RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 WDR66Q8TBY9 1149 aa11.14□□□□□ -0.63
LINC00544-202ENST00000481738 CCDC102AQ96A19 550 aa11.14□□□□□ -0.63
LINC00544-202ENST00000481738 ZIC5Q96T25 663 aa11.14□□□□□ -0.63
LINC00544-202ENST00000481738 DEFB129Q9H1M3 183 aa11.14□□□□□ -0.63
LINC00544-202ENST00000481738 TDRD3Q9H7E2 651 aaKnown RBP11.14□□□□□ -0.63
LINC00544-202ENST00000481738 ZNF70Q9UC06 446 aaPredicted RBP11.14□□□□□ -0.63
LINC00544-202ENST00000481738 RCAN3Q9UKA8 241 aa11.14□□□□□ -0.63
LINC00544-202ENST00000481738 AKAP2Q9Y2D5 859 aa11.14□□□□□ -0.63
LINC00544-202ENST00000481738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
LINC00544-202ENST00000481738 MS4A1P11836 297 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
LINC00544-202ENST00000481738 HDLBPQ00341 1268 aaKnown RBP11.13□□□□□ -0.63
LINC00544-202ENST00000481738 POLA2Q14181 598 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 CCDC102BQ68D86 513 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 SSH3Q8TE77 659 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 TEKT1Q969V4 418 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 XAGE2Q96GT9 111 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 NEUROD6Q96NK8 337 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 BEGAINQ9BUH8 593 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 SUGT1Q9Y2Z0 365 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 PPP2R3BQ9Y5P8 575 aa11.13□□□□□ -0.63
LINC00544-202ENST00000481738 MAST3O60307 1309 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 SEMA3EO15041 775 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 SLC10A3P09131 477 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 HSPA8P11142 646 aaKnown RBP11.12□□□□□ -0.63
LINC00544-202ENST00000481738 LBX1P52954 281 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 KIF23Q02241 960 aaPredicted RBP11.12□□□□□ -0.63
LINC00544-202ENST00000481738 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
LINC00544-202ENST00000481738 RASA3Q14644 834 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 RASAL3Q86YV0 1011 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 ANGEL1Q9UNK9 670 aaKnown RBP11.12□□□□□ -0.63
LINC00544-202ENST00000481738 FZD1Q9UP38 647 aa11.12□□□□□ -0.63
LINC00544-202ENST00000481738 TCP10L2B9ZVM9 353 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 SURF6O75683 361 aaKnown RBP11.11□□□□□ -0.63
LINC00544-202ENST00000481738 PRDX5P30044 214 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 TNFAIP1Q13829 316 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 MVPQ14764 893 aaKnown RBP11.11□□□□□ -0.63
LINC00544-202ENST00000481738 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 NBPF12Q5TAG4 269 aaPredicted RBP11.11□□□□□ -0.63
LINC00544-202ENST00000481738 ZDHHC15Q96MV8 337 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 MRIQ9BWK5 157 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 COG6Q9Y2V7 657 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 SSC5DA1L4H1 1573 aa11.11□□□□□ -0.63
LINC00544-202ENST00000481738 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
LINC00544-202ENST00000481738 TNNI2P48788 182 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 CACNB3P54284 484 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 SUPT20HL1Q3ZLR7 823 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 CEP85Q6P2H3 762 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 HHIPL2Q6UWX4 724 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
LINC00544-202ENST00000481738 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.1□□□□□ -0.63
LINC00544-202ENST00000481738 ZBTB22O15209 634 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 PPP1R12BO60237 982 aaPredicted RBP11.09□□□□□ -0.63
LINC00544-202ENST00000481738 TNNI3KQ59H18 835 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 LDLRAD1Q5T700 205 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 APOBEC3HQ6NTF7 200 aaKnown RBP11.09□□□□□ -0.63
LINC00544-202ENST00000481738 TNS4Q8IZW8 715 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 ZGPATQ8N5A5 531 aaKnown RBP11.09□□□□□ -0.63
LINC00544-202ENST00000481738 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 TMOD2Q9NZR1 351 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 DDX19BQ9UMR2 479 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 NOP58Q9Y2X3 529 aaKnown RBP11.09□□□□□ -0.63
LINC00544-202ENST00000481738 DAGLAQ9Y4D2 1042 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 FPGT-TNNI3KV9GXZ4 949 aa11.09□□□□□ -0.63
LINC00544-202ENST00000481738 CA12O43570 354 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 MKRN3Q13064 507 aaKnown RBP11.08□□□□□ -0.64
LINC00544-202ENST00000481738 MAP3K11Q16584 847 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 TEPSINQ96N21 525 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 CSRNP1Q96S65 589 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 DBNDD2Q9BQY9 259 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 HMG20BQ9P0W2 317 aa11.08□□□□□ -0.64
LINC00544-202ENST00000481738 PDS5AQ29RF7 1337 aaKnown RBP11.08□□□□□ -0.64
LINC00544-202ENST00000481738 USP2O75604 605 aaPredicted RBP11.07□□□□□ -0.64
LINC00544-202ENST00000481738 UQCRFS1P1P0C7P4 283 aa11.07□□□□□ -0.64
LINC00544-202ENST00000481738 ARID4AP29374 1257 aaPredicted RBP11.07□□□□□ -0.64
LINC00544-202ENST00000481738 IREB2P48200 963 aaKnown RBP11.07□□□□□ -0.64
LINC00544-202ENST00000481738 C20orf194Q5TEA3 1177 aa11.07□□□□□ -0.64
LINC00544-202ENST00000481738 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
LINC00544-202ENST00000481738 PI16Q6UXB8 463 aa11.07□□□□□ -0.64
LINC00544-202ENST00000481738 DZIP1Q86YF9 867 aaKnown RBP11.07□□□□□ -0.64
LINC00544-202ENST00000481738 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.07□□□□□ -0.64
LINC00544-202ENST00000481738 SPATA5Q8NB90 893 aa11.07□□□□□ -0.64
LINC00544-202ENST00000481738 CLMNQ96JQ2 1002 aa11.07□□□□□ -0.64
LINC00544-202ENST00000481738 EXOC6BQ9Y2D4 811 aa11.07□□□□□ -0.64
LINC00544-202ENST00000481738 MCAMP43121 646 aa11.06□□□□□ -0.64
LINC00544-202ENST00000481738 CCDC158Q5M9N0 1113 aa11.06□□□□□ -0.64
LINC00544-202ENST00000481738 TTC39AQ5SRH9 613 aa11.06□□□□□ -0.64
LINC00544-202ENST00000481738 FKBP1CQ5VVH2 108 aa11.06□□□□□ -0.64
LINC00544-202ENST00000481738 SPRYD7Q5W111 196 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms