RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 MSANTD4Q8NCY6 345 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 CNKSR1Q969H4 720 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 PANK2Q9BZ23 570 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 IVNS1ABPQ9Y6Y0 642 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 RILPL1Q5EBL4 403 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 PLEKHM2Q8IWE5 1019 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 MPNDQ8N594 471 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 NECAB1Q8N987 351 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 XAGE2Q96GT9 111 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 KCNG1Q9UIX4 513 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 PHKG2P15735 406 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 KBTBD3Q8NAB2 608 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 ZMYM4Q5VZL5 1548 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 AATKQ6ZMQ8 1374 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 H7C1D1 291 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 FAM13AO94988 1023 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 RPL13P26373 211 aaKnown RBP10.74□□□□□ -0.69
GARNL3-216ENST00000481242 CASQ1P31415 396 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 RUFY3Q7L099 469 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 LGR6Q9HBX8 967 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 MCTP2Q6DN12 878 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 FAM196AQ6ZSG2 479 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 RAB11FIP4Q86YS3 637 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 LLPHQ9BRT6 129 aaKnown RBP10.74□□□□□ -0.69
GARNL3-216ENST00000481242 CENPHQ9H3R5 247 aa10.74□□□□□ -0.69
GARNL3-216ENST00000481242 BIN1O00499 593 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 DEXIO95424 95 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 F13A1P00488 732 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 TUBB4AP04350 444 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 ADRA2BP18089 450 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 GTF2A1P52655 376 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-216ENST00000481242 LRRC2Q9BYS8 371 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
GARNL3-216ENST00000481242 MYZAPP0CAP1 466 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 PLCD1P51178 756 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 TIMM10P62072 90 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 TMCO3Q6UWJ1 677 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 LARP6Q9BRS8 491 aaKnown RBP10.73□□□□□ -0.69
GARNL3-216ENST00000481242 MYO5CQ9NQX4 1742 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 ATP2B4P23634 1241 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 USP48Q86UV5 1035 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.73□□□□□ -0.69
GARNL3-216ENST00000481242 KDM5DQ9BY66 1539 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 DLGAP5Q15398 846 aa10.73□□□□□ -0.69
GARNL3-216ENST00000481242 TRMT1LQ7Z2T5 733 aaKnown RBP10.73□□□□□ -0.69
GARNL3-216ENST00000481242 PUF60Q9UHX1 559 aaKnown RBP10.73□□□□□ -0.69
GARNL3-216ENST00000481242 BACH1O14867 736 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 HAUS3Q68CZ6 603 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 LRSAM1Q6UWE0 723 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 SYNCQ9H7C4 482 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 ANGEL1Q9UNK9 670 aaKnown RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 MAP3K9P80192 1104 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 CPLX3Q8WVH0 158 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 CTNNBL1Q8WYA6 563 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 BEGAINQ9BUH8 593 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 GCC2Q8IWJ2 1684 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 GOLGA6L10A0A0M3HER8 536 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 MACROD2A1Z1Q3 448 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 TMCO5BA8MYB1 307 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 GIGYF1O75420 1035 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 URI1O94763 535 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 DPY19L2Q6NUT2 758 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 G2E3Q7L622 706 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 TMC6Q7Z403 805 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 FAM135BQ49AJ0 1406 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 RLBP1P12271 317 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 FAM200AQ8TCP9 573 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 LMBR1Q8WVP7 490 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 TCEANC2Q96MN5 208 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 DBNDD2Q9BQY9 259 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 BLMP54132 1417 aaPredicted RBP10.72□□□□□ -0.69
GARNL3-216ENST00000481242 ABCA8O94911 1581 aa10.72□□□□□ -0.69
GARNL3-216ENST00000481242 TARBP1Q13395 1621 aaKnown RBP10.71□□□□□ -0.69
GARNL3-216ENST00000481242 ZBED4O75132 1171 aa10.71□□□□□ -0.69
GARNL3-216ENST00000481242 CCDC65Q8IXS2 484 aa10.71□□□□□ -0.69
GARNL3-216ENST00000481242 CEP83Q9Y592 693 aa10.71□□□□□ -0.69
GARNL3-216ENST00000481242 USP19O94966 1318 aa10.71□□□□□ -0.69
GARNL3-216ENST00000481242 RAB3GAP1Q15042 981 aa10.71□□□□□ -0.69
GARNL3-216ENST00000481242 MBD5Q9P267 1494 aa10.71□□□□□ -0.7
GARNL3-216ENST00000481242 GPAA1O43292 621 aa10.71□□□□□ -0.7
GARNL3-216ENST00000481242 PCCAP05165 728 aaPredicted RBP10.71□□□□□ -0.7
GARNL3-216ENST00000481242 UBASH3AP57075 661 aa10.71□□□□□ -0.7
GARNL3-216ENST00000481242 DCAF15Q66K64 600 aa10.71□□□□□ -0.7
GARNL3-216ENST00000481242 USP25Q9UHP3 1055 aa10.71□□□□□ -0.7
GARNL3-216ENST00000481242 TRIM35Q9UPQ4 493 aa10.71□□□□□ -0.7
GARNL3-216ENST00000481242 AFMP43652 599 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 SPATA5Q8NB90 893 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 TEKT1Q969V4 418 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 CCDC102AQ96A19 550 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 GDPD2Q9HCC8 539 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 SLC5A4Q9NY91 659 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 UGGT1Q9NYU2 1555 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 SPATA31E1Q6ZUB1 1445 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 PPIP5K2O43314 1243 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 AK2P54819 239 aa10.7□□□□□ -0.7
GARNL3-216ENST00000481242 IFFO1Q0D2I5 559 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms