RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 FAM84BQ96KN1 310 aaPredicted RBP24.53■■□□□ 1.52
CHRD-216ENST00000486066 TTF2Q9UNY4 1162 aaKnown RBP24.53■■□□□ 1.52
CHRD-216ENST00000486066 RBM5P52756 815 aaKnown RBP eCLIP24.52■■□□□ 1.52
CHRD-216ENST00000486066 UBE4AQ14139 1066 aa24.52■■□□□ 1.52
CHRD-216ENST00000486066 CCDC184Q52MB2 194 aa24.52■■□□□ 1.52
CHRD-216ENST00000486066 TMEM39BQ9GZU3 492 aa24.52■■□□□ 1.52
CHRD-216ENST00000486066 CCL15-CCL14A0A0B4J2E2 113 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 GTF2A2P52657 109 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 MAP3K9P80192 1104 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 TAF1CQ15572 869 aaPredicted RBP24.51■■□□□ 1.51
CHRD-216ENST00000486066 GRIK5Q16478 980 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 CCL15Q16663 113 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 LDHAL6AQ6ZMR3 332 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 ZFYVE28Q9HCC9 887 aa24.51■■□□□ 1.51
CHRD-216ENST00000486066 COLQQ9Y215 455 aaPredicted RBP24.51■■□□□ 1.51
CHRD-216ENST00000486066 SPDYE5A6NIY4 337 aa24.5■■□□□ 1.51
CHRD-216ENST00000486066 F6X3S4 739 aa24.5■■□□□ 1.51
CHRD-216ENST00000486066 SLC9C1Q4G0N8 1177 aa24.5■■□□□ 1.51
CHRD-216ENST00000486066 TMEM106CQ9BVX2 250 aa24.5■■□□□ 1.51
CHRD-216ENST00000486066 ZCCHC17Q9NP64 241 aaKnown RBP24.5■■□□□ 1.51
CHRD-216ENST00000486066 LAMA3Q16787 3333 aa24.5■■□□□ 1.51
CHRD-216ENST00000486066 CRKP46108 304 aa24.49■■□□□ 1.51
CHRD-216ENST00000486066 GYG1P46976 350 aa24.49■■□□□ 1.51
CHRD-216ENST00000486066 OTUD5Q96G74 571 aa24.49■■□□□ 1.51
CHRD-216ENST00000486066 SNCAIPQ9Y6H5 919 aa24.49■■□□□ 1.51
CHRD-216ENST00000486066 GRM8O00222 908 aa24.48■■□□□ 1.51
CHRD-216ENST00000486066 TLR2O60603 784 aa24.48■■□□□ 1.51
CHRD-216ENST00000486066 HIBADHP31937 336 aaKnown RBP24.48■■□□□ 1.51
CHRD-216ENST00000486066 CCDC57Q2TAC2 916 aa24.48■■□□□ 1.51
CHRD-216ENST00000486066 NBPF11Q86T75 865 aa24.48■■□□□ 1.51
CHRD-216ENST00000486066 KAZALD1Q96I82 304 aa24.48■■□□□ 1.51
CHRD-216ENST00000486066 CHMP3Q9Y3E7 222 aa24.48■■□□□ 1.51
CHRD-216ENST00000486066 TCP10L2B9ZVM9 353 aa24.47■■□□□ 1.51
CHRD-216ENST00000486066 ARHGEF6Q15052 776 aa24.47■■□□□ 1.51
CHRD-216ENST00000486066 ARHGAP39Q9C0H5 1083 aa24.47■■□□□ 1.51
CHRD-216ENST00000486066 CNNM1Q9NRU3 951 aa24.47■■□□□ 1.51
CHRD-216ENST00000486066 PLIN1O60240 522 aa24.46■■□□□ 1.51
CHRD-216ENST00000486066 LACTBP83111 547 aaPredicted RBP24.46■■□□□ 1.51
CHRD-216ENST00000486066 HDLBPQ00341 1268 aaKnown RBP24.46■■□□□ 1.51
CHRD-216ENST00000486066 FBXO33Q7Z6M2 555 aa24.46■■□□□ 1.51
CHRD-216ENST00000486066 PUS3Q9BZE2 481 aaKnown RBP24.46■■□□□ 1.51
CHRD-216ENST00000486066 RIPOR2Q9Y4F9 1068 aa24.46■■□□□ 1.51
CHRD-216ENST00000486066 COL6A3P12111 3177 aa24.46■■□□□ 1.51
CHRD-216ENST00000486066 BTBD19C9JJ37 291 aa24.44■■□□□ 1.5
CHRD-216ENST00000486066 TNNI2P48788 182 aa24.44■■□□□ 1.5
CHRD-216ENST00000486066 SHISA4Q96DD7 197 aa24.44■■□□□ 1.5
CHRD-216ENST00000486066 CSADQ9Y600 493 aa24.44■■□□□ 1.5
CHRD-216ENST00000486066 RPAP1Q9BWH6 1393 aaPredicted RBP24.43■■□□□ 1.5
CHRD-216ENST00000486066 H0YGN5 161 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 IRF6O14896 467 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 CTGFP29279 349 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 EXOSC9Q06265 439 aaKnown RBP24.43■■□□□ 1.5
CHRD-216ENST00000486066 FKBP1CQ5VVH2 108 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 ERO1BQ86YB8 467 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 SH3TC2Q8TF17 1288 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 MRIQ9BWK5 157 aa24.43■■□□□ 1.5
CHRD-216ENST00000486066 ADGRA2Q96PE1 1338 aa24.42■■□□□ 1.5
CHRD-216ENST00000486066 GNRH1P01148 92 aa24.42■■□□□ 1.5
CHRD-216ENST00000486066 CETPP11597 493 aa24.42■■□□□ 1.5
CHRD-216ENST00000486066 C17orf99Q6UX52 265 aa24.42■■□□□ 1.5
CHRD-216ENST00000486066 FAM83AQ86UY5 434 aa24.42■■□□□ 1.5
CHRD-216ENST00000486066 VGLL2Q8N8G2 317 aa24.42■■□□□ 1.5
CHRD-216ENST00000486066 A0A0C4DFX4 3053 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 UTYO14607 1347 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 ALDH1L1O75891 902 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 PPIL2Q13356 520 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 SLC4A8Q2Y0W8 1093 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 TAF7LQ5H9L4 462 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 APOBEC3HQ6NTF7 200 aaKnown RBP24.41■■□□□ 1.5
CHRD-216ENST00000486066 UBE2Q1Q7Z7E8 422 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 WDR63Q8IWG1 891 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 ZDHHC15Q96MV8 337 aa24.41■■□□□ 1.5
CHRD-216ENST00000486066 CACNB3P54284 484 aa24.4■■□□□ 1.5
CHRD-216ENST00000486066 PRMT2P55345 433 aa24.4■■□□□ 1.5
CHRD-216ENST00000486066 ZKSCAN4Q969J2 545 aaPredicted RBP24.4■■□□□ 1.5
CHRD-216ENST00000486066 SUCLG2Q96I99 432 aa24.4■■□□□ 1.5
CHRD-216ENST00000486066 MROH5Q6ZUA9 1318 aa24.39■■□□□ 1.5
CHRD-216ENST00000486066 SNAPC2Q13487 334 aa24.39■■□□□ 1.49
CHRD-216ENST00000486066 RABL6Q3YEC7 729 aaPredicted RBP24.39■■□□□ 1.49
CHRD-216ENST00000486066 WRNIP1Q96S55 665 aa24.39■■□□□ 1.49
CHRD-216ENST00000486066 SPINK5Q9NQ38 1064 aaPredicted RBP24.39■■□□□ 1.49
CHRD-216ENST00000486066 MOGSQ13724 837 aa24.38■■□□□ 1.49
CHRD-216ENST00000486066 TBC1D22AQ8WUA7 517 aa24.38■■□□□ 1.49
CHRD-216ENST00000486066 PRO3102Q9H379 93 aa24.38■■□□□ 1.49
CHRD-216ENST00000486066 MTFR1Q15390 333 aa24.37■■□□□ 1.49
CHRD-216ENST00000486066 TEKT1Q969V4 418 aa24.37■■□□□ 1.49
CHRD-216ENST00000486066 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
CHRD-216ENST00000486066 IQSEC3Q9UPP2 1182 aaPredicted RBP24.37■■□□□ 1.49
CHRD-216ENST00000486066 MGAMO43451 1857 aa24.36■■□□□ 1.49
CHRD-216ENST00000486066 MYH13Q9UKX3 1938 aa24.36■■□□□ 1.49
CHRD-216ENST00000486066 NBPF7P0C2Y1 421 aaPredicted RBP24.36■■□□□ 1.49
CHRD-216ENST00000486066 PPATQ06203 517 aa24.36■■□□□ 1.49
CHRD-216ENST00000486066 TRIM47Q96LD4 638 aa24.36■■□□□ 1.49
CHRD-216ENST00000486066 SRRDQ9UH36 339 aa24.36■■□□□ 1.49
CHRD-216ENST00000486066 KCNH4Q9UQ05 1017 aa24.36■■□□□ 1.49
CHRD-216ENST00000486066 MYCP01106 439 aaPredicted RBP24.35■■□□□ 1.49
CHRD-216ENST00000486066 KIF22Q14807 665 aa24.35■■□□□ 1.49
CHRD-216ENST00000486066 LRRC24Q50LG9 513 aa24.35■■□□□ 1.49
CHRD-216ENST00000486066 ANKRD44Q8N8A2 993 aa24.35■■□□□ 1.49
CHRD-216ENST00000486066 SRCIN1Q9C0H9 1055 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms