RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TNFAIP1Q13829 316 aa13.9□□□□□ -0.18
SMARCC1-205ENST00000483847 MTFR1Q15390 333 aa13.9□□□□□ -0.18
SMARCC1-205ENST00000483847 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
SMARCC1-205ENST00000483847 TTF2Q9UNY4 1162 aaKnown RBP13.9□□□□□ -0.18
SMARCC1-205ENST00000483847 FAM205AQ6ZU69 1335 aa13.9□□□□□ -0.19
SMARCC1-205ENST00000483847 PLIN1O60240 522 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 TLR2O60603 784 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 CTGFP29279 349 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 IFIT5Q13325 482 aaKnown RBP13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 MFSD14BQ5SR56 506 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 DZIP1LQ8IYY4 767 aaKnown RBP13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 SERPINA10Q9UK55 444 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 CSADQ9Y600 493 aa13.89□□□□□ -0.19
SMARCC1-205ENST00000483847 SPDYE5A6NIY4 337 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 BTBD19C9JJ37 291 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 FLIIQ13045 1269 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 GRIK5Q16478 980 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 TWISTNBQ3B726 338 aaPredicted RBP13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 EPHA10Q5JZY3 1008 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 LINS1Q8NG48 757 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 DNAAF4Q8WXU2 420 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 DPF3Q92784 378 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 SNCAIPQ9Y6H5 919 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 A0A0C4DFX4 3053 aa13.88□□□□□ -0.19
SMARCC1-205ENST00000483847 COL6A3P12111 3177 aa13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 CRKP46108 304 aa13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 GYG1P46976 350 aa13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 CACNB3P54284 484 aa13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 KIF22Q14807 665 aa13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 TDRD7Q8NHU6 1098 aaKnown RBP13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 ZKSCAN4Q969J2 545 aaPredicted RBP13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 PRO3102Q9H379 93 aa13.87□□□□□ -0.19
SMARCC1-205ENST00000483847 DLL1O00548 723 aa13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 IRF6O14896 467 aa13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 CETPP11597 493 aa13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 FKBP5Q13451 457 aaPredicted RBP13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 LMBR1LQ6UX01 489 aa13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 TRIM47Q96LD4 638 aa13.86□□□□□ -0.19
SMARCC1-205ENST00000483847 CUL9Q8IWT3 2517 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 TNNI2P48788 182 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 C17orf99Q6UX52 265 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 LDHAL6AQ6ZMR3 332 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 UBE2Q1Q7Z7E8 422 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 ERO1BQ86YB8 467 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 ZCCHC17Q9NP64 241 aaKnown RBP13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 CNNM1Q9NRU3 951 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 CPA4Q9UI42 421 aa13.85□□□□□ -0.19
SMARCC1-205ENST00000483847 WDHD1O75717 1129 aaPredicted RBP13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 GNRH1P01148 92 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 HIBADHP31937 336 aaKnown RBP13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 PSMC4P43686 418 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 PRMT2P55345 433 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 SNAPC2Q13487 334 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 SLC17A8Q8NDX2 589 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 WRNIP1Q96S55 665 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 SRRDQ9UH36 339 aa13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 IQSEC3Q9UPP2 1182 aaPredicted RBP13.84□□□□□ -0.19
SMARCC1-205ENST00000483847 LAMA3Q16787 3333 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 F6X3S4 739 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 CCL5P13501 91 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 OSBPP22059 807 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 GJA8P48165 433 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 PPIL2Q13356 520 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 CCDC57Q2TAC2 916 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 ADGRA2Q96PE1 1338 aa13.83□□□□□ -0.2
SMARCC1-205ENST00000483847 SOX1O00570 391 aaPredicted RBP13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 GJB1P08034 283 aa13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 GRK4P32298 578 aa13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 TAF7LQ5H9L4 462 aa13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 BEND3Q5T5X7 828 aa13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
SMARCC1-205ENST00000483847 PDHXO00330 501 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 ZBTB7BO15156 539 aaPredicted RBP13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 CHAF1AQ13111 956 aaPredicted RBP13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 RAET1EQ8TD07 263 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 HTATIP2Q9BUP3 242 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 RNF208Q9H0X6 261 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 MYPNQ86TC9 1320 aa13.81□□□□□ -0.2
SMARCC1-205ENST00000483847 INPP5BP32019 993 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 MOGSQ13724 837 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 MIGA2Q7L4E1 593 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 WWC1Q8IX03 1113 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 TEKT1Q969V4 418 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
SMARCC1-205ENST00000483847 GRM8O00222 908 aa13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 HDLBPQ00341 1268 aaKnown RBP13.79□□□□□ -0.2
SMARCC1-205ENST00000483847 PRKCZQ05513 592 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms