RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 ADORA1P30542 326 aa17.11■□□□□ 0.33
ITGA4-210ENST00000484404 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
ITGA4-210ENST00000484404 ARMC9Q7Z3E5 817 aa17.11■□□□□ 0.33
ITGA4-210ENST00000484404 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
ITGA4-210ENST00000484404 LPIN2Q92539 896 aa17.11■□□□□ 0.33
ITGA4-210ENST00000484404 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
ITGA4-210ENST00000484404 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
ITGA4-210ENST00000484404 CEP126Q9P2H0 1117 aa17.11■□□□□ 0.33
ITGA4-210ENST00000484404 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
ITGA4-210ENST00000484404 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 GNAI3P08754 354 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 RASA3Q14644 834 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 SPDYE2Q495Y8 402 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 TMEM57Q8N5G2 664 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 CLMNQ96JQ2 1002 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 SERPINA10Q9UK55 444 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 DOCK2Q92608 1830 aa17.1■□□□□ 0.33
ITGA4-210ENST00000484404 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
ITGA4-210ENST00000484404 CIAO1O76071 339 aa17.09■□□□□ 0.33
ITGA4-210ENST00000484404 PHKA1P46020 1223 aa17.09■□□□□ 0.33
ITGA4-210ENST00000484404 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
ITGA4-210ENST00000484404 IL15P40933 162 aaPredicted RBP17.08■□□□□ 0.32
ITGA4-210ENST00000484404 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
ITGA4-210ENST00000484404 TEKT1Q969V4 418 aa17.08■□□□□ 0.32
ITGA4-210ENST00000484404 ABHD8Q96I13 439 aa17.08■□□□□ 0.32
ITGA4-210ENST00000484404 TMEM39BQ9GZU3 492 aa17.08■□□□□ 0.32
ITGA4-210ENST00000484404 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
ITGA4-210ENST00000484404 PPP2R3BQ9Y5P8 575 aa17.08■□□□□ 0.32
ITGA4-210ENST00000484404 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.32
ITGA4-210ENST00000484404 TFCP2Q12800 502 aa17.07■□□□□ 0.32
ITGA4-210ENST00000484404 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
ITGA4-210ENST00000484404 HDAC5Q9UQL6 1122 aa17.07■□□□□ 0.32
ITGA4-210ENST00000484404 ZBED9Q6R2W3 1325 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 GNAI2P04899 355 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 DGKZQ13574 1117 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 DIXDC1Q155Q3 683 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 LDLRAD1Q5T700 205 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 MCOLN1Q9GZU1 580 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
ITGA4-210ENST00000484404 PPP1R12BO60237 982 aaPredicted RBP17.05■□□□□ 0.32
ITGA4-210ENST00000484404 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
ITGA4-210ENST00000484404 PRDX5P30044 214 aa17.05■□□□□ 0.32
ITGA4-210ENST00000484404 TIMM10P62072 90 aa17.05■□□□□ 0.32
ITGA4-210ENST00000484404 TNFAIP1Q13829 316 aa17.05■□□□□ 0.32
ITGA4-210ENST00000484404 SUPT20HL1Q3ZLR7 823 aa17.05■□□□□ 0.32
ITGA4-210ENST00000484404 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
ITGA4-210ENST00000484404 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
ITGA4-210ENST00000484404 MAST3O60307 1309 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 USP2O75604 605 aaPredicted RBP17.04■□□□□ 0.32
ITGA4-210ENST00000484404 RLBP1P12271 317 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 SPRYD7Q5W111 196 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 WDR66Q8TBY9 1149 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 TEPSINQ96N21 525 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 ELP3Q9H9T3 547 aa17.04■□□□□ 0.32
ITGA4-210ENST00000484404 MAST2Q6P0Q8 1798 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 CCDC85CA6NKD9 419 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
ITGA4-210ENST00000484404 TNNI2P48788 182 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 MTX1Q13505 466 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 CCDC102BQ68D86 513 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 ZDHHC15Q96MV8 337 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
ITGA4-210ENST00000484404 TMOD2Q9NZR1 351 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 CDK5RAP2Q96SN8 1893 aa17.03■□□□□ 0.32
ITGA4-210ENST00000484404 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.32
ITGA4-210ENST00000484404 GJA5P36382 358 aa17.02■□□□□ 0.32
ITGA4-210ENST00000484404 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.32
ITGA4-210ENST00000484404 RASGRF1Q13972 1273 aa17.02■□□□□ 0.32
ITGA4-210ENST00000484404 MAP3K11Q16584 847 aa17.02■□□□□ 0.32
ITGA4-210ENST00000484404 APOBEC3HQ6NTF7 200 aaKnown RBP17.02■□□□□ 0.32
ITGA4-210ENST00000484404 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
ITGA4-210ENST00000484404 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
ITGA4-210ENST00000484404 DAGLAQ9Y4D2 1042 aa17.02■□□□□ 0.32
ITGA4-210ENST00000484404 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
ITGA4-210ENST00000484404 R3HDMLQ9H3Y0 253 aa17.01■□□□□ 0.31
ITGA4-210ENST00000484404 ABCF2Q9UG63 623 aa17.01■□□□□ 0.31
ITGA4-210ENST00000484404 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
ITGA4-210ENST00000484404 TCP10Q12799 353 aa17■□□□□ 0.31
ITGA4-210ENST00000484404 PI16Q6UXB8 463 aa17■□□□□ 0.31
ITGA4-210ENST00000484404 REM2Q8IYK8 340 aaPredicted RBP17■□□□□ 0.31
ITGA4-210ENST00000484404 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
ITGA4-210ENST00000484404 PANK1Q8TE04 598 aa17■□□□□ 0.31
ITGA4-210ENST00000484404 ZSWIM8A7E2V4 1837 aa17■□□□□ 0.31
ITGA4-210ENST00000484404 TM4SF4P48230 202 aa16.99■□□□□ 0.31
ITGA4-210ENST00000484404 G3BP1Q13283 466 aaKnown RBP eCLIP16.99■□□□□ 0.31
ITGA4-210ENST00000484404 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
ITGA4-210ENST00000484404 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
ITGA4-210ENST00000484404 HHIPL2Q6UWX4 724 aa16.99■□□□□ 0.31
ITGA4-210ENST00000484404 OPTNQ96CV9 577 aa16.99■□□□□ 0.31
ITGA4-210ENST00000484404 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
ITGA4-210ENST00000484404 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
ITGA4-210ENST00000484404 ATAD5Q96QE3 1844 aa16.98■□□□□ 0.31
ITGA4-210ENST00000484404 IGF2BP3O00425 579 aaKnown RBP eCLIP16.98■□□□□ 0.31
ITGA4-210ENST00000484404 NFIAQ12857 509 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms