RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 GTF3C2Q8WUA4 911 aaPredicted RBP9.56□□□□□ -0.88
TVP23B-203ENST00000482741 PURBQ96QR8 312 aaKnown RBP9.56□□□□□ -0.88
TVP23B-203ENST00000482741 TBX4P57082 545 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 ZKSCAN2Q63HK3 967 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 ANKRD44Q8N8A2 993 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 L3MBTL3Q96JM7 780 aaPredicted RBP9.56□□□□□ -0.88
TVP23B-203ENST00000482741 RPS6KC1Q96S38 1066 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 DUSP9Q99956 384 aaKnown RBP9.56□□□□□ -0.88
TVP23B-203ENST00000482741 INPP5FQ9Y2H2 1132 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 MRVI1Q9Y6F6 885 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 BTBD11A6QL63 1104 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 SSH1Q8WYL5 1049 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 XPCQ01831 940 aaPredicted RBP9.55□□□□□ -0.88
TVP23B-203ENST00000482741 KRT27Q7Z3Y8 459 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 FANCCQ00597 558 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 CNGB1Q14028 1251 aaPredicted RBP9.55□□□□□ -0.88
TVP23B-203ENST00000482741 ODR4Q5SWX8 454 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 BCL2L12Q9HB09 334 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 COPRSQ9NQ92 184 aa9.55□□□□□ -0.88
TVP23B-203ENST00000482741 TRPM7Q96QT4 1865 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 MYH8P13535 1937 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 NEFMP07197 916 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 PLEKHG6Q3KR16 790 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 PCDHGC3Q9UN70 934 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 RPAP1Q9BWH6 1393 aaPredicted RBP9.54□□□□□ -0.88
TVP23B-203ENST00000482741 TRIM27P14373 513 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 SEPT12Q8IYM1 358 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 VGLL2Q8N8G2 317 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 GCC1Q96CN9 775 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 KIF12Q96FN5 646 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 PARP2Q9UGN5 583 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
TVP23B-203ENST00000482741 DNMT3AQ9Y6K1 912 aaPredicted RBP9.54□□□□□ -0.88
TVP23B-203ENST00000482741 EXOSC9Q06265 439 aaKnown RBP9.53□□□□□ -0.88
TVP23B-203ENST00000482741 ZNF804BA4D1E1 1349 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 SPTLC1O15269 473 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 NTSR2O95665 410 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 FBXO45P0C2W1 286 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 RTF1Q92541 710 aaKnown RBP9.53□□□□□ -0.88
TVP23B-203ENST00000482741 CCDC87Q9NVE4 849 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 RDH13Q8NBN7 331 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 ADGRG1Q9Y653 693 aa9.53□□□□□ -0.88
TVP23B-203ENST00000482741 FMNL1O95466 1100 aaPredicted RBP9.52□□□□□ -0.89
TVP23B-203ENST00000482741 FOXO4P98177 505 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 PTK7Q13308 1070 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 TSGA10IPQ3SY00 556 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 AXDND1Q5T1B0 1012 aaPredicted RBP9.52□□□□□ -0.89
TVP23B-203ENST00000482741 FBXL16Q8N461 479 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 KAZALD1Q96I82 304 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 MRIQ9BWK5 157 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 DCTPP1Q9H773 170 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 CFAP99D6REC4 459 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 RXRBP28702 533 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 MRPL58Q14197 206 aaKnown RBP9.52□□□□□ -0.89
TVP23B-203ENST00000482741 RNF187Q5TA31 235 aaPredicted RBP9.52□□□□□ -0.89
TVP23B-203ENST00000482741 LINC00116Q8NCU8 138 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 TMOD3Q9NYL9 352 aa9.52□□□□□ -0.89
TVP23B-203ENST00000482741 EN1Q05925 392 aaPredicted RBP9.51□□□□□ -0.89
TVP23B-203ENST00000482741 ITPK1Q13572 414 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 C11orf96Q7Z7L8 435 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 ZNF496Q96IT1 587 aaPredicted RBP9.51□□□□□ -0.89
TVP23B-203ENST00000482741 NEUROD4Q9HD90 331 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 NEURL1BA8MQ27 555 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 SMAPO00193 183 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 RHBDL3P58872 404 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 TCIRG1Q13488 830 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 OSBPL2Q9H1P3 480 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 LOC102724428A0A0B4J2F2 783 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 IGKV5-2P06315 115 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 SIK1P57059 783 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 POTEAQ6S8J7 498 aa9.51□□□□□ -0.89
TVP23B-203ENST00000482741 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
TVP23B-203ENST00000482741 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
TVP23B-203ENST00000482741 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 ATP8B2P98198 1209 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 CENPQQ7L2Z9 268 aaPredicted RBP9.5□□□□□ -0.89
TVP23B-203ENST00000482741 ZBTB38Q8NAP3 1195 aaPredicted RBP9.5□□□□□ -0.89
TVP23B-203ENST00000482741 METTL14Q9HCE5 456 aaKnown RBP9.5□□□□□ -0.89
TVP23B-203ENST00000482741 PTPRFP10586 1907 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 CLDN10P78369 228 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 TSPYL6Q8N831 410 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 TSPYL4Q9UJ04 414 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 FGFR2P21802 821 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 CABP4P57796 275 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 WDR78Q5VTH9 848 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 TSHZ1Q6ZSZ6 1077 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 TMC7Q7Z402 723 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 ASB16Q96NS5 453 aa9.5□□□□□ -0.89
TVP23B-203ENST00000482741 PNPLA7Q6ZV29 1317 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 ZBBXA8MT70 800 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 C3orf80F5H4A9 247 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 GNAI3P08754 354 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 FBLN1P23142 703 aa9.49□□□□□ -0.89
TVP23B-203ENST00000482741 RACK1P63244 317 aaKnown RBP9.49□□□□□ -0.89
TVP23B-203ENST00000482741 C21orf62-AS1Q17RA5 79 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms