RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 CEP85Q6P2H3 762 aa24.88■■□□□ 1.57
VPS36-204ENST00000480923 TEKT1Q969V4 418 aa24.88■■□□□ 1.57
VPS36-204ENST00000480923 DEFB129Q9H1M3 183 aa24.88■■□□□ 1.57
VPS36-204ENST00000480923 AOC2O75106 756 aa24.87■■□□□ 1.57
VPS36-204ENST00000480923 FKBP1BP68106 108 aa24.87■■□□□ 1.57
VPS36-204ENST00000480923 HDLBPQ00341 1268 aaKnown RBP24.87■■□□□ 1.57
VPS36-204ENST00000480923 TTLL12Q14166 644 aaPredicted RBP24.87■■□□□ 1.57
VPS36-204ENST00000480923 GORABQ5T7V8 394 aa24.87■■□□□ 1.57
VPS36-204ENST00000480923 RGMBQ6NW40 437 aa24.87■■□□□ 1.57
VPS36-204ENST00000480923 AIDAQ96BJ3 306 aa24.87■■□□□ 1.57
VPS36-204ENST00000480923 TDRD3Q9H7E2 651 aaKnown RBP24.87■■□□□ 1.57
VPS36-204ENST00000480923 ZNF70Q9UC06 446 aaPredicted RBP24.87■■□□□ 1.57
VPS36-204ENST00000480923 ZNF157P51786 506 aaPredicted RBP24.85■■□□□ 1.57
VPS36-204ENST00000480923 MAP2K1Q02750 393 aaPredicted RBP24.85■■□□□ 1.57
VPS36-204ENST00000480923 SPDYE2Q495Y8 402 aa24.85■■□□□ 1.57
VPS36-204ENST00000480923 MOB2Q70IA6 237 aa24.85■■□□□ 1.57
VPS36-204ENST00000480923 PPP2R3BQ9Y5P8 575 aa24.85■■□□□ 1.57
VPS36-204ENST00000480923 MAP2K2P36507 400 aa24.84■■□□□ 1.57
VPS36-204ENST00000480923 RASGRF1Q13972 1273 aa24.84■■□□□ 1.57
VPS36-204ENST00000480923 C20orf194Q5TEA3 1177 aa24.84■■□□□ 1.57
VPS36-204ENST00000480923 CHMP4BQ9H444 224 aaKnown RBP24.84■■□□□ 1.57
VPS36-204ENST00000480923 WBP1LQ9NX94 342 aa24.84■■□□□ 1.57
VPS36-204ENST00000480923 NOP58Q9Y2X3 529 aaKnown RBP24.84■■□□□ 1.57
VPS36-204ENST00000480923 LDHBP07195 334 aaKnown RBP24.83■■□□□ 1.57
VPS36-204ENST00000480923 PRDX5P30044 214 aa24.83■■□□□ 1.57
VPS36-204ENST00000480923 TNFAIP1Q13829 316 aa24.83■■□□□ 1.57
VPS36-204ENST00000480923 PRKG1Q13976 671 aa24.83■■□□□ 1.57
VPS36-204ENST00000480923 PDE3AQ14432 1141 aa24.83■■□□□ 1.57
VPS36-204ENST00000480923 CCDC102AQ96A19 550 aa24.83■■□□□ 1.57
VPS36-204ENST00000480923 MRIQ9BWK5 157 aa24.83■■□□□ 1.57
VPS36-204ENST00000480923 SALL1Q9NSC2 1324 aa24.83■■□□□ 1.56
VPS36-204ENST00000480923 PAPPA2Q9BXP8 1791 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 UBE2Q2LH0YL09 131 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 ZBTB22O15209 634 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 NOGQ13253 232 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 RASA3Q14644 834 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 TNNI3KQ59H18 835 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 HHIPL2Q6UWX4 724 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 ZGPATQ8N5A5 531 aaKnown RBP24.82■■□□□ 1.56
VPS36-204ENST00000480923 ZDHHC15Q96MV8 337 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 GPR108Q9NPR9 543 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 ZBTB40Q9NUA8 1239 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 FPGT-TNNI3KV9GXZ4 949 aa24.82■■□□□ 1.56
VPS36-204ENST00000480923 TCP10L2B9ZVM9 353 aa24.81■■□□□ 1.56
VPS36-204ENST00000480923 FOXN1O15353 648 aa24.81■■□□□ 1.56
VPS36-204ENST00000480923 ARMC9Q7Z3E5 817 aa24.81■■□□□ 1.56
VPS36-204ENST00000480923 BEGAINQ9BUH8 593 aa24.81■■□□□ 1.56
VPS36-204ENST00000480923 PCNTO95613 3336 aa24.8■■□□□ 1.56
VPS36-204ENST00000480923 THSD7BQ9C0I4 1608 aa24.8■■□□□ 1.56
VPS36-204ENST00000480923 SUPT20HL1Q3ZLR7 823 aa24.8■■□□□ 1.56
VPS36-204ENST00000480923 TMOD2Q9NZR1 351 aa24.8■■□□□ 1.56
VPS36-204ENST00000480923 PDS5AQ29RF7 1337 aaKnown RBP24.8■■□□□ 1.56
VPS36-204ENST00000480923 MYH13Q9UKX3 1938 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 FAM155AB1AL88 458 aaPredicted RBP24.79■■□□□ 1.56
VPS36-204ENST00000480923 SLC10A3P09131 477 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 TNNI2P48788 182 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 DIXDC1Q155Q3 683 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 APOBEC3HQ6NTF7 200 aaKnown RBP24.79■■□□□ 1.56
VPS36-204ENST00000480923 RPAP2Q8IXW5 612 aaPredicted RBP24.79■■□□□ 1.56
VPS36-204ENST00000480923 ABCF2Q9UG63 623 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 EXOC6BQ9Y2D4 811 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 ECM29Q5VYK3 1845 aa24.79■■□□□ 1.56
VPS36-204ENST00000480923 CACNB3P54284 484 aa24.78■■□□□ 1.56
VPS36-204ENST00000480923 NBPF12Q5TAG4 269 aaPredicted RBP24.78■■□□□ 1.56
VPS36-204ENST00000480923 ZIC5Q96T25 663 aa24.78■■□□□ 1.56
VPS36-204ENST00000480923 HMG20BQ9P0W2 317 aa24.78■■□□□ 1.56
VPS36-204ENST00000480923 ANGEL1Q9UNK9 670 aaKnown RBP24.78■■□□□ 1.56
VPS36-204ENST00000480923 DAGLAQ9Y4D2 1042 aa24.78■■□□□ 1.56
VPS36-204ENST00000480923 HMMRO75330 724 aa24.77■■□□□ 1.56
VPS36-204ENST00000480923 UQCRFS1P1P0C7P4 283 aa24.77■■□□□ 1.56
VPS36-204ENST00000480923 ARID4AP29374 1257 aaPredicted RBP24.77■■□□□ 1.56
VPS36-204ENST00000480923 CTCFP49711 727 aaPredicted RBP24.77■■□□□ 1.56
VPS36-204ENST00000480923 TTC39AQ5SRH9 613 aa24.77■■□□□ 1.56
VPS36-204ENST00000480923 SPTY2D1Q68D10 685 aaPredicted RBP24.77■■□□□ 1.56
VPS36-204ENST00000480923 DZIP1Q86YF9 867 aaKnown RBP24.77■■□□□ 1.56
VPS36-204ENST00000480923 ERC1Q8IUD2 1116 aa24.77■■□□□ 1.56
VPS36-204ENST00000480923 DBNDD2Q9BQY9 259 aa24.77■■□□□ 1.56
VPS36-204ENST00000480923 FZD1Q9UP38 647 aa24.77■■□□□ 1.56
VPS36-204ENST00000480923 PPP1R12BO60237 982 aaPredicted RBP24.76■■□□□ 1.55
VPS36-204ENST00000480923 HSP90AB4PQ58FF6 505 aa24.76■■□□□ 1.55
VPS36-204ENST00000480923 CCDC158Q5M9N0 1113 aa24.76■■□□□ 1.55
VPS36-204ENST00000480923 PI16Q6UXB8 463 aa24.76■■□□□ 1.55
VPS36-204ENST00000480923 RASAL3Q86YV0 1011 aa24.76■■□□□ 1.55
VPS36-204ENST00000480923 SPATA5Q8NB90 893 aa24.76■■□□□ 1.55
VPS36-204ENST00000480923 TMEM39BQ9GZU3 492 aa24.76■■□□□ 1.55
VPS36-204ENST00000480923 SSC5DA1L4H1 1573 aa24.75■■□□□ 1.55
VPS36-204ENST00000480923 MCAMP43121 646 aa24.74■■□□□ 1.55
VPS36-204ENST00000480923 KIF23Q02241 960 aaPredicted RBP24.74■■□□□ 1.55
VPS36-204ENST00000480923 ERICH6Q7L0X2 663 aa24.74■■□□□ 1.55
VPS36-204ENST00000480923 CCDC8Q9H0W5 538 aaPredicted RBP24.74■■□□□ 1.55
VPS36-204ENST00000480923 SLF2Q8IX21 1173 aa24.73■■□□□ 1.55
VPS36-204ENST00000480923 SIRT2Q8IXJ6 389 aa24.73■■□□□ 1.55
VPS36-204ENST00000480923 EAF2Q96CJ1 260 aaPredicted RBP24.73■■□□□ 1.55
VPS36-204ENST00000480923 TLR7Q9NYK1 1049 aaKnown RBP24.73■■□□□ 1.55
VPS36-204ENST00000480923 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
VPS36-204ENST00000480923 APBB1O00213 710 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 LDLRAD1Q5T700 205 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 COL13A1Q5TAT6 717 aaPredicted RBP24.72■■□□□ 1.55
VPS36-204ENST00000480923 FKBP1CQ5VVH2 108 aa24.72■■□□□ 1.55
VPS36-204ENST00000480923 CDC42EP5Q6NZY7 148 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms