RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 MAP3K12Q12852 859 aa10.49□□□□□ -0.73
CDC42SE1-204ENST00000483763 ANKRD1Q15327 319 aa10.49□□□□□ -0.73
CDC42SE1-204ENST00000483763 ZNF384Q8TF68 577 aa10.49□□□□□ -0.73
CDC42SE1-204ENST00000483763 ABCF2Q9UG63 623 aa10.49□□□□□ -0.73
CDC42SE1-204ENST00000483763 MYH7P12883 1935 aa10.49□□□□□ -0.73
CDC42SE1-204ENST00000483763 PRKAB2O43741 272 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 STX6O43752 255 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 PRPF40AO75400 957 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 SERPINB2P05120 415 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 IMMTQ16891 758 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 AGXT2Q9BYV1 514 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 ARMT1Q9H993 441 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 SPON1Q9HCB6 807 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 EPB41L4AQ9HCS5 686 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 INCENPQ9NQS7 918 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 LRP2BPQ9P2M1 347 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 A0A1B0GUL6 1792 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 JAK2O60674 1132 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 MBD4O95243 580 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 APPP05067 770 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 APOBRQ0VD83 1088 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 SCRN1Q12765 414 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 TBC1D10CQ8IV04 446 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 LCORLQ8N3X6 602 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 MIGA1Q8NAN2 632 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 AIDAQ96BJ3 306 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 CTNNA3Q9UI47 895 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 IRS2Q9Y4H2 1338 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 LAMA4Q16363 1823 aa10.48□□□□□ -0.73
CDC42SE1-204ENST00000483763 ZNF213O14771 459 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 HMGB1P09429 215 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 ANTXR2P58335 489 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 CRY2Q49AN0 593 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 CAVIN4Q5BKX8 364 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 VPS37DQ86XT2 251 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 GTF3C6Q969F1 213 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 GDPD2Q9HCC8 539 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 JAG2Q9Y219 1238 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 TACC3Q9Y6A5 838 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 GSG1L2A8MUP6 293 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 POLRMTO00411 1230 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 PPFIA3O75145 1194 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 GRAPQ13588 217 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 MB21D2Q8IYB1 491 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 GRAPLQ8TC17 118 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 GPR101Q96P66 508 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 NSFL1CQ9UNZ2 370 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 MTMR6Q9Y217 621 aa10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 WDR33Q9C0J8 1336 aaKnown RBP10.47□□□□□ -0.73
CDC42SE1-204ENST00000483763 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 SMIM22K7EJ46 135 aa10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 ZSCAN22P10073 491 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 FGD1P98174 961 aa10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 IFNL3Q8IZI9 196 aa10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 GPT2Q8TD30 523 aa10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 DOCK2Q92608 1830 aa10.46□□□□□ -0.73
CDC42SE1-204ENST00000483763 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 CTDNEP1O95476 244 aa10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 HIBADHP31937 336 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 FHDC1Q9C0D6 1143 aaPredicted RBP10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 ANKRD2Q9GZV1 360 aa10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 NCOA5Q9HCD5 579 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.74
CDC42SE1-204ENST00000483763 CYP7A1P22680 504 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 CCT2P78371 535 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 RAI14Q9P0K7 980 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 ANKIB1Q9P2G1 1089 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 DDX49Q9Y6V7 483 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 PFKFB2O60825 505 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 F13A1P00488 732 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 PRDX5P30044 214 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 KLHL40Q2TBA0 621 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 LARP1BQ659C4 914 aaKnown RBP10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 CYB5R4Q7L1T6 521 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 SDR42E1Q8WUS8 393 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 DDX11Q96FC9 970 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 BRPF3Q9ULD4 1205 aa10.45□□□□□ -0.74
CDC42SE1-204ENST00000483763 PRC1O43663 620 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 ST5P78524 1137 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 FLAD1Q8NFF5 587 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 NCOA7Q8NI08 942 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 RPGRQ92834 1020 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 RIOK1Q9BRS2 568 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 SENP2Q9HC62 589 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 SLC4A4Q9Y6R1 1079 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 NEDD4P46934 1319 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 VPS37CA5D8V6 355 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 B4E1Z4 1266 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 MCM5P33992 734 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 EVCP57679 992 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 DYNLL1P63167 89 aaKnown RBP10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 GPSM2P81274 684 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 CHAF1AQ13111 956 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 ALX1Q15699 326 aa10.44□□□□□ -0.74
CDC42SE1-204ENST00000483763 FAM173BQ6P4H8 233 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms