RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 ZNF589Q86UQ0 364 aaPredicted RBP13.65□□□□□ -0.22
SND1-212ENST00000485871 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 DBNDD1Q9H9R9 158 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 HELLSQ9NRZ9 838 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
SND1-212ENST00000485871 PPIP5K2O43314 1243 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 ECE2O60344 883 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 PRDX5P30044 214 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 IARSP41252 1262 aaKnown RBP13.64□□□□□ -0.23
SND1-212ENST00000485871 MFAP1P55081 439 aaKnown RBP13.64□□□□□ -0.23
SND1-212ENST00000485871 MAP3K12Q12852 859 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 C9orf131Q5VYM1 1079 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 ZSCAN25Q6NSZ9 544 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 CERS5Q8N5B7 392 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 RUFY2Q8WXA3 655 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.64□□□□□ -0.23
SND1-212ENST00000485871 LSG1Q9H089 658 aaKnown RBP13.64□□□□□ -0.23
SND1-212ENST00000485871 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 ZNF277Q9NRM2 450 aaPredicted RBP13.64□□□□□ -0.23
SND1-212ENST00000485871 LAMA4Q16363 1823 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 FOCADQ5VW36 1801 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 ZNF532Q9HCE3 1301 aa13.64□□□□□ -0.23
SND1-212ENST00000485871 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 M0R2C6 588 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 EPB41L2O43491 1005 aaKnown RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 FRAT2O75474 233 aaPredicted RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 FKBP1AP62942 108 aaKnown RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 GTF2IP78347 998 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 LRRFIP1Q32MZ4 808 aaKnown RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 MCMDC2Q4G0Z9 681 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 SLC9C2Q5TAH2 1124 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 ZGPATQ8N5A5 531 aaKnown RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 MAGEB6Q8N7X4 407 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 NSUN4Q96CB9 384 aaKnown RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
SND1-212ENST00000485871 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 LRP2BPQ9P2M1 347 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 ABCF2Q9UG63 623 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 CCDC171Q6TFL3 1326 aa13.63□□□□□ -0.23
SND1-212ENST00000485871 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 FOXP2O15409 715 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 REC8O95072 547 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 RASSF7Q02833 373 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 MECOMQ03112 1051 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 DACT2Q5SW24 774 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
SND1-212ENST00000485871 CCDC129Q6ZRS4 1044 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 TBC1D32Q96NH3 1257 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 RRAGCQ9HB90 399 aa13.62□□□□□ -0.23
SND1-212ENST00000485871 HSPA1AP0DMV8 641 aaKnown RBP13.61□□□□□ -0.23
SND1-212ENST00000485871 HSPA1BP0DMV9 641 aaKnown RBP13.61□□□□□ -0.23
SND1-212ENST00000485871 RBM25P49756 843 aaKnown RBP13.61□□□□□ -0.23
SND1-212ENST00000485871 PTH1RQ03431 593 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 MFSD14BQ5SR56 506 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 STRIP1Q5VSL9 837 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
SND1-212ENST00000485871 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 LARGE2Q8N3Y3 721 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 SMC1BQ8NDV3 1235 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 RAI14Q9P0K7 980 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
SND1-212ENST00000485871 SUGT1Q9Y2Z0 365 aa13.61□□□□□ -0.23
SND1-212ENST00000485871 DDX60LQ5H9U9 1706 aaKnown RBP13.61□□□□□ -0.23
SND1-212ENST00000485871 LDHBP07195 334 aaKnown RBP13.6□□□□□ -0.23
SND1-212ENST00000485871 MAP4K1Q92918 833 aa13.6□□□□□ -0.23
SND1-212ENST00000485871 MXD3Q9BW11 206 aa13.6□□□□□ -0.23
SND1-212ENST00000485871 ANO2Q9NQ90 1003 aa13.6□□□□□ -0.23
SND1-212ENST00000485871 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
SND1-212ENST00000485871 LAMB1P07942 1786 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 USP17L3A6NCW0 530 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 USP17L4A6NCW7 530 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 G3V3G9 751 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 GPAA1O43292 621 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 CYP7A1P22680 504 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 NAA16Q6N069 864 aaPredicted RBP13.59□□□□□ -0.23
SND1-212ENST00000485871 USP17L1Q7RTZ2 530 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
SND1-212ENST00000485871 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
SND1-212ENST00000485871 RIOK1Q9BRS2 568 aaKnown RBP13.59□□□□□ -0.23
SND1-212ENST00000485871 DSCC1Q9BVC3 393 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 C22orf23Q9BZE7 217 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 ZNRF3Q9ULT6 936 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 GAKO14976 1311 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 NAV1Q8NEY1 1877 aa13.59□□□□□ -0.23
SND1-212ENST00000485871 VIL1P09327 827 aaKnown RBP13.58□□□□□ -0.24
SND1-212ENST00000485871 HSPA4P34932 840 aa13.58□□□□□ -0.24
SND1-212ENST00000485871 NIM1KQ8IY84 436 aa13.58□□□□□ -0.24
SND1-212ENST00000485871 KCNB2Q92953 911 aa13.58□□□□□ -0.24
SND1-212ENST00000485871 GMLQ99445 158 aa13.58□□□□□ -0.24
SND1-212ENST00000485871 KIF2CQ99661 725 aa13.58□□□□□ -0.24
SND1-212ENST00000485871 MBD4O95243 580 aa13.57□□□□□ -0.24
SND1-212ENST00000485871 HSPD1P10809 573 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms