RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 DTHD1Q6ZMT9 781 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 ZNF662Q6ZS27 426 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 WFDC8Q8IUA0 241 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 FMR1NBQ8N0W7 255 aaPredicted RBP5.76□□□□□ -1.49
VPS41-212ENST00000482217 C3orf58Q8NDZ4 430 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 DRC1Q96MC2 740 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 HHIPQ96QV1 700 aa5.76□□□□□ -1.49
VPS41-212ENST00000482217 MAP4K3Q8IVH8 894 aa5.75□□□□□ -1.49
VPS41-212ENST00000482217 ASAP3Q8TDY4 903 aa5.75□□□□□ -1.49
VPS41-212ENST00000482217 LENG1Q96BZ8 264 aaPredicted RBP5.75□□□□□ -1.49
VPS41-212ENST00000482217 MUC3BQ9H195 1237 aa5.75□□□□□ -1.49
VPS41-212ENST00000482217 PRDM10Q9NQV6 1147 aa5.75□□□□□ -1.49
VPS41-212ENST00000482217 FAM229AH3BQW9 127 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 CDC27P30260 824 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 SPRED3Q2MJR0 410 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 DMRTC2Q8IXT2 367 aaPredicted RBP5.74□□□□□ -1.49
VPS41-212ENST00000482217 SREK1Q8WXA9 508 aaKnown RBP5.74□□□□□ -1.49
VPS41-212ENST00000482217 HIRIP3Q9BW71 556 aaPredicted RBP5.74□□□□□ -1.49
VPS41-212ENST00000482217 CEP44Q9C0F1 390 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 ZNF576Q9H609 170 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 SLC52A1Q9NWF4 448 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 SOX13Q9UN79 622 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 TRIM33Q9UPN9 1127 aa5.74□□□□□ -1.49
VPS41-212ENST00000482217 METTL12A8MUP2 240 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 ZNF76P36508 570 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 GRIK4Q16099 956 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 GDF6Q6KF10 455 aaPredicted RBP5.73□□□□□ -1.49
VPS41-212ENST00000482217 GIMAP6Q6P9H5 292 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 FBXO11Q86XK2 927 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 EXOC8Q8IYI6 725 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 RNF34Q969K3 372 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 NOC4LQ9BVI4 516 aaKnown RBP5.73□□□□□ -1.49
VPS41-212ENST00000482217 CLEC4MQ9H2X3 399 aaPredicted RBP5.73□□□□□ -1.49
VPS41-212ENST00000482217 TTF2Q9UNY4 1162 aaKnown RBP5.73□□□□□ -1.49
VPS41-212ENST00000482217 AKAP2Q9Y2D5 859 aa5.73□□□□□ -1.49
VPS41-212ENST00000482217 PLEKHD1A6NEE1 506 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
VPS41-212ENST00000482217 SELPP16109 830 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 CABP4P57796 275 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 FANCCQ00597 558 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 ADGRE1Q14246 886 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 MEI1Q5TIA1 1274 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 IGF2-ASQ6U949 168 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 SV2BQ7L1I2 683 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 VN1R5Q7Z5H4 357 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 LACRTQ9GZZ8 138 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 SUGT1Q9Y2Z0 365 aa5.72□□□□□ -1.49
VPS41-212ENST00000482217 H3BRJ5 948 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 K7ELQ4 463 aaPredicted RBP5.71□□□□□ -1.5
VPS41-212ENST00000482217 ADAM23O75077 832 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 RLBP1P12271 317 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 NCLP19338 710 aaKnown RBP5.71□□□□□ -1.5
VPS41-212ENST00000482217 HDLBPQ00341 1268 aaKnown RBP5.71□□□□□ -1.5
VPS41-212ENST00000482217 PCDH1Q08174 1060 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 MBTPS1Q14703 1052 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 ADAMTSL4Q6UY14 1074 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 HS2ST1Q7LGA3 356 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 TXNRD3Q86VQ6 643 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 IL22RA1Q8N6P7 574 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 WNT8BQ93098 351 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 PPP1R1BQ9UD71 204 aaPredicted RBP5.71□□□□□ -1.5
VPS41-212ENST00000482217 PPME1Q9Y570 386 aa5.71□□□□□ -1.5
VPS41-212ENST00000482217 B3GALT4O96024 378 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 ESRRAP11474 423 aaPredicted RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 EPHA1P21709 976 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 ZEB1P37275 1124 aaPredicted RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 PPP2R3AQ06190 1150 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 IKBKEQ14164 716 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 CCDC85BQ15834 202 aaPredicted RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 FAM117BQ6P1L5 589 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 METTL16Q86W50 562 aaKnown RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 DDX54Q8TDD1 881 aaKnown RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 NECAB3Q96P71 396 aaPredicted RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 SOX17Q9H6I2 414 aaPredicted RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 SEC31BQ9NQW1 1179 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 SH2B1Q9NRF2 756 aaPredicted RBP5.7□□□□□ -1.5
VPS41-212ENST00000482217 TMEM39AQ9NV64 488 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 USP21Q9UK80 565 aa5.7□□□□□ -1.5
VPS41-212ENST00000482217 DLL1O00548 723 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 PIP4K2BP78356 416 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 FAAP100Q0VG06 881 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 PWP1Q13610 501 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 ZNF423Q2M1K9 1284 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 TPTE2Q6XPS3 522 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 MICAL1Q8TDZ2 1067 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 NAP1L5Q96NT1 182 aaPredicted RBP5.69□□□□□ -1.5
VPS41-212ENST00000482217 RSRP1Q9BUV0 290 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 OSGEPQ9NPF4 335 aa5.69□□□□□ -1.5
VPS41-212ENST00000482217 GPN3Q9UHW5 284 aaPredicted RBP5.69□□□□□ -1.5
VPS41-212ENST00000482217 SOX1O00570 391 aaPredicted RBP5.68□□□□□ -1.5
VPS41-212ENST00000482217 ENC1O14682 589 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 TPD52L2O43399 206 aaKnown RBP5.68□□□□□ -1.5
VPS41-212ENST00000482217 DEAF1O75398 565 aaPredicted RBP5.68□□□□□ -1.5
VPS41-212ENST00000482217 ARL4DP49703 201 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 SHISA2Q6UWI4 295 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 ERMP1Q7Z2K6 904 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 NT5DC4Q86YG4 428 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 C8orf37Q96NL8 207 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 PLCD4Q9BRC7 762 aa5.68□□□□□ -1.5
VPS41-212ENST00000482217 MRPL18Q9H0U6 180 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms