RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 IGHDP01880 384 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 GYG1P46976 350 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 CAVIN4Q5BKX8 364 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 PRAMEF18Q5VWM3 479 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 ZNF296Q8WUU4 475 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-216ENST00000487485 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 GPR108Q9NPR9 543 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
TOP3B-216ENST00000487485 HIBADHP31937 336 aaKnown RBP13.14□□□□□ -0.31
TOP3B-216ENST00000487485 FKBP1BP68106 108 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 PKN2Q16513 984 aaKnown RBP13.14□□□□□ -0.31
TOP3B-216ENST00000487485 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 RSBN1LQ6PCB5 846 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-216ENST00000487485 ZNF804AQ7Z570 1209 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 PODNQ7Z5L7 613 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-216ENST00000487485 COA1Q9GZY4 146 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 CD209Q9NNX6 404 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
TOP3B-216ENST00000487485 PSME4Q14997 1843 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 MYH13Q9UKX3 1938 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 BCAMP50895 628 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 FBXO33Q7Z6M2 555 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 VPS37DQ86XT2 251 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
TOP3B-216ENST00000487485 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 XAGE2Q96GT9 111 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 GMLQ99445 158 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 BCL11AQ9H165 835 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 ZNF609O15014 1411 aa13.13□□□□□ -0.31
TOP3B-216ENST00000487485 USP17L8P0C7I0 530 aa13.12□□□□□ -0.31
TOP3B-216ENST00000487485 IL1R1P14778 569 aa13.12□□□□□ -0.31
TOP3B-216ENST00000487485 ADORA1P30542 326 aa13.12□□□□□ -0.31
TOP3B-216ENST00000487485 CLASRPQ8N2M8 674 aaKnown RBP13.12□□□□□ -0.31
TOP3B-216ENST00000487485 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
TOP3B-216ENST00000487485 MYOZ2Q9NPC6 264 aa13.12□□□□□ -0.31
TOP3B-216ENST00000487485 GPR25O00155 361 aa13.11□□□□□ -0.31
TOP3B-216ENST00000487485 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
TOP3B-216ENST00000487485 TM4SF4P48230 202 aa13.11□□□□□ -0.31
TOP3B-216ENST00000487485 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
TOP3B-216ENST00000487485 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
TOP3B-216ENST00000487485 AACSQ86V21 672 aa13.11□□□□□ -0.31
TOP3B-216ENST00000487485 TDRD7Q8NHU6 1098 aaKnown RBP13.11□□□□□ -0.31
TOP3B-216ENST00000487485 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
TOP3B-216ENST00000487485 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
TOP3B-216ENST00000487485 CEP290O15078 2479 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 FRAT2O75474 233 aaPredicted RBP13.1□□□□□ -0.31
TOP3B-216ENST00000487485 PHKA1P46020 1223 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 ANKRD45Q5TZF3 282 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 CCDC102BQ68D86 513 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 IQSEC3Q9UPP2 1182 aaPredicted RBP13.1□□□□□ -0.31
TOP3B-216ENST00000487485 ZNF646O15015 1829 aaPredicted RBP13.1□□□□□ -0.31
TOP3B-216ENST00000487485 PITPNM2Q9BZ72 1349 aa13.1□□□□□ -0.31
TOP3B-216ENST00000487485 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 IFIT2P09913 472 aaKnown RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 GTF2IP78347 998 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 TTLL5Q6EMB2 1281 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 B4GALNT3Q6L9W6 998 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
TOP3B-216ENST00000487485 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
TOP3B-216ENST00000487485 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
TOP3B-216ENST00000487485 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.32
TOP3B-216ENST00000487485 FKTNO75072 461 aa13.07□□□□□ -0.32
TOP3B-216ENST00000487485 CHAF1AQ13111 956 aaPredicted RBP13.07□□□□□ -0.32
TOP3B-216ENST00000487485 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
TOP3B-216ENST00000487485 DACT2Q5SW24 774 aa13.07□□□□□ -0.32
TOP3B-216ENST00000487485 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
TOP3B-216ENST00000487485 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
TOP3B-216ENST00000487485 FAM205AQ6ZU69 1335 aa13.07□□□□□ -0.32
TOP3B-216ENST00000487485 WNT10BO00744 389 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 SEMA3EO15041 775 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 UQCRFS1P1P0C7P4 283 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 ARID4AP29374 1257 aaPredicted RBP13.06□□□□□ -0.32
TOP3B-216ENST00000487485 NUCB1Q02818 461 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 PRKG1Q13976 671 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 CCDC136Q96JN2 1154 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 HTTP42858 3142 aa13.06□□□□□ -0.32
TOP3B-216ENST00000487485 ZBTB22O15209 634 aa13.05□□□□□ -0.32
TOP3B-216ENST00000487485 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
TOP3B-216ENST00000487485 RASGRF1Q13972 1273 aa13.05□□□□□ -0.32
TOP3B-216ENST00000487485 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
TOP3B-216ENST00000487485 ZNF512BQ96KM6 892 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms