RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 GMLQ99445 158 aa14.81□□□□□ -0.04
SDC1-206ENST00000482879 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
SDC1-206ENST00000482879 IGSF3O75054 1194 aa14.8□□□□□ -0.04
SDC1-206ENST00000482879 DDNO94850 711 aaPredicted RBP14.8□□□□□ -0.04
SDC1-206ENST00000482879 PDE6AP16499 860 aa14.8□□□□□ -0.04
SDC1-206ENST00000482879 RPS12P25398 132 aaKnown RBP14.8□□□□□ -0.04
SDC1-206ENST00000482879 GMPSP49915 693 aaPredicted RBP14.8□□□□□ -0.04
SDC1-206ENST00000482879 MECOMQ03112 1051 aa14.8□□□□□ -0.04
SDC1-206ENST00000482879 SLC9C2Q5TAH2 1124 aa14.8□□□□□ -0.04
SDC1-206ENST00000482879 ZSCAN25Q6NSZ9 544 aa14.8□□□□□ -0.04
SDC1-206ENST00000482879 MAGEB6Q8N7X4 407 aa14.8□□□□□ -0.04
SDC1-206ENST00000482879 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
SDC1-206ENST00000482879 RNF113AO15541 343 aaKnown RBP14.79□□□□□ -0.04
SDC1-206ENST00000482879 MAST3O60307 1309 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 ZFYP08048 801 aaPredicted RBP14.79□□□□□ -0.04
SDC1-206ENST00000482879 CYP7A1P22680 504 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 ADD2P35612 726 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 SCNN1DP51172 638 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 GSTO1P78417 241 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 NAA16Q6N069 864 aaPredicted RBP14.79□□□□□ -0.04
SDC1-206ENST00000482879 DPF2Q92785 391 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 HDAC9Q9UKV0 1011 aa14.79□□□□□ -0.04
SDC1-206ENST00000482879 MAST2Q6P0Q8 1798 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 ZNF532Q9HCE3 1301 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 CHGBP05060 677 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 LDHCP07864 332 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 USP17L8P0C7I0 530 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 SLFNL1Q499Z3 407 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 TICAM2Q86XR7 235 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 SLF2Q8IX21 1173 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 OGFOD1Q8N543 542 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 ZNF384Q8TF68 577 aa14.78□□□□□ -0.04
SDC1-206ENST00000482879 RFX7Q2KHR2 1363 aa14.77□□□□□ -0.04
SDC1-206ENST00000482879 GLTPD2A6NH11 291 aa14.77□□□□□ -0.05
SDC1-206ENST00000482879 HIP1O00291 1037 aa14.77□□□□□ -0.05
SDC1-206ENST00000482879 HDLBPQ00341 1268 aaKnown RBP14.77□□□□□ -0.05
SDC1-206ENST00000482879 UBE3CQ15386 1083 aa14.77□□□□□ -0.05
SDC1-206ENST00000482879 DIXDC1Q155Q3 683 aa14.77□□□□□ -0.05
SDC1-206ENST00000482879 TMED8Q6PL24 325 aaPredicted RBP14.77□□□□□ -0.05
SDC1-206ENST00000482879 MRIQ9BWK5 157 aa14.77□□□□□ -0.05
SDC1-206ENST00000482879 DIAPH3Q9NSV4 1193 aa14.77□□□□□ -0.05
SDC1-206ENST00000482879 CNOT7Q9UIV1 285 aaKnown RBP14.77□□□□□ -0.05
SDC1-206ENST00000482879 TCRBV5S4A2TA0A5A2 114 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 H7C1D1 291 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 CDC45O75419 566 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 CHMLP26374 656 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 CRKP46108 304 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 MMP14P50281 582 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 RBM5P52756 815 aaKnown RBP eCLIP14.76□□□□□ -0.05
SDC1-206ENST00000482879 HHIPL2Q6UWX4 724 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 MICALL2Q8IY33 904 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 TEKT1Q969V4 418 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 SERPINA10Q9UK55 444 aa14.76□□□□□ -0.05
SDC1-206ENST00000482879 ADAMTSL1Q8N6G6 1762 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 MROH7-TTC4A0A0A0MT08 1334 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 SHTN1A0MZ66 631 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 LMOD1P29536 600 aaPredicted RBP14.75□□□□□ -0.05
SDC1-206ENST00000482879 ZNF280AP59817 542 aaPredicted RBP14.75□□□□□ -0.05
SDC1-206ENST00000482879 NMIQ13287 307 aaPredicted RBP14.75□□□□□ -0.05
SDC1-206ENST00000482879 CFAP100Q494V2 611 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 CWC27Q6UX04 472 aaKnown RBP14.75□□□□□ -0.05
SDC1-206ENST00000482879 ADGRA1Q86SQ6 560 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 APPBP2Q92624 585 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 FAM163AQ96GL9 167 aaPredicted RBP14.75□□□□□ -0.05
SDC1-206ENST00000482879 FAM227BQ96M60 508 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 GPRC5DQ9NZD1 345 aa14.75□□□□□ -0.05
SDC1-206ENST00000482879 EPS15P42566 896 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 DLGAP5Q15398 846 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 RBM26Q5T8P6 1007 aaKnown RBP14.74□□□□□ -0.05
SDC1-206ENST00000482879 CASC1Q6TDU7 716 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 MIGA1Q8NAN2 632 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 RUFY2Q8WXA3 655 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 OSBP2Q969R2 916 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
SDC1-206ENST00000482879 NOL10Q9BSC4 688 aaKnown RBP14.74□□□□□ -0.05
SDC1-206ENST00000482879 HELLSQ9NRZ9 838 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 DAGLAQ9Y4D2 1042 aa14.74□□□□□ -0.05
SDC1-206ENST00000482879 GAKO14976 1311 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 GPR75-ASB3A0A0A6YYF3 556 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 A0A0D9SFI3 127 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 MAGEB6P1A0A0J9YX57 407 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 BAG3O95817 575 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 MCMDC2Q4G0Z9 681 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 ZDHHC15Q96MV8 337 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 SEC62Q99442 399 aaKnown RBP14.73□□□□□ -0.05
SDC1-206ENST00000482879 PUS7LQ9H0K6 701 aaKnown RBP14.73□□□□□ -0.05
SDC1-206ENST00000482879 MYOZ2Q9NPC6 264 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 AATFQ9NY61 560 aaKnown RBP eCLIP14.73□□□□□ -0.05
SDC1-206ENST00000482879 PCDHAC2Q9Y5I4 1007 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 SCN4AP35499 1836 aa14.73□□□□□ -0.05
SDC1-206ENST00000482879 M0R2C6 588 aa14.72□□□□□ -0.05
SDC1-206ENST00000482879 BTDP43251 543 aa14.72□□□□□ -0.05
SDC1-206ENST00000482879 PPP4CP60510 307 aa14.72□□□□□ -0.05
SDC1-206ENST00000482879 DYNLL1P63167 89 aaKnown RBP14.72□□□□□ -0.05
SDC1-206ENST00000482879 TBC1D10BQ4KMP7 808 aaPredicted RBP14.72□□□□□ -0.05
SDC1-206ENST00000482879 APOBEC3HQ6NTF7 200 aaKnown RBP14.72□□□□□ -0.05
SDC1-206ENST00000482879 SAMD7Q7Z3H4 446 aa14.72□□□□□ -0.05
SDC1-206ENST00000482879 MTMR14Q8NCE2 650 aa14.72□□□□□ -0.05
SDC1-206ENST00000482879 AIDAQ96BJ3 306 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms