RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 A0A0D9SFI3 127 aa21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 ZMYM1Q5SVZ6 1142 aa21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 CWC27Q6UX04 472 aaKnown RBP21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 APPBP2Q92624 585 aa21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 NSUN4Q96CB9 384 aaKnown RBP21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 FAM227BQ96M60 508 aa21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 ESYT1Q9BSJ8 1104 aa21.38■■□□□ 1.01
SMARCD3-212ENST00000485610 ZNF532Q9HCE3 1301 aa21.37■■□□□ 1.01
SMARCD3-212ENST00000485610 TCRBV5S4A2TA0A5A2 114 aa21.37■■□□□ 1.01
SMARCD3-212ENST00000485610 RAD17O75943 681 aa21.37■■□□□ 1.01
SMARCD3-212ENST00000485610 MECOMQ03112 1051 aa21.37■■□□□ 1.01
SMARCD3-212ENST00000485610 CDK5RAP2Q96SN8 1893 aa21.37■■□□□ 1.01
SMARCD3-212ENST00000485610 ECM29Q5VYK3 1845 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 FZD9O00144 591 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 PSMD14O00487 310 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 EIF5BO60841 1220 aaKnown RBP21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 CHGBP05060 677 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 GSTO1P78417 241 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 GRIK5Q16478 980 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 CIAPIN1Q6FI81 312 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 NAA16Q6N069 864 aaPredicted RBP21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 MXD3Q9BW11 206 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 BACH2Q9BYV9 841 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 HELLSQ9NRZ9 838 aa21.36■■□□□ 1.01
SMARCD3-212ENST00000485610 SGSM2O43147 1006 aa21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 VIL1P09327 827 aaKnown RBP21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 EIF6P56537 245 aaKnown RBP21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 CXCL9Q07325 125 aa21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 TNIP1Q15025 636 aa21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 RSBN1LQ6PCB5 846 aaPredicted RBP21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 ZNF384Q8TF68 577 aa21.35■■□□□ 1.01
SMARCD3-212ENST00000485610 CYP7A1P22680 504 aa21.34■■□□□ 1.01
SMARCD3-212ENST00000485610 SLFNL1Q499Z3 407 aa21.34■■□□□ 1.01
SMARCD3-212ENST00000485610 MCMDC2Q4G0Z9 681 aa21.34■■□□□ 1.01
SMARCD3-212ENST00000485610 RNF181Q9P0P0 153 aa21.34■■□□□ 1.01
SMARCD3-212ENST00000485610 FOCADQ5VW36 1801 aa21.34■■□□□ 1.01
SMARCD3-212ENST00000485610 SLF2Q8IX21 1173 aa21.33■■□□□ 1.01
SMARCD3-212ENST00000485610 OSBP2Q969R2 916 aa21.33■■□□□ 1.01
SMARCD3-212ENST00000485610 TTF2Q9UNY4 1162 aaKnown RBP21.33■■□□□ 1.01
SMARCD3-212ENST00000485610 LDHCP07864 332 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 C9orf131Q5VYM1 1079 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 IL25Q9H293 177 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 MROH7-TTC4A0A0A0MT08 1334 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 CCDC171Q6TFL3 1326 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 F8W031 263 aaPredicted RBP21.32■■□□□ 1
SMARCD3-212ENST00000485610 M0R2C6 588 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 REC8O95072 547 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 MFAP1P55081 439 aaKnown RBP21.32■■□□□ 1
SMARCD3-212ENST00000485610 AGBL3Q8NEM8 1001 aa21.32■■□□□ 1
SMARCD3-212ENST00000485610 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
SMARCD3-212ENST00000485610 PUS7LQ9H0K6 701 aaKnown RBP21.32■■□□□ 1
SMARCD3-212ENST00000485610 DIXDC1Q155Q3 683 aa21.31■■□□□ 1
SMARCD3-212ENST00000485610 ADGRA1Q86SQ6 560 aa21.31■■□□□ 1
SMARCD3-212ENST00000485610 KIAA0825Q8IV33 1275 aa21.31■■□□□ 1
SMARCD3-212ENST00000485610 GMLQ99445 158 aa21.31■■□□□ 1
SMARCD3-212ENST00000485610 GAKO14976 1311 aa21.3■■□□□ 1
SMARCD3-212ENST00000485610 RPS12P25398 132 aaKnown RBP21.3■■□□□ 1
SMARCD3-212ENST00000485610 ZNF589Q86UQ0 364 aaPredicted RBP21.3■■□□□ 1
SMARCD3-212ENST00000485610 AIDAQ96BJ3 306 aa21.3■■□□□ 1
SMARCD3-212ENST00000485610 NAV1Q8NEY1 1877 aa21.3■■□□□ 1
SMARCD3-212ENST00000485610 ZC3H4Q9UPT8 1303 aaKnown RBP21.29■■□□□ 1
SMARCD3-212ENST00000485610 MAGEB6P1A0A0J9YX57 407 aa21.29■■□□□ 1
SMARCD3-212ENST00000485610 GPAA1O43292 621 aa21.29■■□□□ 1
SMARCD3-212ENST00000485610 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
SMARCD3-212ENST00000485610 CCDC129Q6ZRS4 1044 aa21.29■■□□□ 1
SMARCD3-212ENST00000485610 TEKT1Q969V4 418 aa21.29■■□□□ 1
SMARCD3-212ENST00000485610 FAM163AQ96GL9 167 aaPredicted RBP21.29■■□□□ 1
SMARCD3-212ENST00000485610 NOL10Q9BSC4 688 aaKnown RBP21.29■■□□□ 1
SMARCD3-212ENST00000485610 LAMA4Q16363 1823 aa21.29■■□□□ 1
SMARCD3-212ENST00000485610 BAZ2AQ9UIF9 1905 aaKnown RBP21.29■■□□□ 1
SMARCD3-212ENST00000485610 MBD4O95243 580 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 SEC24BO95487 1268 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 SCNN1DP51172 638 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 HHIPL2Q6UWX4 724 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 KIAA1211Q6ZU35 1233 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 MIGA1Q8NAN2 632 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 MRIQ9BWK5 157 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 ANO2Q9NQ90 1003 aa21.28■■□□□ 1
SMARCD3-212ENST00000485610 ZBTB12Q9Y330 459 aaPredicted RBP21.28■■□□□ 1
SMARCD3-212ENST00000485610 CERS3Q8IU89 383 aa21.27■■□□□ 1
SMARCD3-212ENST00000485610 RIOK1Q9BRS2 568 aaKnown RBP21.27■■□□□ 1
SMARCD3-212ENST00000485610 SERPINA10Q9UK55 444 aa21.27■■□□□ 1
SMARCD3-212ENST00000485610 HDAC9Q9UKV0 1011 aa21.27■■□□□ 1
SMARCD3-212ENST00000485610 DAGLAQ9Y4D2 1042 aa21.27■■□□□ 1
SMARCD3-212ENST00000485610 LAMB1P07942 1786 aa21.27■□□□□ 0.99
SMARCD3-212ENST00000485610 DCAF8L1A6NGE4 600 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 BAG3O95817 575 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 CRKP46108 304 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 GPC2Q8N158 579 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 LCORLQ8N3X6 602 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 GJA3Q9Y6H8 435 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 GPR75-ASB3A0A0A6YYF3 556 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 USP17L8P0C7I0 530 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 BTDP43251 543 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 MMP14P50281 582 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 OGFOD1Q8N543 542 aa21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 STRBPQ96SI9 672 aaKnown RBP21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 LSG1Q9H089 658 aaKnown RBP21.26■□□□□ 0.99
SMARCD3-212ENST00000485610 ARMT1Q9H993 441 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms