RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 ZAP70P43403 619 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 SLC9C2Q5TAH2 1124 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 PPFIBP1Q86W92 1011 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 STAMQ92783 540 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 FAM89AQ96GI7 184 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 BAG1Q99933 345 aaPredicted RBP14.62□□□□□ -0.07
VPS52-218ENST00000482399 ARFGAP3Q9NP61 516 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 DENND2AQ9ULE3 1009 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 RHOXF2BP0C7M4 288 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
VPS52-218ENST00000482399 AKAP17AQ02040 695 aaKnown RBP14.62□□□□□ -0.07
VPS52-218ENST00000482399 LONRF3Q496Y0 759 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 RBM43Q6ZSC3 357 aaKnown RBP14.62□□□□□ -0.07
VPS52-218ENST00000482399 RHOXF2Q9BQY4 288 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 TRIM34Q9BYJ4 488 aa14.62□□□□□ -0.07
VPS52-218ENST00000482399 HOOK1Q9UJC3 728 aaKnown RBP14.62□□□□□ -0.07
VPS52-218ENST00000482399 hCG_1642624A0A1W2PR95 340 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 KIF28PB7ZC32 967 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 IFIT3O14879 490 aaKnown RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 KRBA2Q6ZNG9 492 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 SMARCC2Q8TAQ2 1214 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 KCNJ14Q9UNX9 436 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 COL15A1P39059 1388 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 FOXN1O15353 648 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 OAS2P29728 719 aaKnown RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 TMEM67Q5HYA8 995 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 KRT40Q6A162 431 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 PAXIP1Q6ZW49 1069 aaPredicted RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 C10orf67Q8IYJ2 551 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 IRX2Q9BZI1 471 aaPredicted RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 RTEL1Q9NZ71 1219 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 NFE2L3Q9Y4A8 694 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 PCDHA5Q9Y5H7 936 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 NPHP4O75161 1426 aaPredicted RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 FDPSP14324 419 aaKnown RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 HNRNPH2P55795 449 aaKnown RBP14.61□□□□□ -0.07
VPS52-218ENST00000482399 FAM193AP78312 1265 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 KRT28Q7Z3Y7 464 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 ENGASEQ8NFI3 743 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 SLC52A2Q9HAB3 445 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 HELLSQ9NRZ9 838 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 IMPACTQ9P2X3 320 aa14.61□□□□□ -0.07
VPS52-218ENST00000482399 POLR2DO15514 142 aaKnown RBP14.6□□□□□ -0.07
VPS52-218ENST00000482399 GPAA1O43292 621 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 IL15P40933 162 aaPredicted RBP14.6□□□□□ -0.07
VPS52-218ENST00000482399 PPP2R3AQ06190 1150 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 IFNL2Q8IZJ0 200 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 UBE2Q2LH0YL09 131 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 WDHD1O75717 1129 aaPredicted RBP14.6□□□□□ -0.07
VPS52-218ENST00000482399 SYCP1Q15431 976 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 AIDAQ96BJ3 306 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 KCNH3Q9ULD8 1083 aa14.6□□□□□ -0.07
VPS52-218ENST00000482399 LDHAL6AQ6ZMR3 332 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 HINFPQ9BQA5 517 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 ZNF446Q9NWS9 450 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 IQSEC3Q9UPP2 1182 aaPredicted RBP14.59□□□□□ -0.07
VPS52-218ENST00000482399 EYA2O00167 538 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 ZBTB43O43298 467 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 HSP90B2PQ58FF3 399 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
VPS52-218ENST00000482399 ZNF274Q96GC6 653 aaPredicted RBP14.59□□□□□ -0.07
VPS52-218ENST00000482399 PUS7LQ9H0K6 701 aaKnown RBP14.59□□□□□ -0.07
VPS52-218ENST00000482399 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 SLC12A7Q9Y666 1083 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 ILDR1Q86SU0 546 aaPredicted RBP14.59□□□□□ -0.07
VPS52-218ENST00000482399 DHX58Q96C10 678 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 XAGE2Q96GT9 111 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 DSCC1Q9BVC3 393 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 VPS18Q9P253 973 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 PPP2R2CQ9Y2T4 447 aa14.59□□□□□ -0.07
VPS52-218ENST00000482399 TPM1P09493 284 aa14.58□□□□□ -0.07
VPS52-218ENST00000482399 PDIA6Q15084 440 aa14.58□□□□□ -0.07
VPS52-218ENST00000482399 ZMYM1Q5SVZ6 1142 aa14.58□□□□□ -0.07
VPS52-218ENST00000482399 USPL1Q5W0Q7 1092 aa14.58□□□□□ -0.07
VPS52-218ENST00000482399 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.07
VPS52-218ENST00000482399 SMARCE1Q969G3 411 aa14.58□□□□□ -0.07
VPS52-218ENST00000482399 MINDY4BA8MYZ0 360 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 IFIT5Q13325 482 aaKnown RBP14.58□□□□□ -0.08
VPS52-218ENST00000482399 SMC1AQ14683 1233 aaKnown RBP14.58□□□□□ -0.08
VPS52-218ENST00000482399 JAKMIP3Q5VZ66 844 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 BRAPQ7Z569 592 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 GOLGA6L1Q8N7Z2 621 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 GDAP1L1Q96MZ0 367 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.58□□□□□ -0.084e-7■■■■□ 25.8
VPS52-218ENST00000482399 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 ADAMTS13Q76LX8 1427 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 ERICH2A1L162 156 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 CDKL5O76039 1030 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 YEATS4O95619 227 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 TDO2P48775 406 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 AK7Q96M32 723 aa14.58□□□□□ -0.08
VPS52-218ENST00000482399 CLTCQ00610 1675 aaKnown RBP14.57□□□□□ -0.08
VPS52-218ENST00000482399 CCT6AP40227 531 aaKnown RBP14.57□□□□□ -0.08
VPS52-218ENST00000482399 ST5P78524 1137 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 KIF23Q02241 960 aaPredicted RBP14.57□□□□□ -0.08
VPS52-218ENST00000482399 TSGA10IPQ3SY00 556 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 ZNF569Q5MCW4 686 aa14.57□□□□□ -0.08
VPS52-218ENST00000482399 WWC2Q6AWC2 1192 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms