RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 TNNQ9UQP3 1299 aa23.98■■□□□ 1.43
NDUFA3-213ENST00000484103 SPDYE2Q495Y8 402 aa23.97■■□□□ 1.43
NDUFA3-213ENST00000484103 SPRYD7Q5W111 196 aa23.97■■□□□ 1.43
NDUFA3-213ENST00000484103 ATG9AQ7Z3C6 839 aa23.97■■□□□ 1.43
NDUFA3-213ENST00000484103 REM2Q8IYK8 340 aaPredicted RBP23.97■■□□□ 1.43
NDUFA3-213ENST00000484103 TMEM39BQ9GZU3 492 aa23.97■■□□□ 1.43
NDUFA3-213ENST00000484103 FGFR2P21802 821 aa23.96■■□□□ 1.43
NDUFA3-213ENST00000484103 SREBF2Q12772 1141 aa23.95■■□□□ 1.42
NDUFA3-213ENST00000484103 TNFAIP1Q13829 316 aa23.95■■□□□ 1.42
NDUFA3-213ENST00000484103 MIER1Q8N108 512 aa23.95■■□□□ 1.42
NDUFA3-213ENST00000484103 TBC1D22AQ8WUA7 517 aa23.95■■□□□ 1.42
NDUFA3-213ENST00000484103 TEKT1Q969V4 418 aa23.95■■□□□ 1.42
NDUFA3-213ENST00000484103 KIF16BQ96L93 1317 aa23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 BCAR3O75815 825 aa23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 IREB2P48200 963 aaKnown RBP23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 ATP2B3Q16720 1220 aa23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 LPIN2Q92539 896 aa23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 CLUAP1Q96AJ1 413 aa23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 CEP126Q9P2H0 1117 aa23.94■■□□□ 1.42
NDUFA3-213ENST00000484103 USP2O75604 605 aaPredicted RBP23.93■■□□□ 1.42
NDUFA3-213ENST00000484103 TM4SF4P48230 202 aa23.93■■□□□ 1.42
NDUFA3-213ENST00000484103 ZNF296Q8WUU4 475 aaPredicted RBP23.93■■□□□ 1.42
NDUFA3-213ENST00000484103 WNK4Q96J92 1243 aa23.93■■□□□ 1.42
NDUFA3-213ENST00000484103 R3HDMLQ9H3Y0 253 aa23.93■■□□□ 1.42
NDUFA3-213ENST00000484103 ELP3Q9H9T3 547 aa23.93■■□□□ 1.42
NDUFA3-213ENST00000484103 HNRNPUQ00839 825 aaKnown RBP eCLIP23.92■■□□□ 1.42
NDUFA3-213ENST00000484103 MYH13Q9UKX3 1938 aa23.91■■□□□ 1.42
NDUFA3-213ENST00000484103 TNNI2P48788 182 aa23.91■■□□□ 1.42
NDUFA3-213ENST00000484103 MAP3K11Q16584 847 aa23.91■■□□□ 1.42
NDUFA3-213ENST00000484103 ADORA1P30542 326 aa23.9■■□□□ 1.42
NDUFA3-213ENST00000484103 GJA5P36382 358 aa23.9■■□□□ 1.42
NDUFA3-213ENST00000484103 CTU1Q7Z7A3 348 aaKnown RBP23.9■■□□□ 1.42
NDUFA3-213ENST00000484103 TMOD2Q9NZR1 351 aa23.9■■□□□ 1.42
NDUFA3-213ENST00000484103 SRGAP3O43295 1099 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 CIAO1O76071 339 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 TRIM27P14373 513 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 ANKRD13AQ8IZ07 590 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 CNKSR2Q8WXI2 1034 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 TEPSINQ96N21 525 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 OTOFQ9HC10 1997 aa23.89■■□□□ 1.41
NDUFA3-213ENST00000484103 MANSC4A6NHS7 340 aaPredicted RBP23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 GPR25O00155 361 aa23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 IL15P40933 162 aaPredicted RBP23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 PHKA1P46020 1223 aa23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 SOX10P56693 466 aa23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 DIXDC1Q155Q3 683 aa23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 INTS3Q68E01 1043 aaKnown RBP23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 OPTNQ96CV9 577 aa23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 HDAC5Q9UQL6 1122 aa23.88■■□□□ 1.41
NDUFA3-213ENST00000484103 MAST3O60307 1309 aa23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 GNAI3P08754 354 aa23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 PRDX5P30044 214 aa23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 APOBEC3HQ6NTF7 200 aaKnown RBP23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 IFNL1Q8IU54 200 aa23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 WDR66Q8TBY9 1149 aa23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 ZDHHC15Q96MV8 337 aa23.87■■□□□ 1.41
NDUFA3-213ENST00000484103 IGF2BP3O00425 579 aaKnown RBP eCLIP23.86■■□□□ 1.41
NDUFA3-213ENST00000484103 IPO8O15397 1037 aaKnown RBP23.86■■□□□ 1.41
NDUFA3-213ENST00000484103 ZBTB48P10074 688 aaPredicted RBP23.86■■□□□ 1.41
NDUFA3-213ENST00000484103 HDLBPQ00341 1268 aaKnown RBP23.86■■□□□ 1.41
NDUFA3-213ENST00000484103 ARHGAP45Q92619 1136 aa23.86■■□□□ 1.41
NDUFA3-213ENST00000484103 GNL3LQ9NVN8 582 aaKnown RBP23.86■■□□□ 1.41
NDUFA3-213ENST00000484103 TIMM10P62072 90 aa23.85■■□□□ 1.41
NDUFA3-213ENST00000484103 VGLL4Q14135 290 aa23.85■■□□□ 1.41
NDUFA3-213ENST00000484103 ATF7IPQ6VMQ6 1270 aa23.85■■□□□ 1.41
NDUFA3-213ENST00000484103 LDHBP07195 334 aaKnown RBP23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 TCP10Q12799 353 aa23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 TFCP2Q12800 502 aa23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 OTUD5Q96G74 571 aa23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 COPRSQ9NQ92 184 aa23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 FBXO3Q9UK99 471 aa23.84■■□□□ 1.41
NDUFA3-213ENST00000484103 FKTNO75072 461 aa23.83■■□□□ 1.41
NDUFA3-213ENST00000484103 MLLT1Q03111 559 aaPredicted RBP23.83■■□□□ 1.41
NDUFA3-213ENST00000484103 CCDC102BQ68D86 513 aa23.83■■□□□ 1.41
NDUFA3-213ENST00000484103 SUGT1Q9Y2Z0 365 aa23.83■■□□□ 1.41
NDUFA3-213ENST00000484103 DAGLAQ9Y4D2 1042 aa23.83■■□□□ 1.41
NDUFA3-213ENST00000484103 CSADQ9Y600 493 aa23.83■■□□□ 1.41
NDUFA3-213ENST00000484103 MAP3K9P80192 1104 aa23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 MIGA2Q7L4E1 593 aa23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 TMEM57Q8N5G2 664 aa23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 NEUROD6Q96NK8 337 aa23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 WRNIP1Q96S55 665 aa23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 HPS5Q9UPZ3 1129 aa23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.82■■□□□ 1.4
NDUFA3-213ENST00000484103 ALDH1A1P00352 501 aa23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 GNAI2P04899 355 aa23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 INHBEP58166 350 aa23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 HHIPL2Q6UWX4 724 aa23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.81■■□□□ 1.41e-8■■□□□ 12
NDUFA3-213ENST00000484103 ZKSCAN4Q969J2 545 aaPredicted RBP23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 ABCF2Q9UG63 623 aa23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 DENND2AQ9ULE3 1009 aa23.81■■□□□ 1.4
NDUFA3-213ENST00000484103 A0A1B0GUL7 405 aa23.8■■□□□ 1.4
NDUFA3-213ENST00000484103 CDC42EP5Q6NZY7 148 aa23.8■■□□□ 1.4
NDUFA3-213ENST00000484103 PTPN18Q99952 460 aa23.8■■□□□ 1.4
NDUFA3-213ENST00000484103 PNMA6EA0A0J9YXQ4 647 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 NFIAQ12857 509 aa23.79■■□□□ 1.4
NDUFA3-213ENST00000484103 CRHR2Q13324 411 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms