RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 CHMP3Q9Y3E7 222 aa19.45■□□□□ 0.7
HLA-DQB1-208ENST00000484729 SPDYE2Q495Y8 402 aa19.44■□□□□ 0.7
HLA-DQB1-208ENST00000484729 FAM9BQ8IZU0 186 aa19.44■□□□□ 0.7
HLA-DQB1-208ENST00000484729 TEPSINQ96N21 525 aa19.44■□□□□ 0.7
HLA-DQB1-208ENST00000484729 ARHGAP39Q9C0H5 1083 aa19.44■□□□□ 0.7
HLA-DQB1-208ENST00000484729 TCP10L2B9ZVM9 353 aa19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 F6X3S4 739 aa19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 IFIT5Q13325 482 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 VGLL4Q14135 290 aa19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 ARHGEF6Q15052 776 aa19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 OTUD5Q96G74 571 aa19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 TMEM39BQ9GZU3 492 aa19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
HLA-DQB1-208ENST00000484729 A0A1B0GUL6 1792 aa19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 ZSWIM8A7E2V4 1837 aa19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 ECM2O94769 699 aaPredicted RBP19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 GTF2A2P52657 109 aa19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 FOXO4P98177 505 aa19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 TNFAIP1Q13829 316 aa19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 ZNF594Q96JF6 807 aaPredicted RBP19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 TTF2Q9UNY4 1162 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB1-208ENST00000484729 MAP3K9P80192 1104 aa19.41■□□□□ 0.7
HLA-DQB1-208ENST00000484729 MFSD14BQ5SR56 506 aa19.41■□□□□ 0.7
HLA-DQB1-208ENST00000484729 SZT2Q5T011 3432 aa19.41■□□□□ 0.7
HLA-DQB1-208ENST00000484729 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
HLA-DQB1-208ENST00000484729 CHRDL2Q6WN34 429 aa19.4■□□□□ 0.7
HLA-DQB1-208ENST00000484729 DZIP1LQ8IYY4 767 aaKnown RBP19.4■□□□□ 0.7
HLA-DQB1-208ENST00000484729 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.4■□□□□ 0.7
HLA-DQB1-208ENST00000484729 SERPINA10Q9UK55 444 aa19.4■□□□□ 0.7
HLA-DQB1-208ENST00000484729 FAM205AQ6ZU69 1335 aa19.4■□□□□ 0.7
HLA-DQB1-208ENST00000484729 EPHA10Q5JZY3 1008 aa19.39■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CSADQ9Y600 493 aa19.39■□□□□ 0.69
HLA-DQB1-208ENST00000484729 GYG1P46976 350 aa19.38■□□□□ 0.69
HLA-DQB1-208ENST00000484729 LACTBP83111 547 aaPredicted RBP19.38■□□□□ 0.69
HLA-DQB1-208ENST00000484729 GRIK5Q16478 980 aa19.38■□□□□ 0.69
HLA-DQB1-208ENST00000484729 LMBR1LQ6UX01 489 aa19.38■□□□□ 0.69
HLA-DQB1-208ENST00000484729 LDHAL6AQ6ZMR3 332 aa19.38■□□□□ 0.69
HLA-DQB1-208ENST00000484729 TDRD7Q8NHU6 1098 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB1-208ENST00000484729 TLR2O60603 784 aa19.37■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CRKP46108 304 aa19.37■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CACNB3P54284 484 aa19.37■□□□□ 0.69
HLA-DQB1-208ENST00000484729 KIF22Q14807 665 aa19.37■□□□□ 0.69
HLA-DQB1-208ENST00000484729 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CNNM1Q9NRU3 951 aa19.37■□□□□ 0.69
HLA-DQB1-208ENST00000484729 SPDYE5A6NIY4 337 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 BTBD19C9JJ37 291 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 GRM8O00222 908 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 MTFR1Q15390 333 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 SLC4A10Q6U841 1118 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 DPF3Q92784 378 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 SHISA4Q96DD7 197 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 RBM27Q9P2N5 1060 aaKnown RBP19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 SNCAIPQ9Y6H5 919 aa19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 RANBP2P49792 3224 aaKnown RBP19.36■□□□□ 0.69
HLA-DQB1-208ENST00000484729 ARAP2Q8WZ64 1704 aa19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CETPP11597 493 aa19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 HIBADHP31937 336 aaKnown RBP19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 TNNI2P48788 182 aa19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CCDC57Q2TAC2 916 aa19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 ZKSCAN4Q969J2 545 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 FAM84BQ96KN1 310 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 C9orf78Q9NZ63 289 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB1-208ENST00000484729 IRF6O14896 467 aa19.34■□□□□ 0.69
HLA-DQB1-208ENST00000484729 WDHD1O75717 1129 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-208ENST00000484729 CTGFP29279 349 aa19.34■□□□□ 0.69
HLA-DQB1-208ENST00000484729 IQSEC3Q9UPP2 1182 aaPredicted RBP19.34■□□□□ 0.69
HLA-DQB1-208ENST00000484729 ALDH1L1O75891 902 aa19.33■□□□□ 0.68
HLA-DQB1-208ENST00000484729 ERO1BQ86YB8 467 aa19.33■□□□□ 0.68
HLA-DQB1-208ENST00000484729 WRNIP1Q96S55 665 aa19.33■□□□□ 0.68
HLA-DQB1-208ENST00000484729 PUS3Q9BZE2 481 aaKnown RBP19.33■□□□□ 0.68
HLA-DQB1-208ENST00000484729 SRCIN1Q9C0H9 1055 aa19.33■□□□□ 0.68
HLA-DQB1-208ENST00000484729 CACNA1FO60840 1977 aa19.33■□□□□ 0.68
HLA-DQB1-208ENST00000484729 SNAPC2Q13487 334 aa19.32■□□□□ 0.68
HLA-DQB1-208ENST00000484729 UBE4AQ14139 1066 aa19.32■□□□□ 0.68
HLA-DQB1-208ENST00000484729 CPA4Q9UI42 421 aa19.32■□□□□ 0.68
HLA-DQB1-208ENST00000484729 PSMC4P43686 418 aa19.31■□□□□ 0.68
HLA-DQB1-208ENST00000484729 CHAF1AQ13111 956 aaPredicted RBP19.31■□□□□ 0.68
HLA-DQB1-208ENST00000484729 C17orf99Q6UX52 265 aa19.31■□□□□ 0.68
HLA-DQB1-208ENST00000484729 TRIM47Q96LD4 638 aa19.31■□□□□ 0.68
HLA-DQB1-208ENST00000484729 ZCCHC17Q9NP64 241 aaKnown RBP19.31■□□□□ 0.68
HLA-DQB1-208ENST00000484729 ZNF521Q96K83 1311 aa19.3■□□□□ 0.68
HLA-DQB1-208ENST00000484729 GNRH1P01148 92 aa19.3■□□□□ 0.68
HLA-DQB1-208ENST00000484729 PRMT2P55345 433 aa19.3■□□□□ 0.68
HLA-DQB1-208ENST00000484729 SUCLG2Q96I99 432 aa19.3■□□□□ 0.68
HLA-DQB1-208ENST00000484729 SRRDQ9UH36 339 aa19.3■□□□□ 0.68
HLA-DQB1-208ENST00000484729 OSBPP22059 807 aa19.29■□□□□ 0.68
HLA-DQB1-208ENST00000484729 PPIL2Q13356 520 aa19.29■□□□□ 0.68
HLA-DQB1-208ENST00000484729 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.29■□□□□ 0.68
HLA-DQB1-208ENST00000484729 FMNL1O95466 1100 aaPredicted RBP19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 CCL5P13501 91 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 INPP5BP32019 993 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 GRK4P32298 578 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 MIGA2Q7L4E1 593 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 RAET1EQ8TD07 263 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 TEKT1Q969V4 418 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 RIPOR2Q9Y4F9 1068 aa19.28■□□□□ 0.68
HLA-DQB1-208ENST00000484729 PDHXO00330 501 aa19.27■□□□□ 0.68
HLA-DQB1-208ENST00000484729 FBXO33Q7Z6M2 555 aa19.27■□□□□ 0.68
HLA-DQB1-208ENST00000484729 UBE2Q1Q7Z7E8 422 aa19.27■□□□□ 0.68
HLA-DQB1-208ENST00000484729 VPS37DQ86XT2 251 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms