RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-205ENST00000482968 USP17L1Q7RTZ2 530 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 ZNF589Q86UQ0 364 aaPredicted RBP18.09■□□□□ 0.49
PHGDH-205ENST00000482968 NIM1KQ8IY84 436 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 NSUN4Q96CB9 384 aaKnown RBP18.09■□□□□ 0.49
PHGDH-205ENST00000482968 UPF2Q9HAU5 1272 aaKnown RBP18.09■□□□□ 0.49
PHGDH-205ENST00000482968 ANO2Q9NQ90 1003 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 COL4A5P29400 1685 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 M0R2C6 588 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 STRIP1Q5VSL9 837 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 KIAA1211Q6ZU35 1233 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 DZIP1Q86YF9 867 aaKnown RBP18.09■□□□□ 0.49
PHGDH-205ENST00000482968 ZNF384Q8TF68 577 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 JDP2Q8WYK2 163 aa18.09■□□□□ 0.49
PHGDH-205ENST00000482968 CCDC88AQ3V6T2 1871 aa18.08■□□□□ 0.49
PHGDH-205ENST00000482968 UTRNP46939 3433 aa18.08■□□□□ 0.49
PHGDH-205ENST00000482968 PRELPP51888 382 aa18.08■□□□□ 0.48
PHGDH-205ENST00000482968 CERS5Q8N5B7 392 aa18.08■□□□□ 0.48
PHGDH-205ENST00000482968 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
PHGDH-205ENST00000482968 MAST3O60307 1309 aa18.08■□□□□ 0.48
PHGDH-205ENST00000482968 RAD50Q92878 1312 aa18.08■□□□□ 0.48
PHGDH-205ENST00000482968 RAD17O75943 681 aa18.07■□□□□ 0.48
PHGDH-205ENST00000482968 USP26Q9BXU7 913 aa18.07■□□□□ 0.48
PHGDH-205ENST00000482968 F8W031 263 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-205ENST00000482968 DACT2Q5SW24 774 aa18.07■□□□□ 0.48
PHGDH-205ENST00000482968 ADGRA1Q86SQ6 560 aa18.07■□□□□ 0.48
PHGDH-205ENST00000482968 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
PHGDH-205ENST00000482968 PTH1RQ03431 593 aa18.06■□□□□ 0.48
PHGDH-205ENST00000482968 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
PHGDH-205ENST00000482968 GPAA1O43292 621 aa18.05■□□□□ 0.48
PHGDH-205ENST00000482968 DIXDC1Q155Q3 683 aa18.05■□□□□ 0.48
PHGDH-205ENST00000482968 GPR162Q16538 588 aa18.05■□□□□ 0.48
PHGDH-205ENST00000482968 AIDAQ96BJ3 306 aa18.05■□□□□ 0.48
PHGDH-205ENST00000482968 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
PHGDH-205ENST00000482968 LSG1Q9H089 658 aaKnown RBP18.05■□□□□ 0.48
PHGDH-205ENST00000482968 PSMD14O00487 310 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 TTF2Q9UNY4 1162 aaKnown RBP18.04■□□□□ 0.48
PHGDH-205ENST00000482968 SUGT1Q9Y2Z0 365 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 IGSF3O75054 1194 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 FKBP1AP62942 108 aaKnown RBP18.04■□□□□ 0.48
PHGDH-205ENST00000482968 GSTO1P78417 241 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 CXCL9Q07325 125 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 VPS53Q5VIR6 699 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 KIAA0825Q8IV33 1275 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 ARMT1Q9H993 441 aa18.04■□□□□ 0.48
PHGDH-205ENST00000482968 MAGEB6P1A0A0J9YX57 407 aa18.03■□□□□ 0.48
PHGDH-205ENST00000482968 MBD4O95243 580 aa18.03■□□□□ 0.48
PHGDH-205ENST00000482968 LMNB1P20700 586 aa18.03■□□□□ 0.48
PHGDH-205ENST00000482968 MYH2Q9UKX2 1941 aa18.03■□□□□ 0.48
PHGDH-205ENST00000482968 LDHCP07864 332 aa18.02■□□□□ 0.48
PHGDH-205ENST00000482968 VIL1P09327 827 aaKnown RBP18.02■□□□□ 0.48
PHGDH-205ENST00000482968 SCNN1DP51172 638 aa18.02■□□□□ 0.48
PHGDH-205ENST00000482968 DYNLL1P63167 89 aaKnown RBP18.02■□□□□ 0.48
PHGDH-205ENST00000482968 TMED8Q6PL24 325 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-205ENST00000482968 STRBPQ96SI9 672 aaKnown RBP18.02■□□□□ 0.48
PHGDH-205ENST00000482968 AATFQ9NY61 560 aaKnown RBP eCLIP18.02■□□□□ 0.48
PHGDH-205ENST00000482968 HSPD1P10809 573 aaKnown RBP18.02■□□□□ 0.47
PHGDH-205ENST00000482968 CIAPIN1Q6FI81 312 aa18.02■□□□□ 0.47
PHGDH-205ENST00000482968 RSBN1LQ6PCB5 846 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-205ENST00000482968 SLF2Q8IX21 1173 aa18.02■□□□□ 0.47
PHGDH-205ENST00000482968 LCORLQ8N3X6 602 aa18.02■□□□□ 0.47
PHGDH-205ENST00000482968 MAP4K1Q92918 833 aa18.02■□□□□ 0.47
PHGDH-205ENST00000482968 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-205ENST00000482968 ZNF646O15015 1829 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-205ENST00000482968 SBF1O95248 1867 aa18.01■□□□□ 0.47
PHGDH-205ENST00000482968 TBC1D32Q96NH3 1257 aa18.01■□□□□ 0.47
PHGDH-205ENST00000482968 RIOK1Q9BRS2 568 aaKnown RBP18.01■□□□□ 0.47
PHGDH-205ENST00000482968 MAST2Q6P0Q8 1798 aa18.01■□□□□ 0.47
PHGDH-205ENST00000482968 PSME4Q14997 1843 aa18.01■□□□□ 0.47
PHGDH-205ENST00000482968 FZD9O00144 591 aa18■□□□□ 0.47
PHGDH-205ENST00000482968 APPP05067 770 aa18■□□□□ 0.47
PHGDH-205ENST00000482968 EIF6P56537 245 aaKnown RBP18■□□□□ 0.47
PHGDH-205ENST00000482968 TNIP1Q15025 636 aa18■□□□□ 0.47
PHGDH-205ENST00000482968 MROH7-TTC4A0A0A0MT08 1334 aa18■□□□□ 0.47
PHGDH-205ENST00000482968 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
PHGDH-205ENST00000482968 PRKAB2O43741 272 aa17.99■□□□□ 0.47
PHGDH-205ENST00000482968 FAM163AQ96GL9 167 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-205ENST00000482968 NOL10Q9BSC4 688 aaKnown RBP17.99■□□□□ 0.47
PHGDH-205ENST00000482968 DSCC1Q9BVC3 393 aa17.99■□□□□ 0.47
PHGDH-205ENST00000482968 RBM8AQ9Y5S9 174 aaKnown RBP17.99■□□□□ 0.47
PHGDH-205ENST00000482968 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
PHGDH-205ENST00000482968 BAG3O95817 575 aa17.99■□□□□ 0.47
PHGDH-205ENST00000482968 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
PHGDH-205ENST00000482968 TEKT1Q969V4 418 aa17.99■□□□□ 0.47
PHGDH-205ENST00000482968 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
PHGDH-205ENST00000482968 GPR75-ASB3A0A0A6YYF3 556 aa17.98■□□□□ 0.47
PHGDH-205ENST00000482968 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
PHGDH-205ENST00000482968 FOXP2O15409 715 aa17.98■□□□□ 0.47
PHGDH-205ENST00000482968 MCCP23508 829 aa17.98■□□□□ 0.47
PHGDH-205ENST00000482968 BTDP43251 543 aa17.98■□□□□ 0.47
PHGDH-205ENST00000482968 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
PHGDH-205ENST00000482968 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
PHGDH-205ENST00000482968 DAGLAQ9Y4D2 1042 aa17.98■□□□□ 0.47
PHGDH-205ENST00000482968 DICER1Q9UPY3 1922 aaKnown RBP17.97■□□□□ 0.47
PHGDH-205ENST00000482968 GRIN3BO60391 1043 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 GNAT2P19087 354 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 HSPA4P34932 840 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 CRKP46108 304 aa17.97■□□□□ 0.47
PHGDH-205ENST00000482968 NECTIN1Q15223 517 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms