 982 aaPredicted RBP25.23■■□□□ 1.63
HDAC4-209ENST00000487617 SURF6O75683 361 aaKnown RBP25.23■■□□□ 1.63
HDAC4-209ENST00000487617 LDHBP07195 334 aaKnown RBP25.23■■□□□ 1.63
HDAC4-209ENST00000487617 PRDX5P30044 214 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 GORABQ5T7V8 394 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 IFFO2Q5TF58 517 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 HHIPL2Q6UWX4 724 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 TNS4Q8IZW8 715 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 TSKSQ9UJT2 592 aa25.23■■□□□ 1.63
HDAC4-209ENST00000487617 SALL1Q9NSC2 1324 aa25.22■■□□□ 1.63
HDAC4-209ENST00000487617 TNNI2P48788 182 aa25.22■■□□□ 1.63
HDAC4-209ENST00000487617 RASGRF1Q13972 1273 aa25.22■■□□□ 1.63
HDAC4-209ENST00000487617 APOBEC3HQ6NTF7 200 aaKnown RBP25.22■■□□□ 1.63
HDAC4-209ENST00000487617 TMOD2Q9NZR1 351 aa25.22■■□□□ 1.63
HDAC4-209ENST00000487617 CEP85Q6P2H3 762 aa25.21■■□□□ 1.63
HDAC4-209ENST00000487617 ZGPATQ8N5A5 531 aaKnown RBP25.21■■□□□ 1.63
HDAC4-209ENST00000487617 SSC5DA1L4H1 1573 aa25.21■■□□□ 1.63
HDAC4-209ENST00000487617 CACNB3P54284 484 aa25.2■■□□□ 1.62
HDAC4-209ENST00000487617 DIXDC1Q155Q3 683 aa25.2■■□□□ 1.62
HDAC4-209ENST00000487617 LDLRAD1Q5T700 205 aa25.2■■□□□ 1.62
HDAC4-209ENST00000487617 COG6Q9Y2V7 657 aa25.2■■□□□ 1.62
HDAC4-209ENST00000487617 PDS5AQ29RF7 1337 aaKnown RBP25.19■■□□□ 1.62
HDAC4-209ENST00000487617 MAP3K11Q16584 847 aa25.19■■□□□ 1.62
HDAC4-209ENST00000487617 CSRNP1Q96S65 589 aa25.19■■□□□ 1.62
HDAC4-209ENST00000487617 TMEM39BQ9GZU3 492 aa25.19■■□□□ 1.62
HDAC4-209ENST00000487617 NOP58Q9Y2X3 529 aaKnown RBP25.19■■□□□ 1.62
HDAC4-209ENST00000487617 DAGLAQ9Y4D2 1042 aa25.19■■□□□ 1.62
HDAC4-209ENST00000487617 MYH13Q9UKX3 1938 aa25.19■■□□□ 1.62
HDAC4-209ENST00000487617 TEPSINQ96N21 525 aa25.18■■□□□ 1.62
HDAC4-209ENST00000487617 GPR108Q9NPR9 543 aa25.18■■□□□ 1.62
HDAC4-209ENST00000487617 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.18■■□□□ 1.62
HDAC4-209ENST00000487617 ABCF2Q9UG63 623 aa25.18■■□□□ 1.62
HDAC4-209ENST00000487617 DDX19BQ9UMR2 479 aa25.18■■□□□ 1.62
HDAC4-209ENST00000487617 IREB2P48200 963 aaKnown RBP25.17■■□□□ 1.62
HDAC4-209ENST00000487617 MKRN3Q13064 507 aaKnown RBP25.17■■□□□ 1.62
HDAC4-209ENST00000487617 TNNI3KQ59H18 835 aa25.17■■□□□ 1.62
HDAC4-209ENST00000487617 CDAN1Q8IWY9 1227 aa25.17■■□□□ 1.62
HDAC4-209ENST00000487617 REM2Q8IYK8 340 aaPredicted RBP25.17■■□□□ 1.62
HDAC4-209ENST00000487617 FPGT-TNNI3KV9GXZ4 949 aa25.17■■□□□ 1.62
HDAC4-209ENST00000487617 USP2O75604 605 aaPredicted RBP25.16■■□□□ 1.62
HDAC4-209ENST00000487617 FKBP1CQ5VVH2 108 aa25.16■■□□□ 1.62
HDAC4-209ENST00000487617 SPTY2D1Q68D10 685 aaPredicted RBP25.16■■□□□ 1.62
HDAC4-209ENST00000487617 SLC10A4Q96EP9 437 aa25.16■■□□□ 1.62
HDAC4-209ENST00000487617 HMG20BQ9P0W2 317 aa25.16■■□□□ 1.62
HDAC4-209ENST00000487617 ARID4AP29374 1257 aaPredicted RBP25.15■■□□□ 1.62
HDAC4-209ENST00000487617 DZIP1Q86YF9 867 aaKnown RBP25.15■■□□□ 1.62
HDAC4-209ENST00000487617 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.15■■□□□ 1.62
HDAC4-209ENST00000487617 SPATA5Q8NB90 893 aa25.15■■□□□ 1.62
HDAC4-209ENST00000487617 CLMNQ96JQ2 1002 aa25.15■■□□□ 1.62
HDAC4-209ENST00000487617 UQCRFS1P1P0C7P4 283 aa25.14■■□□□ 1.62
HDAC4-209ENST00000487617 CDC42EP5Q6NZY7 148 aa25.14■■□□□ 1.62
HDAC4-209ENST00000487617 FAM83AQ86UY5 434 aa25.14■■□□□ 1.62
HDAC4-209ENST00000487617 RNF186Q9NXI6 227 aa25.14■■□□□ 1.62
HDAC4-209ENST00000487617 SAGE1Q9NXZ1 904 aa25.14■■□□□ 1.62
HDAC4-209ENST00000487617 UNCXA6NJT0 531 aa25.13■■□□□ 1.61
HDAC4-209ENST00000487617 TRPA1O75762 1119 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms