RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.46■□□□□ 0.87
SRRT-212ENST00000487311 MS4A4AQ96JQ5 239 aa20.46■□□□□ 0.87
SRRT-212ENST00000487311 TMEM39BQ9GZU3 492 aa20.46■□□□□ 0.87
SRRT-212ENST00000487311 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
SRRT-212ENST00000487311 ELP3Q9H9T3 547 aa20.46■□□□□ 0.87
SRRT-212ENST00000487311 UTYO14607 1347 aa20.46■□□□□ 0.87
SRRT-212ENST00000487311 POTEFA5A3E0 1075 aa20.45■□□□□ 0.86
SRRT-212ENST00000487311 CRKP46108 304 aa20.45■□□□□ 0.86
SRRT-212ENST00000487311 CD99L2Q8TCZ2 262 aa20.45■□□□□ 0.86
SRRT-212ENST00000487311 OPTNQ96CV9 577 aa20.45■□□□□ 0.86
SRRT-212ENST00000487311 RABL6Q3YEC7 729 aaPredicted RBP20.44■□□□□ 0.86
SRRT-212ENST00000487311 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
SRRT-212ENST00000487311 BRCA2P51587 3418 aa20.44■□□□□ 0.86
SRRT-212ENST00000487311 MRPL50Q8N5N7 158 aaKnown RBP20.43■□□□□ 0.86
SRRT-212ENST00000487311 KLHDC4Q8TBB5 520 aa20.43■□□□□ 0.86
SRRT-212ENST00000487311 PTPN22Q9Y2R2 807 aa20.43■□□□□ 0.86
SRRT-212ENST00000487311 LAMB1P07942 1786 aa20.43■□□□□ 0.86
SRRT-212ENST00000487311 CACNB3P54284 484 aa20.42■□□□□ 0.86
SRRT-212ENST00000487311 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
SRRT-212ENST00000487311 TNFAIP1Q13829 316 aa20.42■□□□□ 0.86
SRRT-212ENST00000487311 VGLL2Q8N8G2 317 aa20.42■□□□□ 0.86
SRRT-212ENST00000487311 MROH5Q6ZUA9 1318 aa20.42■□□□□ 0.86
SRRT-212ENST00000487311 BCAMP50895 628 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 MAP3K9P80192 1104 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 SP3Q02447 781 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 VGLL4Q14135 290 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 OTUD7BQ6GQQ9 843 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 BRI3BPQ8WY22 251 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 ERO1AQ96HE7 468 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 ZNF521Q96K83 1311 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 OTOFQ9HC10 1997 aa20.41■□□□□ 0.86
SRRT-212ENST00000487311 METTL24Q5JXM2 366 aa20.4■□□□□ 0.86
SRRT-212ENST00000487311 VPS37DQ86XT2 251 aa20.4■□□□□ 0.86
SRRT-212ENST00000487311 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.4■□□□□ 0.86
SRRT-212ENST00000487311 ZNF316A6NFI3 1004 aaPredicted RBP20.39■□□□□ 0.85
SRRT-212ENST00000487311 PDE8BO95263 885 aa20.39■□□□□ 0.85
SRRT-212ENST00000487311 USP44Q9H0E7 712 aa20.39■□□□□ 0.85
SRRT-212ENST00000487311 EFCC1Q9HA90 598 aa20.39■□□□□ 0.85
SRRT-212ENST00000487311 HDLBPQ00341 1268 aaKnown RBP20.38■□□□□ 0.85
SRRT-212ENST00000487311 APOBEC3HQ6NTF7 200 aaKnown RBP20.38■□□□□ 0.85
SRRT-212ENST00000487311 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
SRRT-212ENST00000487311 PCDH10Q9P2E7 1040 aa20.38■□□□□ 0.85
SRRT-212ENST00000487311 FRAT2O75474 233 aaPredicted RBP20.37■□□□□ 0.85
SRRT-212ENST00000487311 EN2P19622 333 aaPredicted RBP20.37■□□□□ 0.85
SRRT-212ENST00000487311 TNNI2P48788 182 aa20.37■□□□□ 0.85
SRRT-212ENST00000487311 CAVIN4Q5BKX8 364 aa20.37■□□□□ 0.85
SRRT-212ENST00000487311 INTS3Q68E01 1043 aaKnown RBP20.37■□□□□ 0.85
SRRT-212ENST00000487311 CCL15-CCL14A0A0B4J2E2 113 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 FGFR2P21802 821 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 CCL15Q16663 113 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 TEKT1Q969V4 418 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 ARMC5Q96C12 935 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 OTUD5Q96G74 571 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 ZDHHC15Q96MV8 337 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 MRIQ9BWK5 157 aa20.36■□□□□ 0.85
SRRT-212ENST00000487311 GTF2A2P52657 109 aa20.35■□□□□ 0.85
SRRT-212ENST00000487311 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SRRT-212ENST00000487311 SSH1Q8WYL5 1049 aa20.35■□□□□ 0.85
SRRT-212ENST00000487311 ZKSCAN4Q969J2 545 aaPredicted RBP20.35■□□□□ 0.85
SRRT-212ENST00000487311 SNCAIPQ9Y6H5 919 aa20.35■□□□□ 0.85
SRRT-212ENST00000487311 ARAP2Q8WZ64 1704 aa20.35■□□□□ 0.85
SRRT-212ENST00000487311 RFX5P48382 616 aaPredicted RBP20.34■□□□□ 0.85
SRRT-212ENST00000487311 TAF1CQ15572 869 aaPredicted RBP20.34■□□□□ 0.85
SRRT-212ENST00000487311 ZFYVE28Q9HCC9 887 aa20.34■□□□□ 0.85
SRRT-212ENST00000487311 CSADQ9Y600 493 aa20.34■□□□□ 0.85
SRRT-212ENST00000487311 PTPRCP08575 1304 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 SPDYE5A6NIY4 337 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 IRF6O14896 467 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 MIGA2Q7L4E1 593 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 FAM83AQ86UY5 434 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 WRNIP1Q96S55 665 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 ARHGAP39Q9C0H5 1083 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 PTCH2Q9Y6C5 1203 aa20.32■□□□□ 0.84
SRRT-212ENST00000487311 KIAA0100Q14667 2235 aaKnown RBP20.31■□□□□ 0.84
SRRT-212ENST00000487311 BTBD19C9JJ37 291 aa20.31■□□□□ 0.84
SRRT-212ENST00000487311 IFIT1P09914 478 aaKnown RBP20.31■□□□□ 0.84
SRRT-212ENST00000487311 PUM3Q15397 648 aaKnown RBP20.31■□□□□ 0.84
SRRT-212ENST00000487311 HHIPL2Q6UWX4 724 aa20.31■□□□□ 0.84
SRRT-212ENST00000487311 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
SRRT-212ENST00000487311 ERO1BQ86YB8 467 aa20.31■□□□□ 0.84
SRRT-212ENST00000487311 EYA2O00167 538 aa20.3■□□□□ 0.84
SRRT-212ENST00000487311 FKBP1CQ5VVH2 108 aa20.3■□□□□ 0.84
SRRT-212ENST00000487311 ZNF333Q96JL9 665 aa20.3■□□□□ 0.84
SRRT-212ENST00000487311 SUGT1Q9Y2Z0 365 aa20.3■□□□□ 0.84
SRRT-212ENST00000487311 TLR2O60603 784 aa20.29■□□□□ 0.84
SRRT-212ENST00000487311 SLFN5Q08AF3 891 aa20.29■□□□□ 0.84
SRRT-212ENST00000487311 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
SRRT-212ENST00000487311 CETPP11597 493 aa20.28■□□□□ 0.84
SRRT-212ENST00000487311 INPP5BP32019 993 aa20.28■□□□□ 0.84
SRRT-212ENST00000487311 LPIN2Q92539 896 aa20.28■□□□□ 0.84
SRRT-212ENST00000487311 CDCA7LQ96GN5 454 aa20.28■□□□□ 0.84
SRRT-212ENST00000487311 TMOD2Q9NZR1 351 aa20.28■□□□□ 0.84
SRRT-212ENST00000487311 ZSWIM8A7E2V4 1837 aa20.27■□□□□ 0.84
SRRT-212ENST00000487311 E9PSI1 815 aa20.27■□□□□ 0.84
SRRT-212ENST00000487311 ECM2O94769 699 aaPredicted RBP20.27■□□□□ 0.84
SRRT-212ENST00000487311 MYCP01106 439 aaPredicted RBP20.27■□□□□ 0.84
SRRT-212ENST00000487311 TCP10Q12799 353 aa20.27■□□□□ 0.84
SRRT-212ENST00000487311 SNAPC2Q13487 334 aa20.27■□□□□ 0.84
SRRT-212ENST00000487311 DIXDC1Q155Q3 683 aa20.27■□□□□ 0.84
SRRT-212ENST00000487311 CDC42EP5Q6NZY7 148 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms