RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 USP17L11C9JVI0 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L21D6R901 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L18D6R9N7 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L22D6RA61 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L17D6RBQ6 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L19D6RCP7 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L20D6RJB6 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 SPEM2Q0P670 501 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 USP17L24Q0WX57 530 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 PTK7Q13308 1070 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 OGFOD2Q6N063 350 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 MEGF10Q96KG7 1140 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 SLC30A3Q99726 388 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 VRTNQ9H8Y1 702 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 ANKRD30BQ9BXX2 1392 aa8.98□□□□□ -0.97
VPS50-215ENST00000480943 FAM196BA6NMK8 535 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 EML1O00423 815 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 C8AP07357 584 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 CFAP70Q5T0N1 1121 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 SH3PXD2AQ5TCZ1 1133 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 IGF2-ASQ6U949 168 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 DMRTC2Q8IXT2 367 aaPredicted RBP8.97□□□□□ -0.97
VPS50-215ENST00000480943 JCADQ9P266 1359 aa8.97□□□□□ -0.97
VPS50-215ENST00000480943 LRP6O75581 1613 aa8.96□□□□□ -0.98
VPS50-215ENST00000480943 DPYDQ12882 1025 aa8.96□□□□□ -0.98
VPS50-215ENST00000480943 BRINP3Q76B58 766 aa8.96□□□□□ -0.98
VPS50-215ENST00000480943 POU5F2Q8N7G0 328 aa8.96□□□□□ -0.98
VPS50-215ENST00000480943 NRXN1Q9ULB1 1477 aa8.96□□□□□ -0.98
VPS50-215ENST00000480943 MARF1Q9Y4F3 1742 aaKnown RBP8.95□□□□□ -0.98
VPS50-215ENST00000480943 PPP1R12BO60237 982 aaPredicted RBP8.95□□□□□ -0.98
VPS50-215ENST00000480943 MED26O95402 600 aa8.95□□□□□ -0.98
VPS50-215ENST00000480943 HIRAP54198 1017 aaPredicted RBP8.95□□□□□ -0.98
VPS50-215ENST00000480943 LCE4AQ5TA78 99 aa8.95□□□□□ -0.98
VPS50-215ENST00000480943 FBXO11Q86XK2 927 aa8.95□□□□□ -0.98
VPS50-215ENST00000480943 ANKMY2Q8IV38 441 aa8.95□□□□□ -0.98
VPS50-215ENST00000480943 RHPN1Q8TCX5 695 aa8.95□□□□□ -0.98
VPS50-215ENST00000480943 GPC6Q9Y625 555 aaPredicted RBP8.95□□□□□ -0.98
VPS50-215ENST00000480943 C1orf167Q5SNV9 1468 aa8.95□□□□□ -0.98
VPS50-215ENST00000480943 KIF1AQ12756 1690 aa8.94□□□□□ -0.98
VPS50-215ENST00000480943 ARHGEF28Q8N1W1 1705 aaKnown RBP8.94□□□□□ -0.98
VPS50-215ENST00000480943 WNT11O96014 354 aa8.94□□□□□ -0.98
VPS50-215ENST00000480943 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
VPS50-215ENST00000480943 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
VPS50-215ENST00000480943 STK26Q9P289 416 aa8.94□□□□□ -0.98
VPS50-215ENST00000480943 LRPPRCP42704 1394 aaKnown RBP8.94□□□□□ -0.98
VPS50-215ENST00000480943 TECPR2O15040 1411 aa8.94□□□□□ -0.98
VPS50-215ENST00000480943 YTHDC2Q9H6S0 1430 aaKnown RBP8.94□□□□□ -0.98
VPS50-215ENST00000480943 C21orf2O43822 256 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 IGLV1-40P01703 118 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 AFF1P51825 1210 aaKnown RBP8.93□□□□□ -0.98
VPS50-215ENST00000480943 SFSWAPQ12872 951 aaKnown RBP8.93□□□□□ -0.98
VPS50-215ENST00000480943 TMEM132EQ6IEE7 984 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 LRRC69Q6ZNQ3 347 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
VPS50-215ENST00000480943 NUDT8Q8WV74 236 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 HINFPQ9BQA5 517 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 HCN4Q9Y3Q4 1203 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 GTF3C3Q9Y5Q9 886 aa8.93□□□□□ -0.98
VPS50-215ENST00000480943 KIAA1210Q9ULL0 1709 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
VPS50-215ENST00000480943 ATAD2Q6PL18 1390 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 PLEKHH1Q9ULM0 1364 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 TGFB1P01137 390 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 SPINK2P20155 84 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 C1orf53Q5VUE5 145 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 GAS2L2Q8NHY3 880 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 DDX17Q92841 729 aaKnown RBP8.92□□□□□ -0.98
VPS50-215ENST00000480943 UBE2OQ9C0C9 1292 aaKnown RBP8.92□□□□□ -0.98
VPS50-215ENST00000480943 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
VPS50-215ENST00000480943 ADGRB1O14514 1584 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 SPATA31A6Q5VVP1 1343 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 RFX1P22670 979 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 FBLN7Q53RD9 439 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 STAG2Q8N3U4 1231 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 ARXQ96QS3 562 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 RGS17Q9UGC6 210 aaPredicted RBP8.91□□□□□ -0.98
VPS50-215ENST00000480943 ADGRE2Q9UHX3 823 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 SLC6A14Q9UN76 642 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 USP32Q8NFA0 1604 aa8.91□□□□□ -0.98
VPS50-215ENST00000480943 ADGRB2O60241 1585 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 DLC1Q96QB1 1528 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 ABCC11Q96J66 1382 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 LGR5O75473 907 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 RGS9O75916 674 aaPredicted RBP8.9□□□□□ -0.98
VPS50-215ENST00000480943 CDCA8Q53HL2 280 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 MEX3CQ5U5Q3 659 aaKnown RBP8.9□□□□□ -0.98
VPS50-215ENST00000480943 WAPLQ7Z5K2 1190 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 CCER1Q8TC90 406 aaPredicted RBP8.9□□□□□ -0.98
VPS50-215ENST00000480943 C7orf43Q8WVR3 580 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 ORAI2Q96SN7 254 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 C2orf49Q9BVC5 232 aaPredicted RBP8.9□□□□□ -0.98
VPS50-215ENST00000480943 ITSN1Q15811 1721 aa8.9□□□□□ -0.98
VPS50-215ENST00000480943 DHX57Q6P158 1386 aaKnown RBP8.89□□□□□ -0.99
VPS50-215ENST00000480943 PNPLA6Q8IY17 1366 aa8.89□□□□□ -0.99
VPS50-215ENST00000480943 ABCA3Q99758 1704 aa8.89□□□□□ -0.99
VPS50-215ENST00000480943 TBC1D8BQ0IIM8 1120 aa8.89□□□□□ -0.99
VPS50-215ENST00000480943 MSL1Q68DK7 614 aa8.89□□□□□ -0.99
VPS50-215ENST00000480943 RAB44Q7Z6P3 723 aaPredicted RBP8.89□□□□□ -0.99
VPS50-215ENST00000480943 ASIC4Q96FT7 647 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms