RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 HHIPL2Q6UWX4 724 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 KRT26Q7Z3Y9 468 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 APOBEC3FQ8IUX4 373 aaKnown RBP19.12■□□□□ 0.65
RPP40-206ENST00000483546 TEKT1Q969V4 418 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 CCDC8Q9H0W5 538 aaPredicted RBP19.12■□□□□ 0.65
RPP40-206ENST00000483546 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 HMG20BQ9P0W2 317 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 IFIT2P09913 472 aaKnown RBP19.11■□□□□ 0.65
RPP40-206ENST00000483546 CRKP46108 304 aa19.11■□□□□ 0.65
RPP40-206ENST00000483546 RBM5P52756 815 aaKnown RBP eCLIP19.11■□□□□ 0.65
RPP40-206ENST00000483546 ANGEL2Q5VTE6 544 aaKnown RBP19.11■□□□□ 0.65
RPP40-206ENST00000483546 APBB1O00213 710 aa19.1■□□□□ 0.65
RPP40-206ENST00000483546 MCAMP43121 646 aa19.1■□□□□ 0.65
RPP40-206ENST00000483546 SLF2Q8IX21 1173 aa19.1■□□□□ 0.65
RPP40-206ENST00000483546 ZDHHC15Q96MV8 337 aa19.1■□□□□ 0.65
RPP40-206ENST00000483546 GLIS2Q9BZE0 524 aaPredicted RBP19.1■□□□□ 0.65
RPP40-206ENST00000483546 MYH2Q9UKX2 1941 aa19.1■□□□□ 0.65
RPP40-206ENST00000483546 PRDX5P30044 214 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 GRIK5Q16478 980 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 EXOC6Q8TAG9 804 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.09■□□□□ 0.65
RPP40-206ENST00000483546 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 CREBZFQ9NS37 354 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 TLR7Q9NYK1 1049 aaKnown RBP19.09■□□□□ 0.65
RPP40-206ENST00000483546 MAST2Q6P0Q8 1798 aa19.09■□□□□ 0.65
RPP40-206ENST00000483546 TMEM88BA6NKF7 163 aa19.08■□□□□ 0.64
RPP40-206ENST00000483546 USP48Q86UV5 1035 aa19.08■□□□□ 0.64
RPP40-206ENST00000483546 PRMT6Q96LA8 375 aaPredicted RBP19.08■□□□□ 0.64
RPP40-206ENST00000483546 ABCF2Q9UG63 623 aa19.08■□□□□ 0.64
RPP40-206ENST00000483546 PPP2R3BQ9Y5P8 575 aa19.08■□□□□ 0.64
RPP40-206ENST00000483546 ASTN2O75129 1339 aaPredicted RBP19.07■□□□□ 0.64
RPP40-206ENST00000483546 TNFAIP1Q13829 316 aa19.07■□□□□ 0.64
RPP40-206ENST00000483546 SPDYE2Q495Y8 402 aa19.07■□□□□ 0.64
RPP40-206ENST00000483546 TMED8Q6PL24 325 aaPredicted RBP19.07■□□□□ 0.64
RPP40-206ENST00000483546 DZIP1Q86YF9 867 aaKnown RBP19.07■□□□□ 0.64
RPP40-206ENST00000483546 RWDD1Q9H446 243 aaPredicted RBP19.07■□□□□ 0.64
RPP40-206ENST00000483546 TRAF5O00463 557 aa19.06■□□□□ 0.64
RPP40-206ENST00000483546 GSTO1P78417 241 aa19.06■□□□□ 0.64
RPP40-206ENST00000483546 FAM163AQ96GL9 167 aaPredicted RBP19.06■□□□□ 0.64
RPP40-206ENST00000483546 DOCK2Q92608 1830 aa19.05■□□□□ 0.64
RPP40-206ENST00000483546 ADM5C9JUS6 153 aa19.05■□□□□ 0.64
RPP40-206ENST00000483546 PI16Q6UXB8 463 aa19.05■□□□□ 0.64
RPP40-206ENST00000483546 TMOD2Q9NZR1 351 aa19.05■□□□□ 0.64
RPP40-206ENST00000483546 LRP2BPQ9P2M1 347 aa19.05■□□□□ 0.64
RPP40-206ENST00000483546 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
RPP40-206ENST00000483546 GAKO14976 1311 aa19.04■□□□□ 0.64
RPP40-206ENST00000483546 CELF2O95319 508 aaKnown RBP19.04■□□□□ 0.64
RPP40-206ENST00000483546 LDHCP07864 332 aa19.04■□□□□ 0.64
RPP40-206ENST00000483546 TTF1Q15361 905 aaPredicted RBP19.04■□□□□ 0.64
RPP40-206ENST00000483546 FKBP1CQ5VVH2 108 aa19.04■□□□□ 0.64
RPP40-206ENST00000483546 APOBEC3HQ6NTF7 200 aaKnown RBP19.04■□□□□ 0.64
RPP40-206ENST00000483546 GPATCH3Q96I76 525 aa19.04■□□□□ 0.64
RPP40-206ENST00000483546 ZNF70Q9UC06 446 aaPredicted RBP19.04■□□□□ 0.64
RPP40-206ENST00000483546 DAGLAQ9Y4D2 1042 aa19.04■□□□□ 0.64
RPP40-206ENST00000483546 PCDHAC2Q9Y5I4 1007 aa19.04■□□□□ 0.64
RPP40-206ENST00000483546 MYO5AQ9Y4I1 1855 aaKnown RBP19.03■□□□□ 0.64
RPP40-206ENST00000483546 MAP4K4O95819 1239 aaPredicted RBP19.03■□□□□ 0.64
RPP40-206ENST00000483546 CYP2E1P05181 493 aaPredicted RBP19.03■□□□□ 0.64
RPP40-206ENST00000483546 ATP5JP18859 108 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 NF2P35240 595 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 ZAP70P43403 619 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 TNNI2P48788 182 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 DIXDC1Q155Q3 683 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 CDCA5Q96FF9 252 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 TDRD3Q9H7E2 651 aaKnown RBP19.03■□□□□ 0.64
RPP40-206ENST00000483546 SNRKQ9NRH2 765 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 RAI14Q9P0K7 980 aa19.03■□□□□ 0.64
RPP40-206ENST00000483546 CLRN2A0PK11 232 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 FKBP1BP68106 108 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 MECOMQ03112 1051 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 CST9Q5W186 159 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 NSUN4Q96CB9 384 aaKnown RBP19.02■□□□□ 0.64
RPP40-206ENST00000483546 DEFB129Q9H1M3 183 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 VEZTQ9HBM0 779 aa19.02■□□□□ 0.64
RPP40-206ENST00000483546 MROH7-TTC4A0A0A0MT08 1334 aa19.01■□□□□ 0.63
RPP40-206ENST00000483546 PAPPA2Q9BXP8 1791 aa19.01■□□□□ 0.63
RPP40-206ENST00000483546 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
RPP40-206ENST00000483546 FAM83AQ86UY5 434 aa19.01■□□□□ 0.63
RPP40-206ENST00000483546 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
RPP40-206ENST00000483546 ECHDC1Q9NTX5 307 aa19.01■□□□□ 0.63
RPP40-206ENST00000483546 FMR1Q06787 632 aaKnown RBP eCLIP19■□□□□ 0.63
RPP40-206ENST00000483546 MAP3K12Q12852 859 aa19■□□□□ 0.63
RPP40-206ENST00000483546 C2orf69Q8N8R5 385 aa19■□□□□ 0.63
RPP40-206ENST00000483546 HHIPL1Q96JK4 782 aa19■□□□□ 0.63
RPP40-206ENST00000483546 ZNF408Q9H9D4 720 aa19■□□□□ 0.63
RPP40-206ENST00000483546 GBA2Q9HCG7 927 aaPredicted RBP19■□□□□ 0.63
RPP40-206ENST00000483546 TLL2Q9Y6L7 1015 aa19■□□□□ 0.63
RPP40-206ENST00000483546 AOX1Q06278 1338 aa19■□□□□ 0.63
RPP40-206ENST00000483546 TTC41PQ6P2S7 1318 aa19■□□□□ 0.63
RPP40-206ENST00000483546 RPAP1Q9BWH6 1393 aaPredicted RBP18.99■□□□□ 0.63
RPP40-206ENST00000483546 GPR75-ASB3A0A0A6YYF3 556 aa18.99■□□□□ 0.63
RPP40-206ENST00000483546 RASSF10A6NK89 507 aa18.99■□□□□ 0.63
RPP40-206ENST00000483546 SUPT20HL1Q3ZLR7 823 aa18.99■□□□□ 0.63
RPP40-206ENST00000483546 NAA16Q6N069 864 aaPredicted RBP18.99■□□□□ 0.63
RPP40-206ENST00000483546 CERS3Q8IU89 383 aa18.99■□□□□ 0.63
RPP40-206ENST00000483546 HAUS7Q99871 368 aa18.99■□□□□ 0.63
RPP40-206ENST00000483546 ABT1Q9ULW3 272 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms