RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 ALPK3Q96L96 1907 aa8.31□□□□□ -1.08
CAPN13-206ENST00000485248 DIAPH1O60610 1272 aaKnown RBP8.3□□□□□ -1.08
CAPN13-206ENST00000485248 CETPP11597 493 aa8.3□□□□□ -1.08
CAPN13-206ENST00000485248 PSEN1P49768 467 aa8.3□□□□□ -1.08
CAPN13-206ENST00000485248 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
CAPN13-206ENST00000485248 FAM43AQ8N2R8 423 aa8.3□□□□□ -1.08
CAPN13-206ENST00000485248 ATXN2LQ8WWM7 1075 aaKnown RBP8.3□□□□□ -1.08
CAPN13-206ENST00000485248 C11orf49Q9H6J7 331 aa8.3□□□□□ -1.08
CAPN13-206ENST00000485248 PRKAG2Q9UGJ0 569 aa8.3□□□□□ -1.08
CAPN13-206ENST00000485248 U2SURPO15042 1029 aaKnown RBP8.29□□□□□ -1.08
CAPN13-206ENST00000485248 DLGAP5Q15398 846 aa8.29□□□□□ -1.08
CAPN13-206ENST00000485248 BRI3BPQ8WY22 251 aa8.29□□□□□ -1.08
CAPN13-206ENST00000485248 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
CAPN13-206ENST00000485248 VEZTQ9HBM0 779 aa8.29□□□□□ -1.08
CAPN13-206ENST00000485248 THEGQ9P2T0 379 aa8.29□□□□□ -1.08
CAPN13-206ENST00000485248 ADGRA2Q96PE1 1338 aa8.29□□□□□ -1.08
CAPN13-206ENST00000485248 SSC5DA1L4H1 1573 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 CEMIPQ8WUJ3 1361 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 ADCY3O60266 1144 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 INHAP05111 366 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 GJA5P36382 358 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 PRKCZQ05513 592 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 CELF1Q92879 486 aaKnown RBP8.28□□□□□ -1.08
CAPN13-206ENST00000485248 GMLQ99445 158 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 TSPYL2Q9H2G4 693 aaPredicted RBP8.28□□□□□ -1.08
CAPN13-206ENST00000485248 CPA4Q9UI42 421 aa8.28□□□□□ -1.08
CAPN13-206ENST00000485248 MRPS5P82675 430 aaKnown RBP8.27□□□□□ -1.09
CAPN13-206ENST00000485248 SNAPC2Q13487 334 aa8.27□□□□□ -1.09
CAPN13-206ENST00000485248 TNFAIP1Q13829 316 aa8.27□□□□□ -1.09
CAPN13-206ENST00000485248 TMEM31Q5JXX7 168 aa8.27□□□□□ -1.09
CAPN13-206ENST00000485248 KIAA0825Q8IV33 1275 aa8.27□□□□□ -1.09
CAPN13-206ENST00000485248 DIS3LQ8TF46 1054 aaKnown RBP8.27□□□□□ -1.09
CAPN13-206ENST00000485248 MS4A4AQ96JQ5 239 aa8.27□□□□□ -1.09
CAPN13-206ENST00000485248 ECM29Q5VYK3 1845 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 OTOFQ9HC10 1997 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
CAPN13-206ENST00000485248 MRE11P49959 708 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
CAPN13-206ENST00000485248 STRIP1Q5VSL9 837 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 PPM1EQ8WY54 764 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 ASB2Q96Q27 587 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 GAS2L1Q99501 681 aaPredicted RBP8.26□□□□□ -1.09
CAPN13-206ENST00000485248 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 ZNF804BA4D1E1 1349 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 XDHP47989 1333 aa8.26□□□□□ -1.09
CAPN13-206ENST00000485248 DDX60LQ5H9U9 1706 aaKnown RBP8.26□□□□□ -1.09
CAPN13-206ENST00000485248 COL2A1P02458 1487 aaPredicted RBP8.26□□□□□ -1.09
CAPN13-206ENST00000485248 USP2O75604 605 aaPredicted RBP8.25□□□□□ -1.09
CAPN13-206ENST00000485248 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
CAPN13-206ENST00000485248 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
CAPN13-206ENST00000485248 NBPF12Q5TAG4 269 aaPredicted RBP8.25□□□□□ -1.09
CAPN13-206ENST00000485248 NLRP10Q86W26 655 aa8.25□□□□□ -1.09
CAPN13-206ENST00000485248 PXYLP1Q8TE99 480 aa8.25□□□□□ -1.09
CAPN13-206ENST00000485248 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
CAPN13-206ENST00000485248 CRISPLD2Q9H0B8 497 aa8.25□□□□□ -1.09
CAPN13-206ENST00000485248 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.25□□□□□ -1.09
CAPN13-206ENST00000485248 PAK6Q9NQU5 681 aaPredicted RBP8.25□□□□□ -1.09
CAPN13-206ENST00000485248 KNSTRNQ9Y448 316 aa8.25□□□□□ -1.09
CAPN13-206ENST00000485248 CLRN2A0PK11 232 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 BTBD19C9JJ37 291 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 TNPO2O14787 897 aaKnown RBP8.24□□□□□ -1.09
CAPN13-206ENST00000485248 ELNP15502 786 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 MAP3K9P80192 1104 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 DACT2Q5SW24 774 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 C17orf99Q6UX52 265 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 EFCAB3Q8N7B9 438 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
CAPN13-206ENST00000485248 PNISRQ8TF01 805 aaKnown RBP8.24□□□□□ -1.09
CAPN13-206ENST00000485248 PARK7Q99497 189 aaKnown RBP8.24□□□□□ -1.09
CAPN13-206ENST00000485248 LRFN3Q9BTN0 628 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 MXD3Q9BW11 206 aa8.24□□□□□ -1.09
CAPN13-206ENST00000485248 MGAMO43451 1857 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 TNNI2P48788 182 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 FLT3LGP49771 235 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 SMAD3P84022 425 aaKnown RBP8.23□□□□□ -1.09
CAPN13-206ENST00000485248 FOXK2Q01167 660 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 VGLL4Q14135 290 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 MFSD10Q14728 455 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 SF3B3Q15393 1217 aaKnown RBP8.23□□□□□ -1.09
CAPN13-206ENST00000485248 TTLL5Q6EMB2 1281 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 MCM10Q7L590 875 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 ERO1BQ86YB8 467 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 GPIHBP1Q8IV16 184 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 KRI1Q8N9T8 703 aaKnown RBP8.23□□□□□ -1.09
CAPN13-206ENST00000485248 MTMR14Q8NCE2 650 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 COA7Q96BR5 231 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 ARID3AQ99856 593 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 HMX1Q9NP08 348 aaPredicted RBP8.23□□□□□ -1.09
CAPN13-206ENST00000485248 KCNH4Q9UQ05 1017 aa8.23□□□□□ -1.09
CAPN13-206ENST00000485248 MED23Q9ULK4 1368 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 SPDYE5A6NIY4 337 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 CCER2I3L3R5 266 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 PDHXO00330 501 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 AIMP1Q12904 312 aaKnown RBP8.22□□□□□ -1.09
CAPN13-206ENST00000485248 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
CAPN13-206ENST00000485248 AAK1Q2M2I8 961 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 COA1Q9GZY4 146 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 PANK3Q9H999 370 aa8.22□□□□□ -1.09
CAPN13-206ENST00000485248 GABRQQ9UN88 632 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms