RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 ERVK-9P63128 1117 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 SLC9A9Q8IVB4 645 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 GJD3Q8N144 294 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 OSBPL2Q9H1P3 480 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 OSBPL3Q9H4L5 887 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 ETNK1Q9HBU6 452 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 PCNTO95613 3336 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 TTC21BQ7Z4L5 1316 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 ANKRD36BQ8N2N9 1353 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 EDC4Q6P2E9 1401 aaKnown RBP7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 CD163L1Q9NR16 1453 aa7.42□□□□□ -1.22
NHLRC3-205ENST00000485407 MON2Q7Z3U7 1717 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 EIF4BP23588 611 aaKnown RBP7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 MZF1P28698 734 aaPredicted RBP7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 RACK1P63244 317 aaKnown RBP7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 BMS1Q14692 1282 aaKnown RBP7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 INTS6LQ5JSJ4 861 aaKnown RBP7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 EGFLAMQ63HQ2 1017 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 VASH1Q7L8A9 365 aaPredicted RBP7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 HS2ST1Q7LGA3 356 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 DNAJC5GQ8N7S2 189 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 FBF1Q8TES7 1133 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 EDEM1Q92611 657 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 FRMD6Q96NE9 622 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 CSRNP1Q96S65 589 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 LRFN2Q9ULH4 789 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 A0A1W2PP64 1363 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 MYOM1P52179 1685 aa7.41□□□□□ -1.22
NHLRC3-205ENST00000485407 MARCH6O60337 910 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 CTSHP09668 335 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 SH3BP2P78314 561 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 FAM196AQ6ZSG2 479 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 NOL8Q76FK4 1167 aaKnown RBP7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 KCNH5Q8NCM2 988 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 SLC4A9Q96Q91 983 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 SCHIP1Q9P0W5 487 aaPredicted RBP7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 USP19O94966 1318 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 USP31Q70CQ4 1352 aa7.4□□□□□ -1.22
NHLRC3-205ENST00000485407 NWD2Q9ULI1 1742 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 A6NJY4 79 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 CLSTN1O94985 981 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 GCP02774 474 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 PCSK2P16519 638 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 PSMA6P60900 246 aaKnown RBP7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 FOXK2Q01167 660 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 GPR162Q16538 588 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 TTC16Q8NEE8 873 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 HPS1Q92902 700 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 SPACA7Q96KW9 195 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 CFHR5Q9BXR6 569 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 GMPR2Q9P2T1 348 aaKnown RBP7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 GGT7Q9UJ14 662 aa7.39□□□□□ -1.23
NHLRC3-205ENST00000485407 USP54Q70EL1 1684 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 CPDO75976 1380 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 SIAH2O43255 324 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 ZBTB7AO95365 584 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 PDGFAP04085 211 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 NEFLP07196 543 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 ORC1Q13415 861 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 FAM26DQ5JW98 314 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 MCF2L2Q86YR7 1114 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 EHBP1Q8NDI1 1231 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 MYO19Q96H55 970 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 TMPRSS4Q9NRS4 437 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 CASZ1Q86V15 1759 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 ABCA3Q99758 1704 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 CRYBG1Q9Y4K1 1723 aa7.38□□□□□ -1.23
NHLRC3-205ENST00000485407 MAP3K5Q99683 1374 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 hCG_2014768A0A024R1R8 64 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 C11orf95C9JLR9 678 aaPredicted RBP7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 EIF1AYO14602 144 aaKnown RBP7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 ZAP70P43403 619 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 SMTNP53814 917 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 IGBP1P78318 339 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 ARID5BQ14865 1188 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 C8orf34Q49A92 452 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 ZNF746Q6NUN9 644 aaPredicted RBP7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 NLGN1Q8N2Q7 840 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 MRFAP1L1Q96HT8 127 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 SRA1Q9HD15 236 aaKnown RBP7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 PIK3C2AO00443 1686 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 SLIT3O75094 1523 aa7.37□□□□□ -1.23
NHLRC3-205ENST00000485407 ATP10DQ9P241 1426 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 AATKQ6ZMQ8 1374 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 CGNL1Q0VF96 1302 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 KIF7Q2M1P5 1343 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 PLCH1Q4KWH8 1693 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 FYB1O15117 783 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 ALDH1A1P00352 501 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 IBSPP21815 317 aaPredicted RBP7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 PTPN12Q05209 780 aaKnown RBP7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 DGKZQ13574 1117 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 TCEAL1Q15170 157 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 NFE2L2Q16236 605 aa7.36□□□□□ -1.23
NHLRC3-205ENST00000485407 PTPROQ16827 1216 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms