RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 LAS1LQ9Y4W2 734 aaKnown RBP16.08■□□□□ 0.16
SGIP1-212ENST00000487507 ELNP15502 786 aa16.07■□□□□ 0.16
SGIP1-212ENST00000487507 TCP10L2B9ZVM9 353 aa16.06■□□□□ 0.16
SGIP1-212ENST00000487507 TRIM28Q13263 835 aaKnown RBP16.06■□□□□ 0.16
SGIP1-212ENST00000487507 TMEM39BQ9GZU3 492 aa16.06■□□□□ 0.16
SGIP1-212ENST00000487507 BSDC1Q9NW68 430 aaPredicted RBP16.06■□□□□ 0.16
SGIP1-212ENST00000487507 TAOK2Q9UL54 1235 aa16.06■□□□□ 0.16
SGIP1-212ENST00000487507 IRF6O14896 467 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 ADCY3O60266 1144 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 PCCAP05165 728 aaPredicted RBP16.05■□□□□ 0.16
SGIP1-212ENST00000487507 KCNJ4P48050 445 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 CTSWP56202 376 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 NECAB2Q7Z6G3 386 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 SLAIN1Q8ND83 568 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.16
SGIP1-212ENST00000487507 GREM2Q9H772 168 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 CD209Q9NNX6 404 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 LEMD3Q9Y2U8 911 aa16.05■□□□□ 0.16
SGIP1-212ENST00000487507 PRUNE2Q8WUY3 3088 aa16.04■□□□□ 0.16
SGIP1-212ENST00000487507 SPDYE5A6NIY4 337 aa16.04■□□□□ 0.16
SGIP1-212ENST00000487507 INHAP05111 366 aa16.04■□□□□ 0.16
SGIP1-212ENST00000487507 HELBQ8NG08 1087 aaPredicted RBP16.04■□□□□ 0.16
SGIP1-212ENST00000487507 ZKSCAN4Q969J2 545 aaPredicted RBP16.04■□□□□ 0.16
SGIP1-212ENST00000487507 TDRD3Q9H7E2 651 aaKnown RBP16.04■□□□□ 0.16
SGIP1-212ENST00000487507 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
SGIP1-212ENST00000487507 ZNF70Q9UC06 446 aaPredicted RBP16.04■□□□□ 0.16
SGIP1-212ENST00000487507 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
SGIP1-212ENST00000487507 SNAP23O00161 211 aa16.03■□□□□ 0.16
SGIP1-212ENST00000487507 RIPK4P57078 832 aa16.03■□□□□ 0.16
SGIP1-212ENST00000487507 GOLGA2Q08379 1002 aa16.03■□□□□ 0.16
SGIP1-212ENST00000487507 TNFAIP1Q13829 316 aa16.03■□□□□ 0.16
SGIP1-212ENST00000487507 TEPSINQ96N21 525 aa16.03■□□□□ 0.16
SGIP1-212ENST00000487507 HYPKQ9NX55 129 aa16.03■□□□□ 0.16
SGIP1-212ENST00000487507 CWC25Q9NXE8 425 aaPredicted RBP16.03■□□□□ 0.16
SGIP1-212ENST00000487507 PDHXO00330 501 aa16.02■□□□□ 0.16
SGIP1-212ENST00000487507 FCGRTP55899 365 aa16.02■□□□□ 0.16
SGIP1-212ENST00000487507 ERO1BQ86YB8 467 aa16.02■□□□□ 0.16
SGIP1-212ENST00000487507 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.02■□□□□ 0.16
SGIP1-212ENST00000487507 ZCCHC17Q9NP64 241 aaKnown RBP16.02■□□□□ 0.16
SGIP1-212ENST00000487507 IGHMBP2P38935 993 aaKnown RBP16.01■□□□□ 0.15
SGIP1-212ENST00000487507 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
SGIP1-212ENST00000487507 CCDC191Q8NCU4 936 aa16.01■□□□□ 0.15
SGIP1-212ENST00000487507 TTLL11Q8NHH1 800 aa16.01■□□□□ 0.15
SGIP1-212ENST00000487507 WRNIP1Q96S55 665 aa16.01■□□□□ 0.15
SGIP1-212ENST00000487507 PHAXQ9H814 394 aaKnown RBP16.01■□□□□ 0.15
SGIP1-212ENST00000487507 LAMA2P24043 3122 aaKnown RBP16■□□□□ 0.15
SGIP1-212ENST00000487507 FLT3LGP49771 235 aa16■□□□□ 0.15
SGIP1-212ENST00000487507 MAFAQ8NHW3 353 aaPredicted RBP16■□□□□ 0.15
SGIP1-212ENST00000487507 BABAM1Q9NWV8 329 aa16■□□□□ 0.15
SGIP1-212ENST00000487507 ADGRA2Q96PE1 1338 aa15.99■□□□□ 0.15
SGIP1-212ENST00000487507 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
SGIP1-212ENST00000487507 PPIL2Q13356 520 aa15.99■□□□□ 0.15
SGIP1-212ENST00000487507 FAM122AQ96E09 287 aa15.99■□□□□ 0.15
SGIP1-212ENST00000487507 POTEB2H3BUK9 544 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 TAF5LO75529 589 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 CYP2C8P10632 490 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 PLA2G5P39877 138 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 CACNB3P54284 484 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 NEUROD2Q15784 382 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 CRISPLD2Q9H0B8 497 aa15.98■□□□□ 0.15
SGIP1-212ENST00000487507 PAK6Q9NQU5 681 aaPredicted RBP15.98■□□□□ 0.15
SGIP1-212ENST00000487507 TMEM265A0A087WTH1 108 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 TNNI2P48788 182 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 ANKRD23Q86SG2 305 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 MPHOSPH8Q99549 860 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 CDX2Q99626 313 aaPredicted RBP15.97■□□□□ 0.15
SGIP1-212ENST00000487507 PCGF6Q9BYE7 350 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.97■□□□□ 0.15
SGIP1-212ENST00000487507 TTC28Q96AY4 2481 aa15.97■□□□□ 0.15
SGIP1-212ENST00000487507 CHRNDQ07001 517 aa15.96■□□□□ 0.15
SGIP1-212ENST00000487507 SYMPKQ92797 1274 aaKnown RBP15.96■□□□□ 0.15
SGIP1-212ENST00000487507 NBPF3Q9H094 633 aa15.96■□□□□ 0.15
SGIP1-212ENST00000487507 TTF2Q9UNY4 1162 aaKnown RBP15.96■□□□□ 0.15
SGIP1-212ENST00000487507 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
SGIP1-212ENST00000487507 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
SGIP1-212ENST00000487507 DZIP1LQ8IYY4 767 aaKnown RBP15.95■□□□□ 0.14
SGIP1-212ENST00000487507 MYLIPQ8WY64 445 aa15.95■□□□□ 0.14
SGIP1-212ENST00000487507 PNNQ9H307 717 aaKnown RBP15.95■□□□□ 0.14
SGIP1-212ENST00000487507 C11orf49Q9H6J7 331 aa15.95■□□□□ 0.14
SGIP1-212ENST00000487507 PTPRFP10586 1907 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 TNFRSF10AO00220 468 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 CHL1O00533 1208 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 TNPO2O14787 897 aaKnown RBP15.94■□□□□ 0.14
SGIP1-212ENST00000487507 BCRP11274 1271 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 ITGA6P23229 1130 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 DUSP27Q5VZP5 1158 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 METTL22Q9BUU2 404 aaPredicted RBP15.94■□□□□ 0.14
SGIP1-212ENST00000487507 FAM205AQ6ZU69 1335 aa15.94■□□□□ 0.14
SGIP1-212ENST00000487507 INPP5BP32019 993 aa15.93■□□□□ 0.14
SGIP1-212ENST00000487507 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
SGIP1-212ENST00000487507 PPATQ06203 517 aa15.93■□□□□ 0.14
SGIP1-212ENST00000487507 MFSD14BQ5SR56 506 aa15.93■□□□□ 0.14
SGIP1-212ENST00000487507 MIGA2Q7L4E1 593 aa15.93■□□□□ 0.14
SGIP1-212ENST00000487507 PXYLP1Q8TE99 480 aa15.93■□□□□ 0.14
SGIP1-212ENST00000487507 PARK7Q99497 189 aaKnown RBP15.93■□□□□ 0.14
SGIP1-212ENST00000487507 IL1R1P14778 569 aa15.92■□□□□ 0.14
SGIP1-212ENST00000487507 CRKP46108 304 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms