RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
LRIF1-202ENST00000485275 RASSF7Q02833 373 aa17.51■□□□□ 0.39
LRIF1-202ENST00000485275 MFSD14BQ5SR56 506 aa17.51■□□□□ 0.39
LRIF1-202ENST00000485275 KIF2CQ99661 725 aa17.51■□□□□ 0.39
LRIF1-202ENST00000485275 GPAA1O43292 621 aa17.5■□□□□ 0.39
LRIF1-202ENST00000485275 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
LRIF1-202ENST00000485275 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
LRIF1-202ENST00000485275 PODNQ7Z5L7 613 aa17.5■□□□□ 0.39
LRIF1-202ENST00000485275 TAOK3Q9H2K8 898 aa17.5■□□□□ 0.39
LRIF1-202ENST00000485275 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
LRIF1-202ENST00000485275 PALD1Q9ULE6 856 aa17.5■□□□□ 0.39
LRIF1-202ENST00000485275 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
LRIF1-202ENST00000485275 CYP7A1P22680 504 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
LRIF1-202ENST00000485275 DIXDC1Q155Q3 683 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 LRRFIP1Q32MZ4 808 aaKnown RBP17.48■□□□□ 0.39
LRIF1-202ENST00000485275 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 MIGA1Q8NAN2 632 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 LCORLQ8N3X6 602 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 FBXW7Q969H0 707 aa17.48■□□□□ 0.39
LRIF1-202ENST00000485275 MBD4O95243 580 aa17.47■□□□□ 0.39
LRIF1-202ENST00000485275 LDHBP07195 334 aaKnown RBP17.47■□□□□ 0.39
LRIF1-202ENST00000485275 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
LRIF1-202ENST00000485275 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
LRIF1-202ENST00000485275 LARGE2Q8N3Y3 721 aa17.47■□□□□ 0.39
LRIF1-202ENST00000485275 ZGPATQ8N5A5 531 aaKnown RBP17.47■□□□□ 0.39
LRIF1-202ENST00000485275 RIOK1Q9BRS2 568 aaKnown RBP17.47■□□□□ 0.39
LRIF1-202ENST00000485275 ARMT1Q9H993 441 aa17.47■□□□□ 0.39
LRIF1-202ENST00000485275 TAF6LQ9Y6J9 622 aa17.47■□□□□ 0.39
LRIF1-202ENST00000485275 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
LRIF1-202ENST00000485275 G3V3G9 751 aa17.46■□□□□ 0.39
LRIF1-202ENST00000485275 HSPD1P10809 573 aaKnown RBP17.46■□□□□ 0.39
LRIF1-202ENST00000485275 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.392e-10■■□□□ 12.4
LRIF1-202ENST00000485275 HSPA4P34932 840 aa17.46■□□□□ 0.39
LRIF1-202ENST00000485275 DCAF8Q5TAQ9 597 aa17.46■□□□□ 0.39
LRIF1-202ENST00000485275 DZIP1Q86YF9 867 aaKnown RBP17.46■□□□□ 0.39
LRIF1-202ENST00000485275 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
LRIF1-202ENST00000485275 RBM8AQ9Y5S9 174 aaKnown RBP17.46■□□□□ 0.39
LRIF1-202ENST00000485275 DYNLL1P63167 89 aaKnown RBP17.45■□□□□ 0.38
LRIF1-202ENST00000485275 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 STRIP1Q5VSL9 837 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 KIAA1211Q6ZU35 1233 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 STRBPQ96SI9 672 aaKnown RBP17.45■□□□□ 0.38
LRIF1-202ENST00000485275 SBF1O95248 1867 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 LAMA4Q16363 1823 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 EPB41L2O43491 1005 aaKnown RBP17.45■□□□□ 0.38
LRIF1-202ENST00000485275 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
LRIF1-202ENST00000485275 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
LRIF1-202ENST00000485275 EPB41L4AQ9HCS5 686 aaPredicted RBP17.45■□□□□ 0.38
LRIF1-202ENST00000485275 USP17L3A6NCW0 530 aa17.44■□□□□ 0.38
LRIF1-202ENST00000485275 USP17L4A6NCW7 530 aa17.44■□□□□ 0.38
LRIF1-202ENST00000485275 F8W031 263 aaPredicted RBP17.44■□□□□ 0.38
LRIF1-202ENST00000485275 PRKAB2O43741 272 aa17.44■□□□□ 0.38
LRIF1-202ENST00000485275 USP17L1Q7RTZ2 530 aa17.44■□□□□ 0.38
LRIF1-202ENST00000485275 AIDAQ96BJ3 306 aa17.44■□□□□ 0.38
LRIF1-202ENST00000485275 DSCC1Q9BVC3 393 aa17.44■□□□□ 0.38
LRIF1-202ENST00000485275 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
LRIF1-202ENST00000485275 COL9A3Q14050 684 aaPredicted RBP17.43■□□□□ 0.38
LRIF1-202ENST00000485275 AATFQ9NY61 560 aaKnown RBP eCLIP17.43■□□□□ 0.38
LRIF1-202ENST00000485275 MROH7-TTC4A0A0A0MT08 1334 aa17.43■□□□□ 0.38
LRIF1-202ENST00000485275 DICER1Q9UPY3 1922 aaKnown RBP17.43■□□□□ 0.38
LRIF1-202ENST00000485275 RAD17O75943 681 aa17.43■□□□□ 0.38
LRIF1-202ENST00000485275 GAKO14976 1311 aa17.43■□□□□ 0.38
LRIF1-202ENST00000485275 BAZ2AQ9UIF9 1905 aaKnown RBP17.42■□□□□ 0.38
LRIF1-202ENST00000485275 DDX60LQ5H9U9 1706 aaKnown RBP17.42■□□□□ 0.38
LRIF1-202ENST00000485275 MAGEB6P1A0A0J9YX57 407 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 PSMD14O00487 310 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 CREB3L3Q68CJ9 461 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 NIM1KQ8IY84 436 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 KCNB2Q92953 911 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 IL17RAQ96F46 866 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 SNX14Q9Y5W7 946 aa17.42■□□□□ 0.38
LRIF1-202ENST00000485275 SLC27A2O14975 620 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 SCNN1DP51172 638 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 FKBP1AP62942 108 aaKnown RBP17.41■□□□□ 0.38
LRIF1-202ENST00000485275 KIAA0825Q8IV33 1275 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 SDR42E1Q8WUS8 393 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 TTF2Q9UNY4 1162 aaKnown RBP17.41■□□□□ 0.38
LRIF1-202ENST00000485275 SUGT1Q9Y2Z0 365 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 PCDHAC2Q9Y5I4 1007 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 FOCADQ5VW36 1801 aa17.41■□□□□ 0.38
LRIF1-202ENST00000485275 GSG1L2A8MUP6 293 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 CYP21A2P08686 494 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 DAGLAQ9Y4D2 1042 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 NAV1Q8NEY1 1877 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 IGSF3O75054 1194 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 FGAP02671 866 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 CXCL9Q07325 125 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 ADCK5Q3MIX3 580 aa17.4■□□□□ 0.38
LRIF1-202ENST00000485275 ZBTB12Q9Y330 459 aaPredicted RBP17.4■□□□□ 0.38
LRIF1-202ENST00000485275 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.37
LRIF1-202ENST00000485275 LAMB1P07942 1786 aa17.39■□□□□ 0.37
LRIF1-202ENST00000485275 VIL1P09327 827 aaKnown RBP17.39■□□□□ 0.37
LRIF1-202ENST00000485275 BTDP43251 543 aa17.39■□□□□ 0.37
LRIF1-202ENST00000485275 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms