RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 KDRP35968 1356 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 IKBKBO14920 756 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 ZNF202O95125 648 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 CYP21A2P08686 494 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 MMP14P50281 582 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 STOX1Q6ZVD7 989 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 GPATCH11Q8N954 259 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 LINC00301Q8NCQ3 95 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 RTEL1Q9NZ71 1219 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 PSEN1P49768 467 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 STK38Q15208 465 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 SF3A1Q15459 793 aaKnown RBP13.6□□□□□ -0.23
VTI1A-205ENST00000483122 E2F4Q16254 413 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 OTUD7BQ6GQQ9 843 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 HDXQ7Z353 690 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
VTI1A-205ENST00000483122 IRX2Q9BZI1 471 aaPredicted RBP13.6□□□□□ -0.23
VTI1A-205ENST00000483122 ABCB6Q9NP58 842 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 PUF60Q9UHX1 559 aaKnown RBP13.6□□□□□ -0.23
VTI1A-205ENST00000483122 KIF1AQ12756 1690 aa13.6□□□□□ -0.23
VTI1A-205ENST00000483122 C1orf167Q5SNV9 1468 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 CBFA2T2O43439 604 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 CHMP4BP1P59074 171 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 PPM1EQ8WY54 764 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 BAG1Q99933 345 aaPredicted RBP13.59□□□□□ -0.23
VTI1A-205ENST00000483122 DESI2Q9BSY9 194 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 PHACTR2O75167 634 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 PDILTQ8N807 584 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
VTI1A-205ENST00000483122 L1RE1Q9UN81 338 aa13.59□□□□□ -0.23
VTI1A-205ENST00000483122 CUTAO60888 179 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
VTI1A-205ENST00000483122 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 LAMA4Q16363 1823 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 SALL1Q9NSC2 1324 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 GOLGA6L9A6NEM1 432 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 POLR3DP05423 398 aaPredicted RBP13.58□□□□□ -0.24
VTI1A-205ENST00000483122 ADKP55263 362 aaKnown RBP13.58□□□□□ -0.24
VTI1A-205ENST00000483122 HSP90AA4PQ58FG1 418 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 CNNM3Q8NE01 707 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 DEF6Q9H4E7 631 aa13.58□□□□□ -0.24
VTI1A-205ENST00000483122 MRPL44Q9H9J2 332 aaKnown RBP13.58□□□□□ -0.24
VTI1A-205ENST00000483122 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
VTI1A-205ENST00000483122 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
VTI1A-205ENST00000483122 ACEP12821 1306 aa13.57□□□□□ -0.24
VTI1A-205ENST00000483122 USP5P45974 858 aa13.57□□□□□ -0.24
VTI1A-205ENST00000483122 MYL5Q02045 173 aa13.57□□□□□ -0.24
VTI1A-205ENST00000483122 RAB21Q9UL25 225 aa13.57□□□□□ -0.24
VTI1A-205ENST00000483122 SPTLC2O15270 562 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
VTI1A-205ENST00000483122 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 PFKFB1P16118 471 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
VTI1A-205ENST00000483122 G3BP1Q13283 466 aaKnown RBP eCLIP13.56□□□□□ -0.24
VTI1A-205ENST00000483122 MTF1Q14872 753 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 CCDC102AQ96A19 550 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 FANCLQ9NW38 375 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 SLAIN2Q9P270 581 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 MROH7-TTC4A0A0A0MT08 1334 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 USP31Q70CQ4 1352 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 A0A0U1RQJ8 604 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 TOM1O60784 492 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 TFRCP02786 760 aaKnown RBP13.56□□□□□ -0.24
VTI1A-205ENST00000483122 FDPSP14324 419 aaKnown RBP13.56□□□□□ -0.24
VTI1A-205ENST00000483122 TC2NQ8N9U0 490 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 MSANTD4Q8NCY6 345 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 ATRIPQ8WXE1 791 aa13.56□□□□□ -0.24
VTI1A-205ENST00000483122 WDHD1O75717 1129 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-205ENST00000483122 CPP00450 1065 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 CWF19L2Q2TBE0 894 aaKnown RBP13.55□□□□□ -0.24
VTI1A-205ENST00000483122 SUGP1Q8IWZ8 645 aaKnown RBP13.55□□□□□ -0.24
VTI1A-205ENST00000483122 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-205ENST00000483122 ZNF609O15014 1411 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 STX10O60499 249 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 RHOXF2BP0C7M4 288 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 CASP8Q14790 479 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
VTI1A-205ENST00000483122 DHX32Q7L7V1 743 aaKnown RBP13.55□□□□□ -0.24
VTI1A-205ENST00000483122 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 SUCLG2Q96I99 432 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 RHOXF2Q9BQY4 288 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 HDAC5Q9UQL6 1122 aa13.55□□□□□ -0.24
VTI1A-205ENST00000483122 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 PLEKHG3A1L390 1219 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 KCNQ3O43525 872 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 VSNL1P62760 191 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 PNOCQ13519 176 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 ESCO1Q5FWF5 840 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 MSL3Q8N5Y2 521 aaKnown RBP13.54□□□□□ -0.24
VTI1A-205ENST00000483122 FAM71BQ8TC56 605 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 FAM204AQ9H8W3 233 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
VTI1A-205ENST00000483122 FLT4P35916 1363 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms