RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 FHOD1Q9Y613 1164 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 NBPF26B4DH59 902 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 RNF113AO15541 343 aaKnown RBP14.35□□□□□ -0.11
CCDC78-213ENST00000482878 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
CCDC78-213ENST00000482878 NDUFA8P51970 172 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 GNL2Q13823 731 aaKnown RBP14.35□□□□□ -0.11
CCDC78-213ENST00000482878 NBPF14Q5TI25 921 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 NBPF10Q6P3W6 841 aaKnown RBP14.35□□□□□ -0.11
CCDC78-213ENST00000482878 NBPF15Q8N660 670 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 SDF4Q9BRK5 362 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 ICE2Q659A1 982 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 TTLL7Q6ZT98 887 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 NBPF11Q86T75 865 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 OSBP2Q969R2 916 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.11
CCDC78-213ENST00000482878 CLIC4Q9Y696 253 aa14.35□□□□□ -0.11
CCDC78-213ENST00000482878 SEC31AO94979 1220 aaKnown RBP14.34□□□□□ -0.11
CCDC78-213ENST00000482878 POLR3DP05423 398 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-213ENST00000482878 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 AK7Q96M32 723 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 RTEL1Q9NZ71 1219 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 OAS2P29728 719 aaKnown RBP14.34□□□□□ -0.11
CCDC78-213ENST00000482878 IL15P40933 162 aaPredicted RBP14.34□□□□□ -0.11
CCDC78-213ENST00000482878 LINC00301Q8NCQ3 95 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 GPR108Q9NPR9 543 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 A0A1B0GUL7 405 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 HAND2P61296 217 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 DPCR1Q3MIW9 517 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 NOM1Q5C9Z4 860 aaKnown RBP14.34□□□□□ -0.11
CCDC78-213ENST00000482878 LRRN4CLQ8ND94 238 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 GJB4Q9NTQ9 266 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 FAM53CQ9NYF3 392 aa14.34□□□□□ -0.11
CCDC78-213ENST00000482878 RGPD5Q99666 1765 aa14.33□□□□□ -0.11
CCDC78-213ENST00000482878 CTR9Q6PD62 1173 aa14.33□□□□□ -0.12
CCDC78-213ENST00000482878 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
CCDC78-213ENST00000482878 PUS3Q9BZE2 481 aaKnown RBP14.33□□□□□ -0.12
CCDC78-213ENST00000482878 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
CCDC78-213ENST00000482878 FOXP2O15409 715 aa14.33□□□□□ -0.12
CCDC78-213ENST00000482878 RAB11FIP4Q86YS3 637 aa14.33□□□□□ -0.12
CCDC78-213ENST00000482878 NAT10Q9H0A0 1025 aaKnown RBP14.33□□□□□ -0.12
CCDC78-213ENST00000482878 GEMIN8Q9NWZ8 242 aaKnown RBP14.33□□□□□ -0.12
CCDC78-213ENST00000482878 NEDD4P46934 1319 aa14.33□□□□□ -0.12
CCDC78-213ENST00000482878 EYA2O00167 538 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 NOP2P46087 812 aaKnown RBP14.32□□□□□ -0.12
CCDC78-213ENST00000482878 FKBP4Q02790 459 aaKnown RBP eCLIP14.32□□□□□ -0.12
CCDC78-213ENST00000482878 CWC25Q9NXE8 425 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-213ENST00000482878 KIAA1468Q9P260 1216 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 EVCP57679 992 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 YY1AP1Q9H869 796 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 RRP15Q9Y3B9 282 aaKnown RBP14.32□□□□□ -0.12
CCDC78-213ENST00000482878 STK38Q15208 465 aa14.32□□□□□ -0.12
CCDC78-213ENST00000482878 SF3A1Q15459 793 aaKnown RBP14.32□□□□□ -0.12
CCDC78-213ENST00000482878 MYCBPQ99417 103 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-213ENST00000482878 TRPM3Q9HCF6 1732 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 MYCNP04198 464 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
CCDC78-213ENST00000482878 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 NUTM2EB1AL46 878 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 KIF2AO00139 706 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 H2AFXP16104 143 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 TTC31Q49AM3 519 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 LEKR1Q6ZMV7 388 aa14.31□□□□□ -0.12
CCDC78-213ENST00000482878 NUTM2AQ8IVF1 878 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 FBXL16Q8N461 479 aa14.31□□□□□ -0.12
CCDC78-213ENST00000482878 C8orf76Q96K31 380 aa14.31□□□□□ -0.12
CCDC78-213ENST00000482878 OSBPL5Q9H0X9 879 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 HPS5Q9UPZ3 1129 aa14.31□□□□□ -0.12
CCDC78-213ENST00000482878 AFDNP55196 1824 aaKnown RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 BIN1O00499 593 aa14.31□□□□□ -0.12
CCDC78-213ENST00000482878 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 XPO4Q9C0E2 1151 aaKnown RBP14.31□□□□□ -0.12
CCDC78-213ENST00000482878 ARFGEF2Q9Y6D5 1785 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 GPTP24298 496 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 HSP90AB3PQ58FF7 597 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 MUM1L1Q5H9M0 696 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 FBXO18Q8NFZ0 1043 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 DEF6Q9H4E7 631 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 ABCC6O95255 1503 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 KLF18A0A0U1RQI7 1052 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 KIF28PB7ZC32 967 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 FGAP02671 866 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 A1BGP04217 495 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 SART3Q15020 963 aaKnown RBP14.3□□□□□ -0.12
CCDC78-213ENST00000482878 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 IFNKQ9P0W0 207 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 C1orf167Q5SNV9 1468 aa14.3□□□□□ -0.12
CCDC78-213ENST00000482878 SPTLC2O15270 562 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 PRC1O43663 620 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 NRDCO43847 1150 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 URI1O94763 535 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-213ENST00000482878 SMC2O95347 1197 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 ADAMTS2O95450 1211 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 ADORA1P30542 326 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 GSDMDP57764 484 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 WASHC4Q2M389 1173 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 MYSM1Q5VVJ2 828 aa14.29□□□□□ -0.12
CCDC78-213ENST00000482878 E4F1Q66K89 784 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms