RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 TRAF5O00463 557 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 MYO1BO43795 1136 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 LDHBP07195 334 aaKnown RBP25.63■■□□□ 1.69
SEC13-217ENST00000482647 IFIT2P09913 472 aaKnown RBP25.63■■□□□ 1.69
SEC13-217ENST00000482647 SPDYE6P0CI01 402 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 CRKP46108 304 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 TEKT1Q969V4 418 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 ARAP2Q8WZ64 1704 aa25.63■■□□□ 1.69
SEC13-217ENST00000482647 SPTY2D1Q68D10 685 aaPredicted RBP25.62■■□□□ 1.69
SEC13-217ENST00000482647 PRMT6Q96LA8 375 aaPredicted RBP25.62■■□□□ 1.69
SEC13-217ENST00000482647 BCL11AQ9H165 835 aa25.62■■□□□ 1.69
SEC13-217ENST00000482647 MCAMP43121 646 aa25.61■■□□□ 1.69
SEC13-217ENST00000482647 ABCF2Q9UG63 623 aa25.61■■□□□ 1.69
SEC13-217ENST00000482647 PCDHAC2Q9Y5I4 1007 aa25.61■■□□□ 1.69
SEC13-217ENST00000482647 PRDX5P30044 214 aa25.6■■□□□ 1.69
SEC13-217ENST00000482647 HDAC1Q13547 482 aaPredicted RBP25.6■■□□□ 1.69
SEC13-217ENST00000482647 HHIPL2Q6UWX4 724 aa25.6■■□□□ 1.69
SEC13-217ENST00000482647 TMEM88BA6NKF7 163 aa25.59■■□□□ 1.69
SEC13-217ENST00000482647 ADM5C9JUS6 153 aa25.59■■□□□ 1.69
SEC13-217ENST00000482647 PI16Q6UXB8 463 aa25.59■■□□□ 1.69
SEC13-217ENST00000482647 APOBEC3FQ8IUX4 373 aaKnown RBP25.59■■□□□ 1.69
SEC13-217ENST00000482647 CEP350Q5VT06 3117 aa25.59■■□□□ 1.69
SEC13-217ENST00000482647 FMR1Q06787 632 aaKnown RBP eCLIP25.58■■□□□ 1.69
SEC13-217ENST00000482647 ERICH6Q7L0X2 663 aa25.58■■□□□ 1.69
SEC13-217ENST00000482647 ZDHHC15Q96MV8 337 aa25.58■■□□□ 1.69
SEC13-217ENST00000482647 SNRKQ9NRH2 765 aa25.58■■□□□ 1.69
SEC13-217ENST00000482647 CREBZFQ9NS37 354 aa25.58■■□□□ 1.69
SEC13-217ENST00000482647 DZIP1Q86YF9 867 aaKnown RBP25.57■■□□□ 1.68
SEC13-217ENST00000482647 SMARCA5O60264 1052 aaPredicted RBP25.56■■□□□ 1.68
SEC13-217ENST00000482647 CELF2O95319 508 aaKnown RBP25.56■■□□□ 1.68
SEC13-217ENST00000482647 IRX6P78412 446 aaPredicted RBP25.56■■□□□ 1.68
SEC13-217ENST00000482647 TBC1D9Q6ZT07 1266 aa25.56■■□□□ 1.68
SEC13-217ENST00000482647 SLF2Q8IX21 1173 aa25.56■■□□□ 1.68
SEC13-217ENST00000482647 RWDD1Q9H446 243 aaPredicted RBP25.56■■□□□ 1.68
SEC13-217ENST00000482647 CLRN2A0PK11 232 aa25.55■■□□□ 1.68
SEC13-217ENST00000482647 CST9Q5W186 159 aa25.55■■□□□ 1.68
SEC13-217ENST00000482647 DLK2Q6UY11 383 aa25.55■■□□□ 1.68
SEC13-217ENST00000482647 TDRD3Q9H7E2 651 aaKnown RBP25.55■■□□□ 1.68
SEC13-217ENST00000482647 ZNF408Q9H9D4 720 aa25.55■■□□□ 1.68
SEC13-217ENST00000482647 LRP2BPQ9P2M1 347 aa25.55■■□□□ 1.68
SEC13-217ENST00000482647 SCAF8Q9UPN6 1271 aaKnown RBP25.55■■□□□ 1.68
SEC13-217ENST00000482647 HTRA3P83110 453 aa25.54■■□□□ 1.68
SEC13-217ENST00000482647 DIXDC1Q155Q3 683 aa25.54■■□□□ 1.68
SEC13-217ENST00000482647 SPDYE2Q495Y8 402 aa25.54■■□□□ 1.68
SEC13-217ENST00000482647 APOBEC3HQ6NTF7 200 aaKnown RBP25.54■■□□□ 1.68
SEC13-217ENST00000482647 GCC1Q96CN9 775 aa25.54■■□□□ 1.68
SEC13-217ENST00000482647 VEZTQ9HBM0 779 aa25.54■■□□□ 1.68
SEC13-217ENST00000482647 RAI14Q9P0K7 980 aa25.54■■□□□ 1.68
SEC13-217ENST00000482647 ZNF70Q9UC06 446 aaPredicted RBP25.54■■□□□ 1.68
SEC13-217ENST00000482647 CYP2E1P05181 493 aaPredicted RBP25.53■■□□□ 1.68
SEC13-217ENST00000482647 ZAP70P43403 619 aa25.53■■□□□ 1.68
SEC13-217ENST00000482647 CDCA5Q96FF9 252 aa25.53■■□□□ 1.68
SEC13-217ENST00000482647 AOX1Q06278 1338 aa25.53■■□□□ 1.68
SEC13-217ENST00000482647 IGSF3O75054 1194 aa25.52■■□□□ 1.68
SEC13-217ENST00000482647 GSTO1P78417 241 aa25.52■■□□□ 1.68
SEC13-217ENST00000482647 MECOMQ03112 1051 aa25.52■■□□□ 1.68
SEC13-217ENST00000482647 TNFAIP1Q13829 316 aa25.52■■□□□ 1.68
SEC13-217ENST00000482647 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.52■■□□□ 1.68
SEC13-217ENST00000482647 DEFB129Q9H1M3 183 aa25.52■■□□□ 1.68
SEC13-217ENST00000482647 ZBTB47Q9UFB7 747 aaPredicted RBP25.52■■□□□ 1.68
SEC13-217ENST00000482647 DAGLAQ9Y4D2 1042 aa25.52■■□□□ 1.68
SEC13-217ENST00000482647 FAM163AQ96GL9 167 aaPredicted RBP25.51■■□□□ 1.67
SEC13-217ENST00000482647 TMOD2Q9NZR1 351 aa25.51■■□□□ 1.67
SEC13-217ENST00000482647 ABT1Q9ULW3 272 aaKnown RBP25.51■■□□□ 1.67
SEC13-217ENST00000482647 PPP2R3BQ9Y5P8 575 aa25.51■■□□□ 1.67
SEC13-217ENST00000482647 MYH13Q9UKX3 1938 aa25.51■■□□□ 1.67
SEC13-217ENST00000482647 LDHCP07864 332 aa25.5■■□□□ 1.67
SEC13-217ENST00000482647 NSUN4Q96CB9 384 aaKnown RBP25.5■■□□□ 1.67
SEC13-217ENST00000482647 ATP5JP18859 108 aa25.49■■□□□ 1.67
SEC13-217ENST00000482647 PRAMEF18Q5VWM3 479 aa25.49■■□□□ 1.67
SEC13-217ENST00000482647 GPATCH3Q96I76 525 aa25.49■■□□□ 1.67
SEC13-217ENST00000482647 GAKO14976 1311 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 TNNI2P48788 182 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 RASA3Q14644 834 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 ANKRD45Q5TZF3 282 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 C2orf69Q8N8R5 385 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 PIH1D3Q9NQM4 214 aaKnown RBP25.48■■□□□ 1.67
SEC13-217ENST00000482647 ECHDC1Q9NTX5 307 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 USP40Q9NVE5 1235 aa25.48■■□□□ 1.67
SEC13-217ENST00000482647 TCP10L2B9ZVM9 353 aa25.47■■□□□ 1.67
SEC13-217ENST00000482647 NF2P35240 595 aa25.47■■□□□ 1.67
SEC13-217ENST00000482647 TTF1Q15361 905 aaPredicted RBP25.47■■□□□ 1.67
SEC13-217ENST00000482647 FKBP1CQ5VVH2 108 aa25.47■■□□□ 1.67
SEC13-217ENST00000482647 CDC42EP5Q6NZY7 148 aa25.47■■□□□ 1.67
SEC13-217ENST00000482647 DNAJC5GQ8N7S2 189 aa25.47■■□□□ 1.67
SEC13-217ENST00000482647 GBA2Q9HCG7 927 aaPredicted RBP25.47■■□□□ 1.67
SEC13-217ENST00000482647 NDUFB9Q9Y6M9 179 aa25.47■■□□□ 1.67
SEC13-217ENST00000482647 MROH7-TTC4A0A0A0MT08 1334 aa25.46■■□□□ 1.67
SEC13-217ENST00000482647 POLR2AP24928 1970 aaKnown RBP25.46■■□□□ 1.67
SEC13-217ENST00000482647 IGHDP01880 384 aa25.46■■□□□ 1.67
SEC13-217ENST00000482647 NAA16Q6N069 864 aaPredicted RBP25.46■■□□□ 1.67
SEC13-217ENST00000482647 ZNF384Q8TF68 577 aa25.46■■□□□ 1.67
SEC13-217ENST00000482647 DNAJC2Q99543 621 aaKnown RBP25.46■■□□□ 1.67
SEC13-217ENST00000482647 TLL2Q9Y6L7 1015 aa25.46■■□□□ 1.67
SEC13-217ENST00000482647 GPR75-ASB3A0A0A6YYF3 556 aa25.45■■□□□ 1.66
SEC13-217ENST00000482647 CACNB3P54284 484 aa25.45■■□□□ 1.66
SEC13-217ENST00000482647 MAP3K12Q12852 859 aa25.45■■□□□ 1.66
SEC13-217ENST00000482647 SUPT20HL1Q3ZLR7 823 aa25.45■■□□□ 1.66
SEC13-217ENST00000482647 SAPCD2Q86UD0 394 aa25.45■■□□□ 1.66
SEC13-217ENST00000482647 BOLA2Q9H3K6 86 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms