RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 RGMBQ6NW40 437 aa22.76■■□□□ 1.23
COL1A1-206ENST00000485870 CEP85Q6P2H3 762 aa22.76■■□□□ 1.23
COL1A1-206ENST00000485870 MOB2Q70IA6 237 aa22.76■■□□□ 1.23
COL1A1-206ENST00000485870 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
COL1A1-206ENST00000485870 TDRD3Q9H7E2 651 aaKnown RBP22.76■■□□□ 1.23
COL1A1-206ENST00000485870 SURF6O75683 361 aaKnown RBP22.75■■□□□ 1.23
COL1A1-206ENST00000485870 FKBP1BP68106 108 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 TEKT1Q969V4 418 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 AIDAQ96BJ3 306 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 WBP1LQ9NX94 342 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 ZNF70Q9UC06 446 aaPredicted RBP22.75■■□□□ 1.23
COL1A1-206ENST00000485870 DENND2AQ9ULE3 1009 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 SUGT1Q9Y2Z0 365 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 MAST3O60307 1309 aa22.75■■□□□ 1.23
COL1A1-206ENST00000485870 SEMA3EO15041 775 aa22.74■■□□□ 1.23
COL1A1-206ENST00000485870 FOXN1O15353 648 aa22.74■■□□□ 1.23
COL1A1-206ENST00000485870 ZNF157P51786 506 aaPredicted RBP22.74■■□□□ 1.23
COL1A1-206ENST00000485870 HDLBPQ00341 1268 aaKnown RBP22.74■■□□□ 1.23
COL1A1-206ENST00000485870 MAP2K1Q02750 393 aaPredicted RBP22.74■■□□□ 1.23
COL1A1-206ENST00000485870 SPDYE2Q495Y8 402 aa22.74■■□□□ 1.23
COL1A1-206ENST00000485870 DDX19BQ9UMR2 479 aa22.74■■□□□ 1.23
COL1A1-206ENST00000485870 MAP2K2P36507 400 aa22.73■■□□□ 1.23
COL1A1-206ENST00000485870 RASGRF1Q13972 1273 aa22.73■■□□□ 1.23
COL1A1-206ENST00000485870 PRKG1Q13976 671 aa22.73■■□□□ 1.23
COL1A1-206ENST00000485870 GORABQ5T7V8 394 aa22.73■■□□□ 1.23
COL1A1-206ENST00000485870 PPP2R3BQ9Y5P8 575 aa22.73■■□□□ 1.23
COL1A1-206ENST00000485870 UBE2Q2LH0YL09 131 aa22.72■■□□□ 1.23
COL1A1-206ENST00000485870 PRDX5P30044 214 aa22.72■■□□□ 1.23
COL1A1-206ENST00000485870 C20orf194Q5TEA3 1177 aa22.72■■□□□ 1.23
COL1A1-206ENST00000485870 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.72■■□□□ 1.23
COL1A1-206ENST00000485870 NOGQ13253 232 aa22.71■■□□□ 1.23
COL1A1-206ENST00000485870 RASA3Q14644 834 aa22.71■■□□□ 1.23
COL1A1-206ENST00000485870 ZDHHC15Q96MV8 337 aa22.71■■□□□ 1.23
COL1A1-206ENST00000485870 ZIC5Q96T25 663 aa22.71■■□□□ 1.23
COL1A1-206ENST00000485870 NOP58Q9Y2X3 529 aaKnown RBP22.71■■□□□ 1.23
COL1A1-206ENST00000485870 FAM155AB1AL88 458 aaPredicted RBP22.7■■□□□ 1.22
COL1A1-206ENST00000485870 TCP10L2B9ZVM9 353 aa22.7■■□□□ 1.22
COL1A1-206ENST00000485870 LDHBP07195 334 aaKnown RBP22.7■■□□□ 1.22
COL1A1-206ENST00000485870 TNFAIP1Q13829 316 aa22.7■■□□□ 1.22
COL1A1-206ENST00000485870 CCDC102AQ96A19 550 aa22.7■■□□□ 1.22
COL1A1-206ENST00000485870 MRIQ9BWK5 157 aa22.7■■□□□ 1.22
COL1A1-206ENST00000485870 FZD1Q9UP38 647 aa22.7■■□□□ 1.22
COL1A1-206ENST00000485870 SALL1Q9NSC2 1324 aa22.7■■□□□ 1.22
COL1A1-206ENST00000485870 SSC5DA1L4H1 1573 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 SLC10A3P09131 477 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 CACNB3P54284 484 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 DIXDC1Q155Q3 683 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 TNNI3KQ59H18 835 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 HHIPL2Q6UWX4 724 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 ARMC9Q7Z3E5 817 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 ZBTB40Q9NUA8 1239 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 FPGT-TNNI3KV9GXZ4 949 aa22.69■■□□□ 1.22
COL1A1-206ENST00000485870 ZBTB22O15209 634 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 PDE3AQ14432 1141 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 NBPF12Q5TAG4 269 aaPredicted RBP22.68■■□□□ 1.22
COL1A1-206ENST00000485870 APOBEC3HQ6NTF7 200 aaKnown RBP22.68■■□□□ 1.22
COL1A1-206ENST00000485870 RASAL3Q86YV0 1011 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 BEGAINQ9BUH8 593 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 GPR108Q9NPR9 543 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 ABCF2Q9UG63 623 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 ANGEL1Q9UNK9 670 aaKnown RBP22.68■■□□□ 1.22
COL1A1-206ENST00000485870 EXOC6BQ9Y2D4 811 aa22.68■■□□□ 1.22
COL1A1-206ENST00000485870 PDS5AQ29RF7 1337 aaKnown RBP22.67■■□□□ 1.22
COL1A1-206ENST00000485870 CTCFP49711 727 aaPredicted RBP22.67■■□□□ 1.22
COL1A1-206ENST00000485870 SUPT20HL1Q3ZLR7 823 aa22.67■■□□□ 1.22
COL1A1-206ENST00000485870 COL13A1Q5TAT6 717 aaPredicted RBP22.67■■□□□ 1.22
COL1A1-206ENST00000485870 ZGPATQ8N5A5 531 aaKnown RBP22.67■■□□□ 1.22
COL1A1-206ENST00000485870 TMOD2Q9NZR1 351 aa22.67■■□□□ 1.22
COL1A1-206ENST00000485870 DAGLAQ9Y4D2 1042 aa22.67■■□□□ 1.22
COL1A1-206ENST00000485870 TNNI2P48788 182 aa22.66■■□□□ 1.22
COL1A1-206ENST00000485870 KIF23Q02241 960 aaPredicted RBP22.66■■□□□ 1.22
COL1A1-206ENST00000485870 PI16Q6UXB8 463 aa22.66■■□□□ 1.22
COL1A1-206ENST00000485870 DBNDD2Q9BQY9 259 aa22.66■■□□□ 1.22
COL1A1-206ENST00000485870 CHMP4BQ9H444 224 aaKnown RBP22.66■■□□□ 1.22
COL1A1-206ENST00000485870 HMG20BQ9P0W2 317 aa22.66■■□□□ 1.22
COL1A1-206ENST00000485870 PPP1R12BO60237 982 aaPredicted RBP22.65■■□□□ 1.22
COL1A1-206ENST00000485870 ARID4AP29374 1257 aaPredicted RBP22.65■■□□□ 1.22
COL1A1-206ENST00000485870 DZIP1Q86YF9 867 aaKnown RBP22.65■■□□□ 1.22
COL1A1-206ENST00000485870 CDAN1Q8IWY9 1227 aa22.65■■□□□ 1.22
COL1A1-206ENST00000485870 SPATA5Q8NB90 893 aa22.65■■□□□ 1.22
COL1A1-206ENST00000485870 TMEM39BQ9GZU3 492 aa22.65■■□□□ 1.22
COL1A1-206ENST00000485870 UQCRFS1P1P0C7P4 283 aa22.64■■□□□ 1.21
COL1A1-206ENST00000485870 HSPA8P11142 646 aaKnown RBP22.64■■□□□ 1.21
COL1A1-206ENST00000485870 TTC39AQ5SRH9 613 aa22.64■■□□□ 1.21
COL1A1-206ENST00000485870 RPAP2Q8IXW5 612 aaPredicted RBP22.64■■□□□ 1.21
COL1A1-206ENST00000485870 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.64■■□□□ 1.21
COL1A1-206ENST00000485870 MYH2Q9UKX2 1941 aa22.64■■□□□ 1.21
COL1A1-206ENST00000485870 HMMRO75330 724 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 MCAMP43121 646 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 LBX1P52954 281 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 CCDC158Q5M9N0 1113 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 SPTY2D1Q68D10 685 aaPredicted RBP22.63■■□□□ 1.21
COL1A1-206ENST00000485870 ERC1Q8IUD2 1116 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 TEPSINQ96N21 525 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 CCDC8Q9H0W5 538 aaPredicted RBP22.63■■□□□ 1.21
COL1A1-206ENST00000485870 TLR7Q9NYK1 1049 aaKnown RBP22.63■■□□□ 1.21
COL1A1-206ENST00000485870 TSKSQ9UJT2 592 aa22.63■■□□□ 1.21
COL1A1-206ENST00000485870 LDLRAD1Q5T700 205 aa22.62■■□□□ 1.21
COL1A1-206ENST00000485870 CDC42EP5Q6NZY7 148 aa22.62■■□□□ 1.21
COL1A1-206ENST00000485870 TBC1D9Q6ZT07 1266 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms