RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 ZBTB12Q9Y330 459 aaPredicted RBP8.13□□□□□ -1.11
PTPRE-209ENST00000487428 PPP2R3BQ9Y5P8 575 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 MYH1P12882 1939 aa8.13□□□□□ -1.11
PTPRE-209ENST00000487428 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 RFX7Q2KHR2 1363 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 RPAP1Q9BWH6 1393 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 PASKQ96RG2 1323 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 WNT10BO00744 389 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 ERC2O15083 957 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 GLRX3O76003 335 aaKnown RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 ITGBL1O95965 494 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 LDHBP07195 334 aaKnown RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 LDHCP07864 332 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 HIRAP54198 1017 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 GSTO1P78417 241 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 SCARF1Q14162 830 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 KIF4BQ2VIQ3 1234 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 CHADLQ6NUI6 762 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 CHD1LQ86WJ1 897 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 TEKT1Q969V4 418 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 NSUN4Q96CB9 384 aaKnown RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 GPATCH3Q96I76 525 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 CCDC8Q9H0W5 538 aaPredicted RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 TAOK2Q9UL54 1235 aa8.12□□□□□ -1.11
PTPRE-209ENST00000487428 TTF2Q9UNY4 1162 aaKnown RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 DDX60LQ5H9U9 1706 aaKnown RBP8.12□□□□□ -1.11
PTPRE-209ENST00000487428 GPR75-ASB3A0A0A6YYF3 556 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 UNCXA6NJT0 531 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 NEFLP07196 543 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 PRDX5P30044 214 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 CRKP46108 304 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 PPP4CP60510 307 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 TNFAIP1Q13829 316 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 DLGAP5Q15398 846 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 SPDYE2Q495Y8 402 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-209ENST00000487428 CDC37L1Q7L3B6 337 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 FAM83AQ86UY5 434 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 APOBEC3FQ8IUX4 373 aaKnown RBP8.11□□□□□ -1.11
PTPRE-209ENST00000487428 KIAA0825Q8IV33 1275 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 C16orf71Q8IYS4 520 aaPredicted RBP8.11□□□□□ -1.11
PTPRE-209ENST00000487428 PI4K2BQ8TCG2 481 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 TRPM4Q8TD43 1214 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 IDI2Q9BXS1 227 aa8.11□□□□□ -1.11
PTPRE-209ENST00000487428 MROH7-TTC4A0A0A0MT08 1334 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 MYH8P13535 1937 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 MYO1BO43795 1136 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 MX1P20591 662 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 ZAP70P43403 619 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 PDE1AP54750 535 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 MAP3K12Q12852 859 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 UBE3CQ15386 1083 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 LRRFIP1Q32MZ4 808 aaKnown RBP8.1□□□□□ -1.11
PTPRE-209ENST00000487428 CFAP100Q494V2 611 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 ANKRD45Q5TZF3 282 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 APOBEC3HQ6NTF7 200 aaKnown RBP8.1□□□□□ -1.11
PTPRE-209ENST00000487428 SAMD7Q7Z3H4 446 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 ZNF384Q8TF68 577 aa8.1□□□□□ -1.11
PTPRE-209ENST00000487428 ZBTB47Q9UFB7 747 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-209ENST00000487428 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
PTPRE-209ENST00000487428 SHTN1A0MZ66 631 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 EGFRP00533 1210 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 ZFYP08048 801 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-209ENST00000487428 PLCG2P16885 1265 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 FKBP1BP68106 108 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 MECOMQ03112 1051 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 CHAF1AQ13111 956 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-209ENST00000487428 GRIK5Q16478 980 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 ZSCAN25Q6NSZ9 544 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 PLEKHM2Q8IWE5 1019 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 KBTBD3Q8NAB2 608 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 HHIPL1Q96JK4 782 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 PRMT6Q96LA8 375 aaPredicted RBP8.09□□□□□ -1.11
PTPRE-209ENST00000487428 MXD3Q9BW11 206 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRE-209ENST00000487428 PAG1Q9NWQ8 432 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 DAGLAQ9Y4D2 1042 aa8.09□□□□□ -1.11
PTPRE-209ENST00000487428 ATRNL1Q5VV63 1379 aa8.09□□□□□ -1.12
PTPRE-209ENST00000487428 NAV1Q8NEY1 1877 aa8.09□□□□□ -1.12
PTPRE-209ENST00000487428 SIPA1L1O43166 1804 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 OTOFQ9HC10 1997 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 THSD7BQ9C0I4 1608 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 BAZ2AQ9UIF9 1905 aaKnown RBP8.08□□□□□ -1.12
PTPRE-209ENST00000487428 TCRBV5S4A2TA0A5A2 114 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 SMARCA5O60264 1052 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-209ENST00000487428 ENTPD3O75355 529 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 RHBDL3P58872 404 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 C1QTNF8P60827 252 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 MAP3K10Q02779 954 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 MAP3K11Q16584 847 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 NBPF9Q3BBW0 867 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
PTPRE-209ENST00000487428 PI16Q6UXB8 463 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 DZIP1Q86YF9 867 aaKnown RBP8.08□□□□□ -1.12
PTPRE-209ENST00000487428 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
PTPRE-209ENST00000487428 ZNF526Q8TF50 670 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms