RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 BRI3BPQ8WY22 251 aa10.7□□□□□ -0.7
HOXA9-204ENST00000487384 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
HOXA9-204ENST00000487384 MS4A4AQ96JQ5 239 aa10.7□□□□□ -0.7
HOXA9-204ENST00000487384 MYH16Q9H6N6 1097 aa10.7□□□□□ -0.7
HOXA9-204ENST00000487384 TDRD3Q9H7E2 651 aaKnown RBP10.7□□□□□ -0.7
HOXA9-204ENST00000487384 SPINK5Q9NQ38 1064 aaPredicted RBP10.7□□□□□ -0.7
HOXA9-204ENST00000487384 ZNF70Q9UC06 446 aaPredicted RBP10.7□□□□□ -0.7
HOXA9-204ENST00000487384 LAMA3Q16787 3333 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 C1QBPQ07021 282 aaKnown RBP10.69□□□□□ -0.7
HOXA9-204ENST00000487384 TNFAIP1Q13829 316 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 VGLL4Q14135 290 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 SPDYE2Q495Y8 402 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 MFSD14BQ5SR56 506 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
HOXA9-204ENST00000487384 C15orf52Q6ZUT6 534 aaKnown RBP10.69□□□□□ -0.7
HOXA9-204ENST00000487384 FAM43AQ8N2R8 423 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 SH3TC2Q8TF17 1288 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 DNAAF4Q8WXU2 420 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 OTUD5Q96G74 571 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 ARHGAP39Q9C0H5 1083 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 TMEM39BQ9GZU3 492 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 ZFYVE28Q9HCC9 887 aa10.69□□□□□ -0.7
HOXA9-204ENST00000487384 TTF2Q9UNY4 1162 aaKnown RBP10.69□□□□□ -0.7
HOXA9-204ENST00000487384 H0YGN5 161 aa10.68□□□□□ -0.7
HOXA9-204ENST00000487384 FKBP1AP62942 108 aaKnown RBP10.68□□□□□ -0.7
HOXA9-204ENST00000487384 FOXO4P98177 505 aa10.68□□□□□ -0.7
HOXA9-204ENST00000487384 TAF7LQ5H9L4 462 aa10.68□□□□□ -0.7
HOXA9-204ENST00000487384 LINS1Q8NG48 757 aa10.68□□□□□ -0.7
HOXA9-204ENST00000487384 TEPSINQ96N21 525 aa10.68□□□□□ -0.7
HOXA9-204ENST00000487384 PRKRIP1Q9H875 184 aaPredicted RBP10.68□□□□□ -0.7
HOXA9-204ENST00000487384 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
HOXA9-204ENST00000487384 F6X3S4 739 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 GYG1P46976 350 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 GTF2A2P52657 109 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 MAP3K9P80192 1104 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 ARHGEF6Q15052 776 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 LMBR1LQ6UX01 489 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 LDHAL6AQ6ZMR3 332 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 DZIP1LQ8IYY4 767 aaKnown RBP10.67□□□□□ -0.7
HOXA9-204ENST00000487384 CSADQ9Y600 493 aa10.67□□□□□ -0.7
HOXA9-204ENST00000487384 FAM205AQ6ZU69 1335 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 CRKP46108 304 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 CACNB3P54284 484 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 GRIK5Q16478 980 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 CCDC57Q2TAC2 916 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 EPHA10Q5JZY3 1008 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.66□□□□□ -0.7
HOXA9-204ENST00000487384 SERPINA10Q9UK55 444 aa10.66□□□□□ -0.7
HOXA9-204ENST00000487384 IQSEC3Q9UPP2 1182 aaPredicted RBP10.66□□□□□ -0.7
HOXA9-204ENST00000487384 MYH13Q9UKX3 1938 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 BTBD19C9JJ37 291 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 HIBADHP31937 336 aaKnown RBP10.65□□□□□ -0.7
HOXA9-204ENST00000487384 TNNI2P48788 182 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 LACTBP83111 547 aaPredicted RBP10.65□□□□□ -0.7
HOXA9-204ENST00000487384 KIF22Q14807 665 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 MTFR1Q15390 333 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 TDRD7Q8NHU6 1098 aaKnown RBP10.65□□□□□ -0.7
HOXA9-204ENST00000487384 DPF3Q92784 378 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 ZKSCAN4Q969J2 545 aaPredicted RBP10.65□□□□□ -0.7
HOXA9-204ENST00000487384 MGAMO43451 1857 aa10.65□□□□□ -0.7
HOXA9-204ENST00000487384 TLR2O60603 784 aa10.64□□□□□ -0.71
HOXA9-204ENST00000487384 WDHD1O75717 1129 aaPredicted RBP10.64□□□□□ -0.71
HOXA9-204ENST00000487384 CHAF1AQ13111 956 aaPredicted RBP10.64□□□□□ -0.71
HOXA9-204ENST00000487384 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
HOXA9-204ENST00000487384 FAM84BQ96KN1 310 aaPredicted RBP10.64□□□□□ -0.71
HOXA9-204ENST00000487384 WRNIP1Q96S55 665 aa10.64□□□□□ -0.71
HOXA9-204ENST00000487384 PUS3Q9BZE2 481 aaKnown RBP10.64□□□□□ -0.71
HOXA9-204ENST00000487384 SNCAIPQ9Y6H5 919 aa10.64□□□□□ -0.71
HOXA9-204ENST00000487384 DOCK3Q8IZD9 2030 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 CUL9Q8IWT3 2517 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 IRF6O14896 467 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 CETPP11597 493 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 UBE4AQ14139 1066 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 BEND3Q5T5X7 828 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 SHISA4Q96DD7 197 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
HOXA9-204ENST00000487384 CPA4Q9UI42 421 aa10.63□□□□□ -0.71
HOXA9-204ENST00000487384 FANCIQ9NVI1 1328 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 GRM8O00222 908 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
HOXA9-204ENST00000487384 CTGFP29279 349 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 SNAPC2Q13487 334 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 CCDC184Q52MB2 194 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 MIGA2Q7L4E1 593 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 VPS37DQ86XT2 251 aa10.62□□□□□ -0.71
HOXA9-204ENST00000487384 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.62□□□□□ -0.71
HOXA9-204ENST00000487384 C9orf78Q9NZ63 289 aaPredicted RBP10.62□□□□□ -0.71
HOXA9-204ENST00000487384 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
HOXA9-204ENST00000487384 VAMP4O75379 141 aa10.61□□□□□ -0.71
HOXA9-204ENST00000487384 FMNL1O95466 1100 aaPredicted RBP10.61□□□□□ -0.71
HOXA9-204ENST00000487384 PSMC4P43686 418 aa10.61□□□□□ -0.71
HOXA9-204ENST00000487384 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
HOXA9-204ENST00000487384 PPIL2Q13356 520 aa10.61□□□□□ -0.71
HOXA9-204ENST00000487384 CCDC27Q2M243 656 aa10.61□□□□□ -0.71
HOXA9-204ENST00000487384 SLC4A10Q6U841 1118 aa10.61□□□□□ -0.71
HOXA9-204ENST00000487384 TEKT1Q969V4 418 aa10.61□□□□□ -0.71
HOXA9-204ENST00000487384 TRIM47Q96LD4 638 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms