RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 MCM4P33991 863 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 ECE1P42892 770 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 KCNJ4P48050 445 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 IFIT5Q13325 482 aaKnown RBP10.97□□□□□ -0.65
COL12A1-208ENST00000486533 CYP4F22Q6NT55 531 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 USP48Q86UV5 1035 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 TNS4Q8IZW8 715 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 AGBL3Q8NEM8 1001 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 FBXW7Q969H0 707 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 DCPSQ96C86 337 aaKnown RBP10.97□□□□□ -0.65
COL12A1-208ENST00000486533 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 C9orf78Q9NZ63 289 aaPredicted RBP10.97□□□□□ -0.65
COL12A1-208ENST00000486533 TLL2Q9Y6L7 1015 aa10.97□□□□□ -0.65
COL12A1-208ENST00000486533 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 GRM8O00222 908 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 CDC45O75419 566 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 SAPCD2Q86UD0 394 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 GGA3Q9NZ52 723 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 ZNF804BA4D1E1 1349 aa10.96□□□□□ -0.65
COL12A1-208ENST00000486533 USP17L8P0C7I0 530 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 FOXO4P98177 505 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 MAP2K1Q02750 393 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-208ENST00000486533 CHRNDQ07001 517 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 TAF7LQ5H9L4 462 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 LMBR1LQ6UX01 489 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 DLK2Q6UY11 383 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 TXNRD3Q86VQ6 643 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 SULF1Q8IWU6 871 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 IL27Q8NEV9 243 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 COA1Q9GZY4 146 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 WBP1LQ9NX94 342 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 PTPRCP08575 1304 aa10.95□□□□□ -0.66
COL12A1-208ENST00000486533 ADM5C9JUS6 153 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 ZBTB7BO15156 539 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 ALDH1L1O75891 902 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 HSP90AA1P07900 732 aaKnown RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 KLRK1P26718 216 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 CTCFP49711 727 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 ZNF280AP59817 542 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 CCDC57Q2TAC2 916 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 ANKRD45Q5TZF3 282 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 ASTN2O75129 1339 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 ZNF609O15014 1411 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 THSD7BQ9C0I4 1608 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 TAF5LO75529 589 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 SCARF1Q14162 830 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 EPHA10Q5JZY3 1008 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 RPAP2Q8IXW5 612 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 OGFOD1Q8N543 542 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-208ENST00000486533 GMLQ99445 158 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 MXD3Q9BW11 206 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 LNPKQ9C0E8 428 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 MYOZ2Q9NPC6 264 aa10.94□□□□□ -0.66
COL12A1-208ENST00000486533 A0A1B0GUL6 1792 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 MYO3BQ8WXR4 1341 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 AOC2O75106 756 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 HMMRO75330 724 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 LBX1P52954 281 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 HUNKP57058 714 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 DACT2Q5SW24 774 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 STRIP1Q5VSL9 837 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 ANGEL2Q5VTE6 544 aaKnown RBP10.93□□□□□ -0.66
COL12A1-208ENST00000486533 TTLL5Q6EMB2 1281 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 EFCAB3Q8N7B9 438 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 ZNF594Q96JF6 807 aaPredicted RBP10.93□□□□□ -0.66
COL12A1-208ENST00000486533 HHIPL1Q96JK4 782 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 CNNM1Q9NRU3 951 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 BRPF3Q9ULD4 1205 aa10.93□□□□□ -0.66
COL12A1-208ENST00000486533 ZNF646O15015 1829 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-208ENST00000486533 SNAP23O00161 211 aa10.92□□□□□ -0.66
COL12A1-208ENST00000486533 SNPHO15079 494 aa10.92□□□□□ -0.66
COL12A1-208ENST00000486533 MRE11P49959 708 aa10.92□□□□□ -0.66
COL12A1-208ENST00000486533 LDHAL6AQ6ZMR3 332 aa10.92□□□□□ -0.66
COL12A1-208ENST00000486533 C2orf69Q8N8R5 385 aa10.92□□□□□ -0.66
COL12A1-208ENST00000486533 SUCLG2Q96I99 432 aa10.92□□□□□ -0.66
COL12A1-208ENST00000486533 GBA2Q9HCG7 927 aaPredicted RBP10.92□□□□□ -0.66
COL12A1-208ENST00000486533 NBPF7P0C2Y1 421 aaPredicted RBP10.91□□□□□ -0.66
COL12A1-208ENST00000486533 MAP2K2P36507 400 aa10.91□□□□□ -0.66
COL12A1-208ENST00000486533 GTF2IP78347 998 aa10.91□□□□□ -0.66
COL12A1-208ENST00000486533 RABEP1Q15276 862 aa10.91□□□□□ -0.66
COL12A1-208ENST00000486533 INTS3Q68E01 1043 aaKnown RBP10.91□□□□□ -0.66
COL12A1-208ENST00000486533 KIAA0825Q8IV33 1275 aa10.91□□□□□ -0.66
COL12A1-208ENST00000486533 PRDM10Q9NQV6 1147 aa10.91□□□□□ -0.66
COL12A1-208ENST00000486533 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-208ENST00000486533 TRAK2O60296 914 aa10.9□□□□□ -0.66
COL12A1-208ENST00000486533 HSPA8P11142 646 aaKnown RBP10.9□□□□□ -0.66
COL12A1-208ENST00000486533 NBPF9Q3BBW0 867 aa10.9□□□□□ -0.66
COL12A1-208ENST00000486533 ZNF804AQ7Z570 1209 aa10.9□□□□□ -0.66
COL12A1-208ENST00000486533 CDCA5Q96FF9 252 aa10.9□□□□□ -0.66
COL12A1-208ENST00000486533 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
COL12A1-208ENST00000486533 CD209Q9NNX6 404 aa10.9□□□□□ -0.66
COL12A1-208ENST00000486533 SCAF8Q9UPN6 1271 aaKnown RBP10.9□□□□□ -0.66
COL12A1-208ENST00000486533 BOLA1Q9Y3E2 137 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms