RNA–Protein interactions for RNA: ENST00000481991.1

USP54-213, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 403 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-213ENST00000481991 A0A1W2PPC1 479 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 SSC5DA1L4H1 1573 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 PI4KAP2A4QPH2 592 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 PDHXO00330 501 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 IRF6O14896 467 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 SGPL1O95470 568 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 CWF19L2Q2TBE0 894 aaKnown RBP9.86□□□□□ -0.83
USP54-213ENST00000481991 UBE3BQ7Z3V4 1068 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 ERO1BQ86YB8 467 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 CDAN1Q8IWY9 1227 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 C7orf61Q8IZ16 206 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 PI4KAP1Q8N8J0 262 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 WRNIP1Q96S55 665 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 PRO3102Q9H379 93 aa9.86□□□□□ -0.83
USP54-213ENST00000481991 ANKRD18BA2A2Z9 1011 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 SYN1P17600 705 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 CTGFP29279 349 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 CACNB3P54284 484 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 FCGRTP55899 365 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 PRKCZQ05513 592 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 TAF7LQ5H9L4 462 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 C17orf99Q6UX52 265 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 DZIP1LQ8IYY4 767 aaKnown RBP9.85□□□□□ -0.83
USP54-213ENST00000481991 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.85□□□□□ -0.83
USP54-213ENST00000481991 PAWRQ96IZ0 340 aaKnown RBP9.85□□□□□ -0.83
USP54-213ENST00000481991 DEFB118Q96PH6 123 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 MBIPQ9NS73 344 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 TRIM35Q9UPQ4 493 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 STXBP5LQ9Y2K9 1186 aa9.85□□□□□ -0.83
USP54-213ENST00000481991 ADCY3O60266 1144 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 FRAT2O75474 233 aaPredicted RBP9.84□□□□□ -0.83
USP54-213ENST00000481991 IGKV5-2P06315 115 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 ELNP15502 786 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 BCAMP50895 628 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 MFSD14BQ5SR56 506 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 CCDC30Q5VVM6 783 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 KSR2Q6VAB6 950 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 MIGA2Q7L4E1 593 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.84□□□□□ -0.83
USP54-213ENST00000481991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.84□□□□□ -0.83
USP54-213ENST00000481991 FAM161BQ96MY7 647 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 GABRQQ9UN88 632 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 PSME4Q14997 1843 aa9.84□□□□□ -0.83
USP54-213ENST00000481991 BRCA2P51587 3418 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 SPDYE5A6NIY4 337 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 CRKP46108 304 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 WDR43Q15061 677 aaKnown RBP eCLIP9.83□□□□□ -0.84
USP54-213ENST00000481991 NECAB2Q7Z6G3 386 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 UBE2Q1Q7Z7E8 422 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 SLAIN1Q8ND83 568 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 RUNDC1Q96C34 613 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 TEPSINQ96N21 525 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 UBE2OQ9C0C9 1292 aaKnown RBP9.83□□□□□ -0.84
USP54-213ENST00000481991 MTMR10Q9NXD2 777 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 TMOD2Q9NZR1 351 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 SNCAIPQ9Y6H5 919 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 HTTP42858 3142 aa9.83□□□□□ -0.84
USP54-213ENST00000481991 H7C1W4 665 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 IL1R1P14778 569 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 FKBP1AP62942 108 aaKnown RBP9.82□□□□□ -0.84
USP54-213ENST00000481991 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
USP54-213ENST00000481991 IFIT5Q13325 482 aaKnown RBP9.82□□□□□ -0.84
USP54-213ENST00000481991 VPS37DQ86XT2 251 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 HOOK2Q96ED9 719 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 STK31Q9BXU1 1019 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 ZCCHC17Q9NP64 241 aaKnown RBP9.82□□□□□ -0.84
USP54-213ENST00000481991 CNNM1Q9NRU3 951 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 SERPINA10Q9UK55 444 aa9.82□□□□□ -0.84
USP54-213ENST00000481991 IQSEC3Q9UPP2 1182 aaPredicted RBP9.82□□□□□ -0.84
USP54-213ENST00000481991 NEURL1BA8MQ27 555 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 INHAP05111 366 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 CYP2C8P10632 490 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 GYG1P46976 350 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 FLT3LGP49771 235 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 PPATQ06203 517 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 PPIL2Q13356 520 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 DCAF15Q66K64 600 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 LDHAL6AQ6ZMR3 332 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 ANKRD23Q86SG2 305 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 C8orf58Q8NAV2 365 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 CHMP4AQ9BY43 222 aa9.81□□□□□ -0.84
USP54-213ENST00000481991 A0A0C4DFX4 3053 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 TNPO2O14787 897 aaKnown RBP9.8□□□□□ -0.84
USP54-213ENST00000481991 HIBADHP31937 336 aaKnown RBP9.8□□□□□ -0.84
USP54-213ENST00000481991 INPP5BP32019 993 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 BMP8BP34820 402 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 MAGEA10P43363 369 aaPredicted RBP9.8□□□□□ -0.84
USP54-213ENST00000481991 GNAI1P63096 354 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 CCDC57Q2TAC2 916 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 GPR153Q6NV75 609 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 GADL1Q6ZQY3 521 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 DIS3LQ8TF46 1054 aaKnown RBP9.8□□□□□ -0.84
USP54-213ENST00000481991 ZNF594Q96JF6 807 aaPredicted RBP9.8□□□□□ -0.84
USP54-213ENST00000481991 GDF15Q99988 308 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 ZNF341Q9BYN7 854 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 IRS2Q9Y4H2 1338 aa9.8□□□□□ -0.84
USP54-213ENST00000481991 ZSWIM8A7E2V4 1837 aa9.79□□□□□ -0.84
USP54-213ENST00000481991 SPEF2Q9C093 1822 aa9.79□□□□□ -0.84
USP54-213ENST00000481991 SLC4A2P04920 1241 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms