RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 ARAP2Q8WZ64 1704 aa22.11■■□□□ 1.13
MCF2L-226ENST00000486210 TRIM27P14373 513 aa22.1■■□□□ 1.13
MCF2L-226ENST00000486210 SP3Q02447 781 aa22.1■■□□□ 1.13
MCF2L-226ENST00000486210 ARHGAP45Q92619 1136 aa22.1■■□□□ 1.13
MCF2L-226ENST00000486210 IFIT5Q13325 482 aaKnown RBP22.09■■□□□ 1.13
MCF2L-226ENST00000486210 ZKSCAN2Q63HK3 967 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 OTUD7BQ6GQQ9 843 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 ATF7IPQ6VMQ6 1270 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 CDAN1Q8IWY9 1227 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 OPTNQ96CV9 577 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 MS4A4AQ96JQ5 239 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 API5Q9BZZ5 524 aaKnown RBP22.09■■□□□ 1.13
MCF2L-226ENST00000486210 ELP3Q9H9T3 547 aa22.09■■□□□ 1.13
MCF2L-226ENST00000486210 IPO8O15397 1037 aaKnown RBP22.08■■□□□ 1.13
MCF2L-226ENST00000486210 SLC4A10Q6U841 1118 aa22.08■■□□□ 1.13
MCF2L-226ENST00000486210 CNKSR2Q8WXI2 1034 aa22.08■■□□□ 1.13
MCF2L-226ENST00000486210 CHMP3Q9Y3E7 222 aa22.08■■□□□ 1.13
MCF2L-226ENST00000486210 ZSWIM8A7E2V4 1837 aa22.08■■□□□ 1.12
MCF2L-226ENST00000486210 RBM5P52756 815 aaKnown RBP eCLIP22.07■■□□□ 1.12
MCF2L-226ENST00000486210 SPDYE2Q495Y8 402 aa22.07■■□□□ 1.12
MCF2L-226ENST00000486210 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
MCF2L-226ENST00000486210 BEND3Q5T5X7 828 aa22.07■■□□□ 1.12
MCF2L-226ENST00000486210 CLUAP1Q96AJ1 413 aa22.07■■□□□ 1.12
MCF2L-226ENST00000486210 ZNF594Q96JF6 807 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-226ENST00000486210 TEPSINQ96N21 525 aa22.07■■□□□ 1.12
MCF2L-226ENST00000486210 ZNF70Q9UC06 446 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-226ENST00000486210 FAM205AQ6ZU69 1335 aa22.06■■□□□ 1.12
MCF2L-226ENST00000486210 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.06■■□□□ 1.12
MCF2L-226ENST00000486210 ZNF333Q96JL9 665 aa22.06■■□□□ 1.12
MCF2L-226ENST00000486210 BRI3BPQ8WY22 251 aa22.05■■□□□ 1.12
MCF2L-226ENST00000486210 TDRD3Q9H7E2 651 aaKnown RBP22.05■■□□□ 1.12
MCF2L-226ENST00000486210 RLBP1P12271 317 aa22.04■■□□□ 1.12
MCF2L-226ENST00000486210 FXR1P51114 621 aaKnown RBP eCLIP22.04■■□□□ 1.12
MCF2L-226ENST00000486210 TAF7LQ5H9L4 462 aa22.04■■□□□ 1.12
MCF2L-226ENST00000486210 LMBR1LQ6UX01 489 aa22.04■■□□□ 1.12
MCF2L-226ENST00000486210 TDRD7Q8NHU6 1098 aaKnown RBP22.04■■□□□ 1.12
MCF2L-226ENST00000486210 PTCH2Q9Y6C5 1203 aa22.04■■□□□ 1.12
MCF2L-226ENST00000486210 RRP1P56182 461 aaKnown RBP22.03■■□□□ 1.12
MCF2L-226ENST00000486210 TNFAIP1Q13829 316 aa22.03■■□□□ 1.12
MCF2L-226ENST00000486210 MFSD14BQ5SR56 506 aa22.03■■□□□ 1.12
MCF2L-226ENST00000486210 SERPINA10Q9UK55 444 aa22.03■■□□□ 1.12
MCF2L-226ENST00000486210 TTF2Q9UNY4 1162 aaKnown RBP22.03■■□□□ 1.12
MCF2L-226ENST00000486210 VGLL4Q14135 290 aa22.02■■□□□ 1.12
MCF2L-226ENST00000486210 TAF1CQ15572 869 aaPredicted RBP22.02■■□□□ 1.12
MCF2L-226ENST00000486210 C20orf194Q5TEA3 1177 aa22.02■■□□□ 1.12
MCF2L-226ENST00000486210 LDHAL6AQ6ZMR3 332 aa22.02■■□□□ 1.12
MCF2L-226ENST00000486210 FAM43AQ8N2R8 423 aa22.02■■□□□ 1.12
MCF2L-226ENST00000486210 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.02■■□□□ 1.12
MCF2L-226ENST00000486210 SRCIN1Q9C0H9 1055 aa22.02■■□□□ 1.12
MCF2L-226ENST00000486210 TMEM39BQ9GZU3 492 aa22.02■■□□□ 1.12
MCF2L-226ENST00000486210 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
MCF2L-226ENST00000486210 CCL15-CCL14A0A0B4J2E2 113 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 TCP10L2B9ZVM9 353 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 GYG1P46976 350 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 CCL15Q16663 113 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 CCDC57Q2TAC2 916 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 DZIP1LQ8IYY4 767 aaKnown RBP22.01■■□□□ 1.11
MCF2L-226ENST00000486210 TMEM57Q8N5G2 664 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 PANK1Q8TE04 598 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 TMEM106CQ9BVX2 250 aa22.01■■□□□ 1.11
MCF2L-226ENST00000486210 C9orf78Q9NZ63 289 aaPredicted RBP22.01■■□□□ 1.11
MCF2L-226ENST00000486210 GRM8O00222 908 aa22■■□□□ 1.11
MCF2L-226ENST00000486210 GRIK5Q16478 980 aa22■■□□□ 1.11
MCF2L-226ENST00000486210 FAM84BQ96KN1 310 aaPredicted RBP22■■□□□ 1.11
MCF2L-226ENST00000486210 ZFYVE28Q9HCC9 887 aa22■■□□□ 1.11
MCF2L-226ENST00000486210 CNNM1Q9NRU3 951 aa22■■□□□ 1.11
MCF2L-226ENST00000486210 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
MCF2L-226ENST00000486210 CRKP46108 304 aa21.99■■□□□ 1.11
MCF2L-226ENST00000486210 MAP3K9P80192 1104 aa21.99■■□□□ 1.11
MCF2L-226ENST00000486210 SLC9C1Q4G0N8 1177 aa21.99■■□□□ 1.11
MCF2L-226ENST00000486210 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-226ENST00000486210 COLQQ9Y215 455 aaPredicted RBP21.99■■□□□ 1.11
MCF2L-226ENST00000486210 HIBADHP31937 336 aaKnown RBP21.98■■□□□ 1.11
MCF2L-226ENST00000486210 GTF2A2P52657 109 aa21.98■■□□□ 1.11
MCF2L-226ENST00000486210 UBE4AQ14139 1066 aa21.98■■□□□ 1.11
MCF2L-226ENST00000486210 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
MCF2L-226ENST00000486210 OTUD5Q96G74 571 aa21.98■■□□□ 1.11
MCF2L-226ENST00000486210 PUS3Q9BZE2 481 aaKnown RBP21.98■■□□□ 1.11
MCF2L-226ENST00000486210 ARHGAP39Q9C0H5 1083 aa21.98■■□□□ 1.11
MCF2L-226ENST00000486210 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
MCF2L-226ENST00000486210 NBPF11Q86T75 865 aa21.96■■□□□ 1.11
MCF2L-226ENST00000486210 SNCAIPQ9Y6H5 919 aa21.96■■□□□ 1.11
MCF2L-226ENST00000486210 SPDYE5A6NIY4 337 aa21.95■■□□□ 1.1
MCF2L-226ENST00000486210 MYCP01106 439 aaPredicted RBP21.95■■□□□ 1.1
MCF2L-226ENST00000486210 TNNI2P48788 182 aa21.95■■□□□ 1.1
MCF2L-226ENST00000486210 SLC4A8Q2Y0W8 1093 aa21.95■■□□□ 1.1
MCF2L-226ENST00000486210 SH3TC2Q8TF17 1288 aa21.95■■□□□ 1.1
MCF2L-226ENST00000486210 KAZALD1Q96I82 304 aa21.95■■□□□ 1.1
MCF2L-226ENST00000486210 CSADQ9Y600 493 aa21.95■■□□□ 1.1
MCF2L-226ENST00000486210 TLR2O60603 784 aa21.94■■□□□ 1.1
MCF2L-226ENST00000486210 CACNB3P54284 484 aa21.94■■□□□ 1.1
MCF2L-226ENST00000486210 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
MCF2L-226ENST00000486210 ARHGEF6Q15052 776 aa21.94■■□□□ 1.1
MCF2L-226ENST00000486210 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
MCF2L-226ENST00000486210 COG6Q9Y2V7 657 aa21.94■■□□□ 1.1
MCF2L-226ENST00000486210 BTBD19C9JJ37 291 aa21.93■■□□□ 1.1
MCF2L-226ENST00000486210 NBPF7P0C2Y1 421 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-226ENST00000486210 MS4A1P11836 297 aa21.93■■□□□ 1.1
MCF2L-226ENST00000486210 LACTBP83111 547 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-226ENST00000486210 ITPRIPQ8IWB1 547 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms