RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 TNFAIP1Q13829 316 aa23.77■■□□□ 1.4
CLIP2-206ENST00000487091 MAP3K11Q16584 847 aa23.77■■□□□ 1.4
CLIP2-206ENST00000487091 FRAT1Q92837 279 aaPredicted RBP23.77■■□□□ 1.4
CLIP2-206ENST00000487091 RNF186Q9NXI6 227 aa23.77■■□□□ 1.4
CLIP2-206ENST00000487091 ZNF70Q9UC06 446 aaPredicted RBP23.77■■□□□ 1.4
CLIP2-206ENST00000487091 ANGEL1Q9UNK9 670 aaKnown RBP23.77■■□□□ 1.4
CLIP2-206ENST00000487091 PPP1R12BO60237 982 aaPredicted RBP23.76■■□□□ 1.39
CLIP2-206ENST00000487091 MTX1Q13505 466 aa23.76■■□□□ 1.39
CLIP2-206ENST00000487091 PRKG1Q13976 671 aa23.76■■□□□ 1.39
CLIP2-206ENST00000487091 RASA3Q14644 834 aa23.76■■□□□ 1.39
CLIP2-206ENST00000487091 GRIK5Q16478 980 aa23.76■■□□□ 1.39
CLIP2-206ENST00000487091 ATP2B3Q16720 1220 aa23.76■■□□□ 1.39
CLIP2-206ENST00000487091 TDRD3Q9H7E2 651 aaKnown RBP23.76■■□□□ 1.39
CLIP2-206ENST00000487091 PA2G4Q9UQ80 394 aaKnown RBP23.76■■□□□ 1.39
CLIP2-206ENST00000487091 UNCXA6NJT0 531 aa23.75■■□□□ 1.39
CLIP2-206ENST00000487091 TRPA1O75762 1119 aa23.75■■□□□ 1.39
CLIP2-206ENST00000487091 NBPF12Q5TAG4 269 aaPredicted RBP23.74■■□□□ 1.39
CLIP2-206ENST00000487091 WDR66Q8TBY9 1149 aa23.74■■□□□ 1.39
CLIP2-206ENST00000487091 TEKT1Q969V4 418 aa23.74■■□□□ 1.39
CLIP2-206ENST00000487091 MAST3O60307 1309 aa23.74■■□□□ 1.39
CLIP2-206ENST00000487091 ZBTB22O15209 634 aa23.73■■□□□ 1.39
CLIP2-206ENST00000487091 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
CLIP2-206ENST00000487091 ZKSCAN2Q63HK3 967 aa23.73■■□□□ 1.39
CLIP2-206ENST00000487091 ZDHHC15Q96MV8 337 aa23.73■■□□□ 1.39
CLIP2-206ENST00000487091 TNNQ9UQP3 1299 aa23.73■■□□□ 1.39
CLIP2-206ENST00000487091 SSC5DA1L4H1 1573 aa23.73■■□□□ 1.39
CLIP2-206ENST00000487091 MYH13Q9UKX3 1938 aa23.72■■□□□ 1.39
CLIP2-206ENST00000487091 GNAI2P04899 355 aa23.72■■□□□ 1.39
CLIP2-206ENST00000487091 TM4SF4P48230 202 aa23.72■■□□□ 1.39
CLIP2-206ENST00000487091 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
CLIP2-206ENST00000487091 GNL3LQ9NVN8 582 aaKnown RBP23.72■■□□□ 1.39
CLIP2-206ENST00000487091 TNNI2P48788 182 aa23.71■■□□□ 1.39
CLIP2-206ENST00000487091 SLC10A4Q96EP9 437 aa23.71■■□□□ 1.39
CLIP2-206ENST00000487091 ABHD8Q96I13 439 aa23.71■■□□□ 1.39
CLIP2-206ENST00000487091 FZD1Q9UP38 647 aa23.71■■□□□ 1.39
CLIP2-206ENST00000487091 ZBED9Q6R2W3 1325 aa23.7■■□□□ 1.38
CLIP2-206ENST00000487091 SEMA3EO15041 775 aa23.7■■□□□ 1.38
CLIP2-206ENST00000487091 IREB2P48200 963 aaKnown RBP23.7■■□□□ 1.38
CLIP2-206ENST00000487091 SPRYD7Q5W111 196 aa23.7■■□□□ 1.38
CLIP2-206ENST00000487091 HHIPL2Q6UWX4 724 aa23.7■■□□□ 1.38
CLIP2-206ENST00000487091 TCP10L2B9ZVM9 353 aa23.69■■□□□ 1.38
CLIP2-206ENST00000487091 USP2O75604 605 aaPredicted RBP23.69■■□□□ 1.38
CLIP2-206ENST00000487091 SREBF2Q12772 1141 aa23.69■■□□□ 1.38
CLIP2-206ENST00000487091 TEPSINQ96N21 525 aa23.69■■□□□ 1.38
CLIP2-206ENST00000487091 APOBEC3HQ6NTF7 200 aaKnown RBP23.68■■□□□ 1.38
CLIP2-206ENST00000487091 TMEM57Q8N5G2 664 aa23.68■■□□□ 1.38
CLIP2-206ENST00000487091 DENND2AQ9ULE3 1009 aa23.68■■□□□ 1.38
CLIP2-206ENST00000487091 AKAP2Q9Y2D5 859 aa23.68■■□□□ 1.38
CLIP2-206ENST00000487091 SALL1Q9NSC2 1324 aa23.67■■□□□ 1.38
CLIP2-206ENST00000487091 PHKA1P46020 1223 aa23.67■■□□□ 1.38
CLIP2-206ENST00000487091 MKRN3Q13064 507 aaKnown RBP23.67■■□□□ 1.38
CLIP2-206ENST00000487091 FKBP1CQ5VVH2 108 aa23.67■■□□□ 1.38
CLIP2-206ENST00000487091 ANKRD13AQ8IZ07 590 aa23.67■■□□□ 1.38
CLIP2-206ENST00000487091 CLMNQ96JQ2 1002 aa23.67■■□□□ 1.38
CLIP2-206ENST00000487091 TMOD2Q9NZR1 351 aa23.67■■□□□ 1.38
CLIP2-206ENST00000487091 ZBTB48P10074 688 aaPredicted RBP23.66■■□□□ 1.38
CLIP2-206ENST00000487091 INHBEP58166 350 aa23.66■■□□□ 1.38
CLIP2-206ENST00000487091 TIMM10P62072 90 aa23.66■■□□□ 1.38
CLIP2-206ENST00000487091 CCDC102BQ68D86 513 aa23.66■■□□□ 1.38
CLIP2-206ENST00000487091 FAM83AQ86UY5 434 aa23.66■■□□□ 1.38
CLIP2-206ENST00000487091 TMEM39BQ9GZU3 492 aa23.66■■□□□ 1.38
CLIP2-206ENST00000487091 MANSC4A6NHS7 340 aaPredicted RBP23.65■■□□□ 1.38
CLIP2-206ENST00000487091 ADORA1P30542 326 aa23.65■■□□□ 1.38
CLIP2-206ENST00000487091 WNK4Q96J92 1243 aa23.65■■□□□ 1.38
CLIP2-206ENST00000487091 MCOLN1Q9GZU1 580 aa23.65■■□□□ 1.38
CLIP2-206ENST00000487091 A0A1B0GUL7 405 aa23.64■■□□□ 1.37
CLIP2-206ENST00000487091 LDHBP07195 334 aaKnown RBP23.64■■□□□ 1.37
CLIP2-206ENST00000487091 TFCP2Q12800 502 aa23.64■■□□□ 1.37
CLIP2-206ENST00000487091 DGKZQ13574 1117 aa23.64■■□□□ 1.37
CLIP2-206ENST00000487091 PDS5AQ29RF7 1337 aaKnown RBP23.63■■□□□ 1.37
CLIP2-206ENST00000487091 PNMA6EA0A0J9YXQ4 647 aa23.63■■□□□ 1.37
CLIP2-206ENST00000487091 PRDX5P30044 214 aa23.63■■□□□ 1.37
CLIP2-206ENST00000487091 CACNB3P54284 484 aa23.63■■□□□ 1.37
CLIP2-206ENST00000487091 NOM1Q5C9Z4 860 aaKnown RBP23.63■■□□□ 1.37
CLIP2-206ENST00000487091 CDAN1Q8IWY9 1227 aa23.63■■□□□ 1.37
CLIP2-206ENST00000487091 FTSJ3Q8IY81 847 aaKnown RBP23.63■■□□□ 1.37
CLIP2-206ENST00000487091 ZGPATQ8N5A5 531 aaKnown RBP23.63■■□□□ 1.37
CLIP2-206ENST00000487091 CFHR5Q9BXR6 569 aa23.63■■□□□ 1.37
CLIP2-206ENST00000487091 MVPQ14764 893 aaKnown RBP23.62■■□□□ 1.37
CLIP2-206ENST00000487091 XAGE2Q96GT9 111 aa23.62■■□□□ 1.37
CLIP2-206ENST00000487091 DAGLAQ9Y4D2 1042 aa23.62■■□□□ 1.37
CLIP2-206ENST00000487091 LAMB1P07942 1786 aa23.61■■□□□ 1.37
CLIP2-206ENST00000487091 TBC1D8O95759 1140 aa23.61■■□□□ 1.37
CLIP2-206ENST00000487091 ALDH1A1P00352 501 aa23.61■■□□□ 1.37
CLIP2-206ENST00000487091 G3BP1Q13283 466 aaKnown RBP eCLIP23.61■■□□□ 1.375e-6■■■■□ 22.5
CLIP2-206ENST00000487091 HOOK2Q96ED9 719 aa23.61■■□□□ 1.37
CLIP2-206ENST00000487091 RASGRF1Q13972 1273 aa23.6■■□□□ 1.37
CLIP2-206ENST00000487091 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.6■■□□□ 1.37
CLIP2-206ENST00000487091 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.6■■□□□ 1.37
CLIP2-206ENST00000487091 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.6■■□□□ 1.37
CLIP2-206ENST00000487091 MAP3K9P80192 1104 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 ATP8B2P98198 1209 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 POLA2Q14181 598 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 DIXDC1Q155Q3 683 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 IFNL1Q8IU54 200 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 NEUROD6Q96NK8 337 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.59■■□□□ 1.37
CLIP2-206ENST00000487091 RPAP1Q9BWH6 1393 aaPredicted RBP23.59■■□□□ 1.37
CLIP2-206ENST00000487091 OTOFQ9HC10 1997 aa23.59■■□□□ 1.37
CLIP2-206ENST00000487091 ZBTB7BO15156 539 aaPredicted RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms