RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ZDHHC16Q969W1 377 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 ADARB2Q9NS39 739 aaKnown RBP8.97□□□□□ -0.97
UBE4B-209ENST00000487244 CNOT7Q9UIV1 285 aaKnown RBP8.97□□□□□ -0.97
UBE4B-209ENST00000487244 PASKQ96RG2 1323 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 ZNF609O15014 1411 aa8.97□□□□□ -0.97
UBE4B-209ENST00000487244 PCNTO95613 3336 aa8.96□□□□□ -0.97
UBE4B-209ENST00000487244 USP17L3A6NCW0 530 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 USP17L4A6NCW7 530 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 LSM11P83369 360 aaKnown RBP eCLIP8.96□□□□□ -0.98
UBE4B-209ENST00000487244 PTPN12Q05209 780 aaKnown RBP8.96□□□□□ -0.98
UBE4B-209ENST00000487244 TBC1D10BQ4KMP7 808 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-209ENST00000487244 DACT2Q5SW24 774 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 RSBN1LQ6PCB5 846 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-209ENST00000487244 USP17L1Q7RTZ2 530 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 PODNQ7Z5L7 613 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 VGLL2Q8N8G2 317 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 KCNV2Q8TDN2 545 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 DDX12PQ92771 950 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 FBXW7Q969H0 707 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 GMLQ99445 158 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 COA1Q9GZY4 146 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 SIL1Q9H173 461 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 PA2G4Q9UQ80 394 aaKnown RBP8.96□□□□□ -0.98
UBE4B-209ENST00000487244 JAG2Q9Y219 1238 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 PCDHGA10Q9Y5H3 936 aa8.96□□□□□ -0.98
UBE4B-209ENST00000487244 ASTN2O75129 1339 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-209ENST00000487244 TRAF5O00463 557 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 RPS12P25398 132 aaKnown RBP8.95□□□□□ -0.98
UBE4B-209ENST00000487244 GYG1P46976 350 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 METTL24Q5JXM2 366 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
UBE4B-209ENST00000487244 TYW1BQ6NUM6 668 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 POTEEQ6S8J3 1075 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 DLK2Q6UY11 383 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 C15orf52Q6ZUT6 534 aaKnown RBP8.95□□□□□ -0.98
UBE4B-209ENST00000487244 USP50Q70EL3 339 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-209ENST00000487244 ATG9AQ7Z3C6 839 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 CNTROBQ8N137 903 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 PANK1Q8TE04 598 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 DPF2Q92785 391 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 KCNK17Q96T54 332 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 EPAS1Q99814 870 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 CD209Q9NNX6 404 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 MROH5Q6ZUA9 1318 aa8.95□□□□□ -0.98
UBE4B-209ENST00000487244 ECM29Q5VYK3 1845 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 H7C1D1 291 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 EYA2O00167 538 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 GNAI3P08754 354 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 PTPREP23469 700 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 PSEN2P49810 448 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 GTF2IP78347 998 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 KIF4BQ2VIQ3 1234 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 SPNS2Q8IVW8 549 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 ITPRIPQ8IWB1 547 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 FTSJ3Q8IY81 847 aaKnown RBP8.94□□□□□ -0.98
UBE4B-209ENST00000487244 DZIP1LQ8IYY4 767 aaKnown RBP8.94□□□□□ -0.98
UBE4B-209ENST00000487244 CERS5Q8N5B7 392 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 DNAJC5GQ8N7S2 189 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 YTHDC1Q96MU7 727 aaKnown RBP8.94□□□□□ -0.98
UBE4B-209ENST00000487244 GLIS2Q9BZE0 524 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-209ENST00000487244 C1orf115Q9H7X2 142 aa8.94□□□□□ -0.98
UBE4B-209ENST00000487244 PNMA6EA0A0J9YXQ4 647 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 SRGAP3O43295 1099 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 PDE8BO95263 885 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 USP17L8P0C7I0 530 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 IL1R1P14778 569 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 ZNF280AP59817 542 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-209ENST00000487244 MTX1Q13505 466 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 UBE4AQ14139 1066 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 STRIP1Q5VSL9 837 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 TTLL5Q6EMB2 1281 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 ZNF804AQ7Z570 1209 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 AGBL3Q8NEM8 1001 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 FAM84BQ96KN1 310 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-209ENST00000487244 ADAM33Q9BZ11 813 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 PGAP2Q9UHJ9 254 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 RCAN3Q9UKA8 241 aa8.93□□□□□ -0.98
UBE4B-209ENST00000487244 SCAF8Q9UPN6 1271 aaKnown RBP8.93□□□□□ -0.98
UBE4B-209ENST00000487244 IQSEC3Q9UPP2 1182 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-209ENST00000487244 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-209ENST00000487244 COL1A1P02452 1464 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-209ENST00000487244 GNAI2P04899 355 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 FGFR2P21802 821 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 BCAMP50895 628 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 PUM3Q15397 648 aaKnown RBP8.92□□□□□ -0.98
UBE4B-209ENST00000487244 KIAA0825Q8IV33 1275 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 TDRD7Q8NHU6 1098 aaKnown RBP8.92□□□□□ -0.98
UBE4B-209ENST00000487244 MYOZ2Q9NPC6 264 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 GGA3Q9NZ52 723 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 PCDHAC2Q9Y5I4 1007 aa8.92□□□□□ -0.98
UBE4B-209ENST00000487244 AOX1Q06278 1338 aa8.91□□□□□ -0.98
UBE4B-209ENST00000487244 GRXCR2A6NFK2 248 aa8.91□□□□□ -0.98
UBE4B-209ENST00000487244 ADM5C9JUS6 153 aa8.91□□□□□ -0.98
UBE4B-209ENST00000487244 F8W031 263 aaPredicted RBP8.91□□□□□ -0.98
UBE4B-209ENST00000487244 ZBTB7BO15156 539 aaPredicted RBP8.91□□□□□ -0.98
UBE4B-209ENST00000487244 CIAO1O76071 339 aa8.91□□□□□ -0.98
UBE4B-209ENST00000487244 SASH1O94885 1247 aa8.91□□□□□ -0.98
UBE4B-209ENST00000487244 HIBADHP31937 336 aaKnown RBP8.91□□□□□ -0.98
UBE4B-209ENST00000487244 SCARF1Q14162 830 aa8.91□□□□□ -0.98
UBE4B-209ENST00000487244 NBR1Q14596 966 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms