RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 NOB1Q9ULX3 412 aaKnown RBP21.46■■□□□ 1.03
SMC4-216ENST00000485645 CCER2I3L3R5 266 aa21.45■■□□□ 1.02
SMC4-216ENST00000485645 EYA2O00167 538 aa21.45■■□□□ 1.02
SMC4-216ENST00000485645 USP2O75604 605 aaPredicted RBP21.45■■□□□ 1.02
SMC4-216ENST00000485645 ALDH1A1P00352 501 aa21.45■■□□□ 1.02
SMC4-216ENST00000485645 RFX5P48382 616 aaPredicted RBP21.45■■□□□ 1.02
SMC4-216ENST00000485645 HDLBPQ00341 1268 aaKnown RBP21.45■■□□□ 1.02
SMC4-216ENST00000485645 GRIK5Q16478 980 aa21.45■■□□□ 1.02
SMC4-216ENST00000485645 NOM1Q5C9Z4 860 aaKnown RBP21.45■■□□□ 1.02
SMC4-216ENST00000485645 CFHR5Q9BXR6 569 aa21.45■■□□□ 1.02
SMC4-216ENST00000485645 KIF16BQ96L93 1317 aa21.45■■□□□ 1.02
SMC4-216ENST00000485645 GPR25O00155 361 aa21.44■■□□□ 1.02
SMC4-216ENST00000485645 UBTFL1P0CB47 393 aaPredicted RBP21.44■■□□□ 1.02
SMC4-216ENST00000485645 FGFR2P21802 821 aa21.44■■□□□ 1.02
SMC4-216ENST00000485645 TNNI2P48788 182 aa21.44■■□□□ 1.02
SMC4-216ENST00000485645 ANKRD13AQ8IZ07 590 aa21.44■■□□□ 1.02
SMC4-216ENST00000485645 WNK4Q96J92 1243 aa21.44■■□□□ 1.02
SMC4-216ENST00000485645 TCP10L2B9ZVM9 353 aa21.43■■□□□ 1.02
SMC4-216ENST00000485645 SLC5A1P13866 664 aa21.43■■□□□ 1.02
SMC4-216ENST00000485645 PKN2Q16513 984 aaKnown RBP21.43■■□□□ 1.02
SMC4-216ENST00000485645 TEKT1Q969V4 418 aa21.43■■□□□ 1.02
SMC4-216ENST00000485645 API5Q9BZZ5 524 aaKnown RBP21.43■■□□□ 1.02
SMC4-216ENST00000485645 IFNL1Q8IU54 200 aa21.42■■□□□ 1.02
SMC4-216ENST00000485645 LPIN2Q92539 896 aa21.42■■□□□ 1.02
SMC4-216ENST00000485645 HDAC5Q9UQL6 1122 aa21.42■■□□□ 1.02
SMC4-216ENST00000485645 FKTNO75072 461 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 ATG9AQ7Z3C6 839 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 TEPSINQ96N21 525 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 MRIQ9BWK5 157 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 TMEM39BQ9GZU3 492 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 R3HDMLQ9H3Y0 253 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 FBXO3Q9UK99 471 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 SUGT1Q9Y2Z0 365 aa21.41■■□□□ 1.02
SMC4-216ENST00000485645 MAST3O60307 1309 aa21.4■■□□□ 1.02
SMC4-216ENST00000485645 CDAN1Q8IWY9 1227 aa21.39■■□□□ 1.01
SMC4-216ENST00000485645 ZDHHC15Q96MV8 337 aa21.39■■□□□ 1.01
SMC4-216ENST00000485645 SIL1Q9H173 461 aa21.39■■□□□ 1.01
SMC4-216ENST00000485645 TMOD2Q9NZR1 351 aa21.39■■□□□ 1.01
SMC4-216ENST00000485645 HPS5Q9UPZ3 1129 aa21.39■■□□□ 1.01
SMC4-216ENST00000485645 CIAO1O76071 339 aa21.38■■□□□ 1.01
SMC4-216ENST00000485645 GJA5P36382 358 aa21.38■■□□□ 1.01
SMC4-216ENST00000485645 RARSP54136 660 aaKnown RBP21.38■■□□□ 1.01
SMC4-216ENST00000485645 OTUD7BQ6GQQ9 843 aa21.38■■□□□ 1.01
SMC4-216ENST00000485645 WDR66Q8TBY9 1149 aa21.38■■□□□ 1.01
SMC4-216ENST00000485645 ELP3Q9H9T3 547 aa21.38■■□□□ 1.01
SMC4-216ENST00000485645 CEP126Q9P2H0 1117 aa21.38■■□□□ 1.01
SMC4-216ENST00000485645 LRRFIP2Q9Y608 721 aaKnown RBP21.38■■□□□ 1.01
SMC4-216ENST00000485645 IGF2BP3O00425 579 aaKnown RBP eCLIP21.37■■□□□ 1.01
SMC4-216ENST00000485645 CACNB3P54284 484 aa21.37■■□□□ 1.01
SMC4-216ENST00000485645 SOX10P56693 466 aa21.37■■□□□ 1.01
SMC4-216ENST00000485645 APOBEC3HQ6NTF7 200 aaKnown RBP21.37■■□□□ 1.01
SMC4-216ENST00000485645 OPTNQ96CV9 577 aa21.37■■□□□ 1.01
SMC4-216ENST00000485645 MAP3K9P80192 1104 aa21.36■■□□□ 1.01
SMC4-216ENST00000485645 ATP2B3Q16720 1220 aa21.36■■□□□ 1.01
SMC4-216ENST00000485645 HHIPL2Q6UWX4 724 aa21.36■■□□□ 1.01
SMC4-216ENST00000485645 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.36■■□□□ 1.01
SMC4-216ENST00000485645 LAMB1P07942 1786 aa21.36■■□□□ 1.01
SMC4-216ENST00000485645 MYH13Q9UKX3 1938 aa21.35■■□□□ 1.01
SMC4-216ENST00000485645 IL15P40933 162 aaPredicted RBP21.35■■□□□ 1.01
SMC4-216ENST00000485645 FKBP1CQ5VVH2 108 aa21.35■■□□□ 1.01
SMC4-216ENST00000485645 FAM83AQ86UY5 434 aa21.35■■□□□ 1.01
SMC4-216ENST00000485645 ARHGAP45Q92619 1136 aa21.35■■□□□ 1.01
SMC4-216ENST00000485645 MEIS3Q99687 375 aa21.35■■□□□ 1.01
SMC4-216ENST00000485645 GNL3LQ9NVN8 582 aaKnown RBP21.35■■□□□ 1.01
SMC4-216ENST00000485645 OTOFQ9HC10 1997 aa21.35■■□□□ 1.01
SMC4-216ENST00000485645 TESPA1A2RU30 521 aaPredicted RBP21.34■■□□□ 1.01
SMC4-216ENST00000485645 FBXO46Q6PJ61 603 aaPredicted RBP21.34■■□□□ 1.01
SMC4-216ENST00000485645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.34■■□□□ 1.01
SMC4-216ENST00000485645 PA2G4Q9UQ80 394 aaKnown RBP21.34■■□□□ 1.01
SMC4-216ENST00000485645 CSADQ9Y600 493 aa21.34■■□□□ 1.01
SMC4-216ENST00000485645 VGLL4Q14135 290 aa21.33■■□□□ 1.01
SMC4-216ENST00000485645 HOOK2Q96ED9 719 aa21.33■■□□□ 1.01
SMC4-216ENST00000485645 COPRSQ9NQ92 184 aa21.33■■□□□ 1.01
SMC4-216ENST00000485645 GNAI3P08754 354 aa21.32■■□□□ 1
SMC4-216ENST00000485645 INTS3Q68E01 1043 aaKnown RBP21.32■■□□□ 1
SMC4-216ENST00000485645 PTPN18Q99952 460 aa21.32■■□□□ 1
SMC4-216ENST00000485645 CRHR2Q13324 411 aa21.31■■□□□ 1
SMC4-216ENST00000485645 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
SMC4-216ENST00000485645 MS4A4AQ96JQ5 239 aa21.31■■□□□ 1
SMC4-216ENST00000485645 DENND2AQ9ULE3 1009 aa21.31■■□□□ 1
SMC4-216ENST00000485645 SEMA3EO15041 775 aa21.3■■□□□ 1
SMC4-216ENST00000485645 IPO8O15397 1037 aaKnown RBP21.3■■□□□ 1
SMC4-216ENST00000485645 LDHBP07195 334 aaKnown RBP21.3■■□□□ 1
SMC4-216ENST00000485645 PRDX5P30044 214 aa21.3■■□□□ 1
SMC4-216ENST00000485645 PHKA1P46020 1223 aa21.3■■□□□ 1
SMC4-216ENST00000485645 GTF2A2P52657 109 aa21.3■■□□□ 1
SMC4-216ENST00000485645 OTUD5Q96G74 571 aa21.3■■□□□ 1
SMC4-216ENST00000485645 WRNIP1Q96S55 665 aa21.3■■□□□ 1
SMC4-216ENST00000485645 DAGLAQ9Y4D2 1042 aa21.3■■□□□ 1
SMC4-216ENST00000485645 TRIM17Q9Y577 477 aa21.3■■□□□ 1
SMC4-216ENST00000485645 RPAP1Q9BWH6 1393 aaPredicted RBP21.29■■□□□ 1
SMC4-216ENST00000485645 CCL15-CCL14A0A0B4J2E2 113 aa21.29■■□□□ 1
SMC4-216ENST00000485645 DIXDC1Q155Q3 683 aa21.29■■□□□ 1
SMC4-216ENST00000485645 CCL15Q16663 113 aa21.29■■□□□ 1
SMC4-216ENST00000485645 DCAF15Q66K64 600 aa21.29■■□□□ 1
SMC4-216ENST00000485645 FAM151AQ8WW52 585 aa21.29■■□□□ 1
SMC4-216ENST00000485645 ERO1AQ96HE7 468 aa21.29■■□□□ 1
SMC4-216ENST00000485645 SALL1Q9NSC2 1324 aa21.29■■□□□ 1
SMC4-216ENST00000485645 SPDYE5A6NIY4 337 aa21.28■■□□□ 1
SMC4-216ENST00000485645 SRGAP3O43295 1099 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms