RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 TBC1D22AQ8WUA7 517 aa20.54■□□□□ 0.88
MRPL28-210ENST00000483764 BRCA1P38398 1863 aaKnown RBP20.54■□□□□ 0.88
MRPL28-210ENST00000483764 M0R2C6 588 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 ECE2O60344 883 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 PRDX5P30044 214 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 SYT17Q9BSW7 474 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 PUS7LQ9H0K6 701 aaKnown RBP20.53■□□□□ 0.88
MRPL28-210ENST00000483764 ZNF277Q9NRM2 450 aaPredicted RBP20.53■□□□□ 0.88
MRPL28-210ENST00000483764 CCDC171Q6TFL3 1326 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 LDHBP07195 334 aaKnown RBP20.53■□□□□ 0.88
MRPL28-210ENST00000483764 PTH1RQ03431 593 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 TTLL5Q6EMB2 1281 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 TMED8Q6PL24 325 aaPredicted RBP20.53■□□□□ 0.88
MRPL28-210ENST00000483764 NSUN4Q96CB9 384 aaKnown RBP20.53■□□□□ 0.88
MRPL28-210ENST00000483764 TAOK3Q9H2K8 898 aa20.53■□□□□ 0.88
MRPL28-210ENST00000483764 DOCK2Q92608 1830 aa20.52■□□□□ 0.88
MRPL28-210ENST00000483764 CYP7A1P22680 504 aa20.52■□□□□ 0.87
MRPL28-210ENST00000483764 MCCP23508 829 aa20.52■□□□□ 0.87
MRPL28-210ENST00000483764 MECOMQ03112 1051 aa20.52■□□□□ 0.87
MRPL28-210ENST00000483764 MFSD14BQ5SR56 506 aa20.52■□□□□ 0.87
MRPL28-210ENST00000483764 NAA16Q6N069 864 aaPredicted RBP20.52■□□□□ 0.87
MRPL28-210ENST00000483764 LARGE2Q8N3Y3 721 aa20.52■□□□□ 0.87
MRPL28-210ENST00000483764 FBXW7Q969H0 707 aa20.52■□□□□ 0.87
MRPL28-210ENST00000483764 ST18O60284 1047 aa20.51■□□□□ 0.87
MRPL28-210ENST00000483764 ZNF384Q8TF68 577 aa20.51■□□□□ 0.87
MRPL28-210ENST00000483764 SRCAPQ6ZRS2 3230 aa20.51■□□□□ 0.87
MRPL28-210ENST00000483764 MYH13Q9UKX3 1938 aa20.51■□□□□ 0.87
MRPL28-210ENST00000483764 NFKBIEO00221 500 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 MCM4P33991 863 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 MCM2P49736 904 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 ANAPC15P60006 121 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 DZIP1Q86YF9 867 aaKnown RBP20.5■□□□□ 0.87
MRPL28-210ENST00000483764 MAP4K1Q92918 833 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 GBP4Q96PP9 640 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 KCNQ5Q9NR82 932 aa20.5■□□□□ 0.87
MRPL28-210ENST00000483764 MYO5AQ9Y4I1 1855 aaKnown RBP20.5■□□□□ 0.87
MRPL28-210ENST00000483764 GPAA1O43292 621 aa20.49■□□□□ 0.87
MRPL28-210ENST00000483764 HSP90AA1P07900 732 aaKnown RBP20.49■□□□□ 0.87
MRPL28-210ENST00000483764 IARSP41252 1262 aaKnown RBP20.49■□□□□ 0.87
MRPL28-210ENST00000483764 GRIK5Q16478 980 aa20.49■□□□□ 0.87
MRPL28-210ENST00000483764 STRIP1Q5VSL9 837 aa20.49■□□□□ 0.87
MRPL28-210ENST00000483764 AIDAQ96BJ3 306 aa20.49■□□□□ 0.87
MRPL28-210ENST00000483764 SUGT1Q9Y2Z0 365 aa20.49■□□□□ 0.87
MRPL28-210ENST00000483764 USP17L3A6NCW0 530 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 USP17L4A6NCW7 530 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 USP17L1Q7RTZ2 530 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 ADGRA1Q86SQ6 560 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 IL17RAQ96F46 866 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 LTBP3Q9NS15 1303 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 MYH7P12883 1935 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 HSPA4P34932 840 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 GSTO1P78417 241 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 STRBPQ96SI9 672 aaKnown RBP20.48■□□□□ 0.87
MRPL28-210ENST00000483764 DSCC1Q9BVC3 393 aa20.48■□□□□ 0.87
MRPL28-210ENST00000483764 CWC22Q9HCG8 908 aaKnown RBP20.48■□□□□ 0.87
MRPL28-210ENST00000483764 YDJCA8MPS7 323 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 MBD4O95243 580 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 HSPD1P10809 573 aaKnown RBP20.47■□□□□ 0.87
MRPL28-210ENST00000483764 GOLGB1Q14789 3259 aaKnown RBP20.47■□□□□ 0.87
MRPL28-210ENST00000483764 DACT2Q5SW24 774 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 NIM1KQ8IY84 436 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 CERS5Q8N5B7 392 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 MIGA1Q8NAN2 632 aa20.47■□□□□ 0.87
MRPL28-210ENST00000483764 RBM8AQ9Y5S9 174 aaKnown RBP20.47■□□□□ 0.87
MRPL28-210ENST00000483764 MAGEB6P1A0A0J9YX57 407 aa20.46■□□□□ 0.87
MRPL28-210ENST00000483764 LDHCP07864 332 aa20.46■□□□□ 0.87
MRPL28-210ENST00000483764 FKBP1AP62942 108 aaKnown RBP20.46■□□□□ 0.87
MRPL28-210ENST00000483764 MXD3Q9BW11 206 aa20.46■□□□□ 0.87
MRPL28-210ENST00000483764 ARMT1Q9H993 441 aa20.46■□□□□ 0.87
MRPL28-210ENST00000483764 ISY1Q9ULR0 285 aaKnown RBP20.46■□□□□ 0.87
MRPL28-210ENST00000483764 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
MRPL28-210ENST00000483764 U3KPZ7 1027 aaPredicted RBP20.46■□□□□ 0.87
MRPL28-210ENST00000483764 CHD4Q14839 1912 aa20.46■□□□□ 0.87
MRPL28-210ENST00000483764 NECTIN1Q15223 517 aa20.45■□□□□ 0.86
MRPL28-210ENST00000483764 SKOR2Q2VWA4 1001 aaPredicted RBP20.45■□□□□ 0.86
MRPL28-210ENST00000483764 FER1L6Q2WGJ9 1857 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 DIXDC1Q155Q3 683 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
MRPL28-210ENST00000483764 CLEC17AQ6ZS10 378 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 SLF2Q8IX21 1173 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 LCORLQ8N3X6 602 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
MRPL28-210ENST00000483764 RIOK1Q9BRS2 568 aaKnown RBP20.44■□□□□ 0.86
MRPL28-210ENST00000483764 GNAT2P19087 354 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 NUCB2P80303 420 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 RASSF7Q02833 373 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 ARHGAP27Q6ZUM4 889 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 PALD1Q9ULE6 856 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 COL4A5P29400 1685 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 PATL2C9JE40 543 aaKnown RBP20.43■□□□□ 0.86
MRPL28-210ENST00000483764 F8W031 263 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-210ENST00000483764 FOXP2O15409 715 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 DYNLL1P63167 89 aaKnown RBP20.43■□□□□ 0.86
MRPL28-210ENST00000483764 CREB3L3Q68CJ9 461 aa20.43■□□□□ 0.86
MRPL28-210ENST00000483764 FAM163AQ96GL9 167 aaPredicted RBP20.43■□□□□ 0.86
MRPL28-210ENST00000483764 TTF2Q9UNY4 1162 aaKnown RBP20.43■□□□□ 0.86
MRPL28-210ENST00000483764 MROH7-TTC4A0A0A0MT08 1334 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms