RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ZNF711Q9Y462 761 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 NUTM2AQ8IVF1 878 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ORC3Q9UBD5 711 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 HMGB1P1B2RPK0 211 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 CA8P35219 290 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ANKRD20A3Q5VUR7 823 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 CAPRIN2Q6IMN6 1127 aaKnown RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 FERMT2Q96AC1 680 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 FERMT1Q9BQL6 677 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 TCP11L1Q9NUJ3 509 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 SEC63Q9UGP8 760 aaKnown RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 DDX41Q9UJV9 622 aaKnown RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 NPHP3Q7Z494 1330 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 APOEP02649 317 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ARL1P40616 181 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 INTS4Q96HW7 963 aaKnown RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 NUDCD3Q8IVD9 361 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ACTR5Q9H9F9 607 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 ARHGAP42A6NI28 874 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL12A1-207ENST00000483888 HHATQ5VTY9 493 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 RGS22Q8NE09 1264 aa11.47□□□□□ -0.57
COL12A1-207ENST00000483888 CCDC197Q8NCU1 140 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-207ENST00000483888 HVCN1Q96D96 273 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 RGS16O15492 202 aaPredicted RBP11.46□□□□□ -0.57
COL12A1-207ENST00000483888 CTNNA1P35221 906 aaKnown RBP11.46□□□□□ -0.57
COL12A1-207ENST00000483888 USP5P45974 858 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 I3L4J1 428 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 PSMA7O14818 248 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 SKIP12755 728 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 BCAP29Q9UHQ4 241 aa11.46□□□□□ -0.57
COL12A1-207ENST00000483888 STX17P56962 302 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 FANCCQ00597 558 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 HDAC1Q13547 482 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-207ENST00000483888 CLUL1Q15846 466 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 CHCHD3Q9NX63 227 aaKnown RBP11.46□□□□□ -0.58
COL12A1-207ENST00000483888 FGD6Q6ZV73 1430 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 ERBINQ96RT1 1412 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 SERPINB6P35237 376 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 LRMPQ12912 555 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 NEK1Q96PY6 1258 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 FRMD4BQ9Y2L6 1034 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 UBA7P41226 1012 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 TSHZ3Q63HK5 1081 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 NOP53Q9NZM5 478 aaKnown RBP11.46□□□□□ -0.58
COL12A1-207ENST00000483888 TACC3Q9Y6A5 838 aa11.46□□□□□ -0.58
COL12A1-207ENST00000483888 HMG20BQ9P0W2 317 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 SPTLC2O15270 562 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 EEF2P13639 858 aaKnown RBP11.45□□□□□ -0.58
COL12A1-207ENST00000483888 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
COL12A1-207ENST00000483888 RILPQ96NA2 401 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 MAN1A2O60476 641 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 PSMD7P51665 324 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 DTNBP1Q96EV8 351 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 RPGRIP1Q96KN7 1286 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 TXNDC16Q9P2K2 825 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 TRIM14Q14142 442 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 MRRFQ96E11 262 aaKnown RBP11.45□□□□□ -0.58
COL12A1-207ENST00000483888 TRIM31Q9BZY9 425 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 ANKRD65E5RJM6 399 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 MAP3K7O43318 606 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 PDHA1P08559 390 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 KRT10P13645 584 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 STX2P32856 288 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 ATP2B3Q16720 1220 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 MAP7D3Q8IWC1 876 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 TMEM63CQ9P1W3 806 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 C16orf87Q6PH81 154 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 CFAP221Q4G0U5 840 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 ST13P4Q8IZP2 240 aaPredicted RBP11.45□□□□□ -0.58
COL12A1-207ENST00000483888 RABGGTAQ92696 567 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 ANKRD30BQ9BXX2 1392 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 SEL1L2Q5TEA6 688 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 PSMB7Q99436 277 aa11.45□□□□□ -0.58
COL12A1-207ENST00000483888 LONRF3Q496Y0 759 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 EVI5LQ96CN4 794 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-207ENST00000483888 ESRRGP62508 458 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 FAM133BQ5BKY9 247 aaKnown RBP11.44□□□□□ -0.58
COL12A1-207ENST00000483888 KCTD16Q68DU8 428 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 CFAP61Q8NHU2 1237 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 EIF2AQ9BY44 585 aaKnown RBP11.44□□□□□ -0.58
COL12A1-207ENST00000483888 CTTNBP2NLQ9P2B4 639 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 SAR1BQ9Y6B6 198 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 ZNF213O14771 459 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 SEPT8Q92599 483 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 AIDAQ96BJ3 306 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 GADD45BO75293 160 aaPredicted RBP11.44□□□□□ -0.58
COL12A1-207ENST00000483888 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL12A1-207ENST00000483888 CLCN6P51797 869 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 ENO4A6NNW6 628 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 SUN1O94901 812 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 RWDD2BP57060 319 aa11.44□□□□□ -0.58
COL12A1-207ENST00000483888 LONRF2Q1L5Z9 754 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms