RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 LDHBP07195 334 aaKnown RBP10.08□□□□□ -0.8
SF3A1-208ENST00000485618 PHKA1P46020 1223 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 HDLBPQ00341 1268 aaKnown RBP10.08□□□□□ -0.8
SF3A1-208ENST00000485618 LRRFIP1Q32MZ4 808 aaKnown RBP10.08□□□□□ -0.8
SF3A1-208ENST00000485618 CST9Q5W186 159 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 MICALL2Q8IY33 904 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 ZC3H15Q8WU90 426 aaKnown RBP10.08□□□□□ -0.8
SF3A1-208ENST00000485618 EAF2Q96CJ1 260 aaPredicted RBP10.08□□□□□ -0.8
SF3A1-208ENST00000485618 DBNDD2Q9BQY9 259 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 MRIQ9BWK5 157 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 COL4A1P02462 1669 aa10.08□□□□□ -0.8
SF3A1-208ENST00000485618 AOC2O75106 756 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 LDHCP07864 332 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ARID4AP29374 1257 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ADORA1P30542 326 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ZNF280AP59817 542 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 DLGAP5Q15398 846 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 DZIP1Q86YF9 867 aaKnown RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 GLIS2Q9BZE0 524 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ZNF408Q9H9D4 720 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 KCNQ5Q9NR82 932 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ECHDC1Q9NTX5 307 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ABCF2Q9UG63 623 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 TSKSQ9UJT2 592 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 DBNLQ9UJU6 430 aaKnown RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 SERPINA10Q9UK55 444 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 TTF2Q9UNY4 1162 aaKnown RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
SF3A1-208ENST00000485618 ZNF609O15014 1411 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
SF3A1-208ENST00000485618 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 ATP5JP18859 108 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 RBM5P52756 815 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3A1-208ENST00000485618 MAP3K12Q12852 859 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 RASGRF1Q13972 1273 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 CENPQQ7L2Z9 268 aaPredicted RBP10.06□□□□□ -0.8
SF3A1-208ENST00000485618 SAPCD2Q86UD0 394 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 KIAA0825Q8IV33 1275 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 TRPM4Q8TD43 1214 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 TEKT1Q969V4 418 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 GMLQ99445 158 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.8
SF3A1-208ENST00000485618 MYOZ2Q9NPC6 264 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
SF3A1-208ENST00000485618 SMARCA5O60264 1052 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-208ENST00000485618 GLRX3O76003 335 aaKnown RBP10.05□□□□□ -0.8
SF3A1-208ENST00000485618 MAP2K2P36507 400 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 NUCB1Q02818 461 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 MLLT1Q03111 559 aaPredicted RBP10.05□□□□□ -0.8
SF3A1-208ENST00000485618 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
SF3A1-208ENST00000485618 B4GALNT3Q6L9W6 998 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 ZSCAN25Q6NSZ9 544 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 CHD1LQ86WJ1 897 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 DCPSQ96C86 337 aaKnown RBP10.05□□□□□ -0.8
SF3A1-208ENST00000485618 TMOD2Q9NZR1 351 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 RAI14Q9P0K7 980 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 HMG20BQ9P0W2 317 aa10.05□□□□□ -0.8
SF3A1-208ENST00000485618 F8W031 263 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-208ENST00000485618 CA12O43570 354 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 BAG3O95817 575 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-208ENST00000485618 IGHDP01880 384 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 MX1P20591 662 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 TBC1D10BQ4KMP7 808 aaPredicted RBP10.04□□□□□ -0.8
SF3A1-208ENST00000485618 HHIPL2Q6UWX4 724 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 PPP4R2Q9NY27 417 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 JAG2Q9Y219 1238 aa10.04□□□□□ -0.8
SF3A1-208ENST00000485618 SHTN1A0MZ66 631 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 PLCG2P16885 1265 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 MCAMP43121 646 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 CRKP46108 304 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 HIRAP54198 1017 aaPredicted RBP10.03□□□□□ -0.8
SF3A1-208ENST00000485618 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 CDC37L1Q7L3B6 337 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 TICAM2Q86XR7 235 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 HHIPL1Q96JK4 782 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 ZDHHC15Q96MV8 337 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 HAUS7Q99871 368 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 LNPKQ9C0E8 428 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 A0A1B0GUL6 1792 aa10.03□□□□□ -0.8
SF3A1-208ENST00000485618 ZAP70P43403 619 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 TNNI2P48788 182 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 SCARF1Q14162 830 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 CFAP100Q494V2 611 aa10.02□□□□□ -0.81
SF3A1-208ENST00000485618 NAA16Q6N069 864 aaPredicted RBP10.02□□□□□ -0.81
SF3A1-208ENST00000485618 APOBEC3FQ8IUX4 373 aaKnown RBP10.02□□□□□ -0.81
SF3A1-208ENST00000485618 CERS5Q8N5B7 392 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms