RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 SALL1Q9NSC2 1324 aa32.75■■■□□ 2.83
SMDT1-203ENST00000484235 UQCRFS1P1P0C7P4 283 aa32.74■■■□□ 2.83
SMDT1-203ENST00000484235 RBM5P52756 815 aaKnown RBP eCLIP32.74■■■□□ 2.83
SMDT1-203ENST00000484235 CCDC158Q5M9N0 1113 aa32.74■■■□□ 2.83
SMDT1-203ENST00000484235 DBNDD2Q9BQY9 259 aa32.74■■■□□ 2.83
SMDT1-203ENST00000484235 COL1A1P02452 1464 aaPredicted RBP32.74■■■□□ 2.83
SMDT1-203ENST00000484235 SPDYE2BA6NHP3 402 aa32.73■■■□□ 2.83
SMDT1-203ENST00000484235 SPDYE6P0CI01 402 aa32.73■■■□□ 2.83
SMDT1-203ENST00000484235 ARID4AP29374 1257 aaPredicted RBP32.73■■■□□ 2.83
SMDT1-203ENST00000484235 PRMT6Q96LA8 375 aaPredicted RBP32.73■■■□□ 2.83
SMDT1-203ENST00000484235 PCDHB15Q9Y5E8 787 aa32.73■■■□□ 2.83
SMDT1-203ENST00000484235 WDR33Q9C0J8 1336 aaKnown RBP32.73■■■□□ 2.83
SMDT1-203ENST00000484235 APBB1O00213 710 aa32.72■■■□□ 2.83
SMDT1-203ENST00000484235 AAMPQ13685 434 aa32.72■■■□□ 2.83
SMDT1-203ENST00000484235 ZGPATQ8N5A5 531 aaKnown RBP32.72■■■□□ 2.83
SMDT1-203ENST00000484235 CCDC8Q9H0W5 538 aaPredicted RBP32.72■■■□□ 2.83
SMDT1-203ENST00000484235 MAST3O60307 1309 aa32.72■■■□□ 2.83
SMDT1-203ENST00000484235 MYO1BO43795 1136 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 CRKP46108 304 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 CST9Q5W186 159 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 AIDAQ96BJ3 306 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 IL1RAPL2Q9NP60 686 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 HMG20BQ9P0W2 317 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 DBNLQ9UJU6 430 aaKnown RBP32.71■■■□□ 2.83
SMDT1-203ENST00000484235 PCDHAC2Q9Y5I4 1007 aa32.71■■■□□ 2.83
SMDT1-203ENST00000484235 ADM5C9JUS6 153 aa32.7■■■□□ 2.83
SMDT1-203ENST00000484235 LDHBP07195 334 aaKnown RBP32.7■■■□□ 2.83
SMDT1-203ENST00000484235 TTC39AQ5SRH9 613 aa32.7■■■□□ 2.83
SMDT1-203ENST00000484235 AACSQ86V21 672 aa32.7■■■□□ 2.83
SMDT1-203ENST00000484235 CLASRPQ8N2M8 674 aaKnown RBP32.7■■■□□ 2.83
SMDT1-203ENST00000484235 SPATA5Q8NB90 893 aa32.7■■■□□ 2.83
SMDT1-203ENST00000484235 TEKT1Q969V4 418 aa32.7■■■□□ 2.83
SMDT1-203ENST00000484235 ZNF512BQ96KM6 892 aaPredicted RBP32.7■■■□□ 2.83
SMDT1-203ENST00000484235 DCTPP1Q9H773 170 aa32.69■■■□□ 2.82
SMDT1-203ENST00000484235 ABT1Q9ULW3 272 aaKnown RBP32.69■■■□□ 2.82
SMDT1-203ENST00000484235 LBX1P52954 281 aa32.68■■■□□ 2.82
SMDT1-203ENST00000484235 DLK2Q6UY11 383 aa32.68■■■□□ 2.82
SMDT1-203ENST00000484235 APOBEC3FQ8IUX4 373 aaKnown RBP32.68■■■□□ 2.82
SMDT1-203ENST00000484235 TLR7Q9NYK1 1049 aaKnown RBP32.68■■■□□ 2.82
SMDT1-203ENST00000484235 CELF2O95319 508 aaKnown RBP32.67■■■□□ 2.82
SMDT1-203ENST00000484235 PRDX5P30044 214 aa32.67■■■□□ 2.82
SMDT1-203ENST00000484235 MCAMP43121 646 aa32.67■■■□□ 2.82
SMDT1-203ENST00000484235 SPTY2D1Q68D10 685 aaPredicted RBP32.67■■■□□ 2.82
SMDT1-203ENST00000484235 HHIPL2Q6UWX4 724 aa32.67■■■□□ 2.82
SMDT1-203ENST00000484235 ZDHHC15Q96MV8 337 aa32.66■■■□□ 2.82
SMDT1-203ENST00000484235 ABCF2Q9UG63 623 aa32.66■■■□□ 2.82
SMDT1-203ENST00000484235 HSPA8P11142 646 aaKnown RBP32.65■■■□□ 2.82
SMDT1-203ENST00000484235 LRRCC1Q9C099 1032 aa32.65■■■□□ 2.82
SMDT1-203ENST00000484235 MAP2K1Q02750 393 aaPredicted RBP32.64■■■□□ 2.82
SMDT1-203ENST00000484235 PI16Q6UXB8 463 aa32.64■■■□□ 2.82
SMDT1-203ENST00000484235 ZNF408Q9H9D4 720 aa32.64■■■□□ 2.82
SMDT1-203ENST00000484235 SCAF8Q9UPN6 1271 aaKnown RBP32.64■■■□□ 2.82
SMDT1-203ENST00000484235 IFIT2P09913 472 aaKnown RBP32.63■■■□□ 2.81
SMDT1-203ENST00000484235 CDCA5Q96FF9 252 aa32.63■■■□□ 2.81
SMDT1-203ENST00000484235 CAPNS2Q96L46 248 aa32.63■■■□□ 2.81
SMDT1-203ENST00000484235 POLR2AP24928 1970 aaKnown RBP32.63■■■□□ 2.81
SMDT1-203ENST00000484235 MYH13Q9UKX3 1938 aa32.63■■■□□ 2.81
SMDT1-203ENST00000484235 AOX1Q06278 1338 aa32.62■■■□□ 2.81
SMDT1-203ENST00000484235 CLRN2A0PK11 232 aa32.62■■■□□ 2.81
SMDT1-203ENST00000484235 SPDYE2Q495Y8 402 aa32.62■■■□□ 2.81
SMDT1-203ENST00000484235 APOBEC3HQ6NTF7 200 aaKnown RBP32.62■■■□□ 2.81
SMDT1-203ENST00000484235 TDRD3Q9H7E2 651 aaKnown RBP32.62■■■□□ 2.81
SMDT1-203ENST00000484235 TLL2Q9Y6L7 1015 aa32.62■■■□□ 2.81
SMDT1-203ENST00000484235 ERICH6Q7L0X2 663 aa32.61■■■□□ 2.81
SMDT1-203ENST00000484235 SNRKQ9NRH2 765 aa32.61■■■□□ 2.81
SMDT1-203ENST00000484235 ZNF70Q9UC06 446 aaPredicted RBP32.61■■■□□ 2.81
SMDT1-203ENST00000484235 DIXDC1Q155Q3 683 aa32.6■■■□□ 2.81
SMDT1-203ENST00000484235 TBC1D9Q6ZT07 1266 aa32.6■■■□□ 2.81
SMDT1-203ENST00000484235 EXOC6Q8TAG9 804 aa32.6■■■□□ 2.81
SMDT1-203ENST00000484235 DEFB129Q9H1M3 183 aa32.6■■■□□ 2.81
SMDT1-203ENST00000484235 VEZTQ9HBM0 779 aa32.6■■■□□ 2.81
SMDT1-203ENST00000484235 CYP4F22Q6NT55 531 aa32.59■■■□□ 2.81
SMDT1-203ENST00000484235 DZIP1Q86YF9 867 aaKnown RBP32.59■■■□□ 2.81
SMDT1-203ENST00000484235 SLF2Q8IX21 1173 aa32.59■■■□□ 2.81
SMDT1-203ENST00000484235 BCL11AQ9H165 835 aa32.59■■■□□ 2.81
SMDT1-203ENST00000484235 THSD7BQ9C0I4 1608 aa32.59■■■□□ 2.81
SMDT1-203ENST00000484235 PPP2R3BQ9Y5P8 575 aa32.58■■■□□ 2.81
SMDT1-203ENST00000484235 TRPM7Q96QT4 1865 aa32.58■■■□□ 2.81
SMDT1-203ENST00000484235 ECE1P42892 770 aa32.57■■■□□ 2.8
SMDT1-203ENST00000484235 HDAC1Q13547 482 aaPredicted RBP32.57■■■□□ 2.8
SMDT1-203ENST00000484235 TNFAIP1Q13829 316 aa32.57■■■□□ 2.8
SMDT1-203ENST00000484235 PRAMEF18Q5VWM3 479 aa32.57■■■□□ 2.8
SMDT1-203ENST00000484235 C2orf69Q8N8R5 385 aa32.57■■■□□ 2.8
SMDT1-203ENST00000484235 LRP2BPQ9P2M1 347 aa32.57■■■□□ 2.8
SMDT1-203ENST00000484235 DAGLAQ9Y4D2 1042 aa32.57■■■□□ 2.8
SMDT1-203ENST00000484235 CYP2E1P05181 493 aaPredicted RBP32.56■■■□□ 2.8
SMDT1-203ENST00000484235 ZAP70P43403 619 aa32.56■■■□□ 2.8
SMDT1-203ENST00000484235 MECOMQ03112 1051 aa32.56■■■□□ 2.8
SMDT1-203ENST00000484235 SAPCD2Q86UD0 394 aa32.56■■■□□ 2.8
SMDT1-203ENST00000484235 FAM163AQ96GL9 167 aaPredicted RBP32.56■■■□□ 2.8
SMDT1-203ENST00000484235 GBA2Q9HCG7 927 aaPredicted RBP32.56■■■□□ 2.8
SMDT1-203ENST00000484235 SMARCA5O60264 1052 aaPredicted RBP32.55■■■□□ 2.8
SMDT1-203ENST00000484235 RAI14Q9P0K7 980 aa32.55■■■□□ 2.8
SMDT1-203ENST00000484235 IGSF3O75054 1194 aa32.54■■■□□ 2.8
SMDT1-203ENST00000484235 GSTO1P78417 241 aa32.54■■■□□ 2.8
SMDT1-203ENST00000484235 NF2P35240 595 aa32.53■■■□□ 2.8
SMDT1-203ENST00000484235 RASA3Q14644 834 aa32.53■■■□□ 2.8
SMDT1-203ENST00000484235 FKBP1CQ5VVH2 108 aa32.53■■■□□ 2.8
SMDT1-203ENST00000484235 NSUN4Q96CB9 384 aaKnown RBP32.53■■■□□ 2.8
SMDT1-203ENST00000484235 TMOD2Q9NZR1 351 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms