RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 BCO2Q9BYV7 579 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 SPEF1Q9Y4P9 236 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 PTCH2Q9Y6C5 1203 aa6.43□□□□□ -1.38
R3HDM1-216ENST00000483065 SHTN1A0MZ66 631 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 TCERG1O14776 1098 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 RFPL3O75679 317 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 GNRH1P01148 92 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 SMTNP53814 917 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 MTFR1Q15390 333 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 SNAP47Q5SQN1 464 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 NXNQ6DKJ4 435 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 XKR5Q6UX68 686 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 SV2BQ7L1I2 683 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 THNSL2Q86YJ6 484 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 ETFBKMTQ8IXQ9 262 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 DRC7Q8IY82 874 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 EPS8L3Q8TE67 593 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 PMEPA1Q969W9 287 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 SLC39A13Q96H72 371 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 NGLY1Q96IV0 654 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 FERD3LQ96RJ6 166 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 INO80BQ9C086 356 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 ST7Q9NRC1 585 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 ATG3Q9NT62 314 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 CD2APQ9Y5K6 639 aa6.42□□□□□ -1.38
R3HDM1-216ENST00000483065 CDK2AP1O14519 115 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 PPEF1O14829 653 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 PHACTR2O75167 634 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 MCL1Q07820 350 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 DHX9Q08211 1270 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 MYBPC2Q14324 1141 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 ALFQ53S48 1182 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 USPL1Q5W0Q7 1092 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 PDE12Q6L8Q7 609 aaKnown RBP6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 NXPE4Q6UWF7 544 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 TREML1Q86YW5 311 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 TCEAL8Q8IYN2 117 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 ENAHQ8N8S7 591 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 MYRIPQ8NFW9 859 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 TTC8Q8TAM2 541 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 RIN3Q8TB24 985 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 E2F7Q96AV8 911 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 KCTD15Q96SI1 283 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 ZFYVE28Q9HCC9 887 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 STRN4Q9NRL3 753 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 ZIM2Q9NZV7 527 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 INTUQ9ULD6 942 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 PCDHB3Q9Y5E6 796 aa6.41□□□□□ -1.38
R3HDM1-216ENST00000483065 CFAP69A5D8W1 941 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 IQCA1LA6NCM1 817 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 TIMM44O43615 452 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 PDE8AO60658 829 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 TNFRSF21O75509 655 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 GIPRP48546 466 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 PPM1FP49593 454 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 ZNF165P49910 485 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 ITKQ08881 620 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 PIN1Q13526 163 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 AKAP4Q5JQC9 854 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 C10orf62Q5T681 223 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 ACBD5Q5T8D3 534 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 LARP1BQ659C4 914 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 POTEAQ6S8J7 498 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 DGKHQ86XP1 1220 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 RAVER1Q8IY67 606 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 ALDH16A1Q8IZ83 802 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 CELF2-AS1Q8N7Q2 184 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 CXorf38Q8TB03 319 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 SNRNP27Q8WVK2 155 aaKnown RBP6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 TRERF1Q96PN7 1200 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 PRDM11Q9NQV5 511 aa6.4□□□□□ -1.38
R3HDM1-216ENST00000483065 GREM1O60565 184 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 ZRANB2O95218 330 aaKnown RBP eCLIP6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 VARSP26640 1264 aaKnown RBP6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 RAB27AP51159 221 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 RAB15P59190 212 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 TEAD4Q15561 434 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 INO80DQ53TQ3 878 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 ZNF438Q7Z4V0 828 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 C14orf80Q86SX3 495 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 ZBTB46Q86UZ6 589 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 CYP4X1Q8N118 509 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 CPXCR1Q8N123 301 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 AHI1Q8N157 1196 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 CCDC24Q8N4L8 307 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 SPSB2Q99619 263 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 RUSC1Q9BVN2 902 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 C1QTNF2Q9BXJ5 285 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 GGNBP2Q9H3C7 697 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 ETNK1Q9HBU6 452 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 GTF2A1LQ9UNN4 478 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 ZNF232Q9UNY5 417 aa6.39□□□□□ -1.39
R3HDM1-216ENST00000483065 AKAP10O43572 662 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 DDAH1O94760 285 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 LMNB1P20700 586 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 LMNB2Q03252 620 aa6.38□□□□□ -1.39
R3HDM1-216ENST00000483065 MLC1Q15049 377 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms