RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 RGMBQ6NW40 437 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 MTMR14Q8NCE2 650 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 MTX1Q13505 466 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 TTLL12Q14166 644 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 DZIP1LQ8IYY4 767 aaKnown RBP12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 EXOC6Q8TAG9 804 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 BEGAINQ9BUH8 593 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 VEZTQ9HBM0 779 aa12.41□□□□□ -0.42
HLA-DQA1-206ENST00000482745 NF2P35240 595 aa12.4□□□□□ -0.42
HLA-DQA1-206ENST00000482745 MAP2K2P36507 400 aa12.4□□□□□ -0.42
HLA-DQA1-206ENST00000482745 ZNF157P51786 506 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQA1-206ENST00000482745 TBC1D22AQ8WUA7 517 aa12.4□□□□□ -0.42
HLA-DQA1-206ENST00000482745 PRMT6Q96LA8 375 aaPredicted RBP12.4□□□□□ -0.42
HLA-DQA1-206ENST00000482745 AOX1Q06278 1338 aa12.4□□□□□ -0.42
HLA-DQA1-206ENST00000482745 RLBP1P12271 317 aa12.4□□□□□ -0.43
HLA-DQA1-206ENST00000482745 CTCFP49711 727 aaPredicted RBP12.4□□□□□ -0.43
HLA-DQA1-206ENST00000482745 GRIK5Q16478 980 aa12.4□□□□□ -0.43
HLA-DQA1-206ENST00000482745 MOB2Q70IA6 237 aa12.4□□□□□ -0.43
HLA-DQA1-206ENST00000482745 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.43
HLA-DQA1-206ENST00000482745 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 FKBP1BP68106 108 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 NOGQ13253 232 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PRKG1Q13976 671 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 DEFB129Q9H1M3 183 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 C1orf115Q9H7X2 142 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SERPINA10Q9UK55 444 aa12.39□□□□□ -0.43
HLA-DQA1-206ENST00000482745 CRKP46108 304 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ZIC5Q96T25 663 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 UBE2Q2LH0YL09 131 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ADORA1P30542 326 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 LBX1P52954 281 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TFCP2Q12800 502 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 GNL3LQ9NVN8 582 aaKnown RBP12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
HLA-DQA1-206ENST00000482745 FAM155AB1AL88 458 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PHKA1P46020 1223 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SLC10A3P09131 477 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TIMM10P62072 90 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 RASAL3Q86YV0 1011 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TEKT1Q969V4 418 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ZNF70Q9UC06 446 aaPredicted RBP12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TSKSQ9UJT2 592 aa12.37□□□□□ -0.43
HLA-DQA1-206ENST00000482745 MAST3O60307 1309 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 A0A1B0GUL7 405 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 CCDC102BQ68D86 513 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 FZD1Q9UP38 647 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 AKAP2Q9Y2D5 859 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PPP2R3BQ9Y5P8 575 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SSC5DA1L4H1 1573 aa12.36□□□□□ -0.43
HLA-DQA1-206ENST00000482745 KIF23Q02241 960 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TNFAIP1Q13829 316 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 RASA3Q14644 834 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 IFFO2Q5TF58 517 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TCP10L2B9ZVM9 353 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ZBTB7BO15156 539 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 HDLBPQ00341 1268 aaKnown RBP12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 GLIPR1L2Q4G1C9 344 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 XAGE2Q96GT9 111 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 DENND2AQ9ULE3 1009 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
HLA-DQA1-206ENST00000482745 AKAP11Q9UKA4 1901 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SEMA3EO15041 775 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 CA12O43570 354 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PRDX5P30044 214 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 CACNB3P54284 484 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 POLA2Q14181 598 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 SUPT20HL1Q3ZLR7 823 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 ZDHHC15Q96MV8 337 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 TMOD2Q9NZR1 351 aa12.34□□□□□ -0.43
HLA-DQA1-206ENST00000482745 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 LDHBP07195 334 aaKnown RBP12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TNNI2P48788 182 aa12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 RASGRF1Q13972 1273 aa12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 DIXDC1Q155Q3 683 aa12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 GORABQ5T7V8 394 aa12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
HLA-DQA1-206ENST00000482745 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
HLA-DQA1-206ENST00000482745 OTOFQ9HC10 1997 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms