RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 UBTFL1P0CB47 393 aaPredicted RBP19.07■□□□□ 0.64
LIMS3-203ENST00000480744 ZNF296Q8WUU4 475 aaPredicted RBP19.07■□□□□ 0.64
LIMS3-203ENST00000480744 WNK4Q96J92 1243 aa19.07■□□□□ 0.64
LIMS3-203ENST00000480744 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
LIMS3-203ENST00000480744 CT47B1P0C2W7 299 aaPredicted RBP19.06■□□□□ 0.64
LIMS3-203ENST00000480744 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
LIMS3-203ENST00000480744 MANSC4A6NHS7 340 aaPredicted RBP19.05■□□□□ 0.64
LIMS3-203ENST00000480744 GPR25O00155 361 aa19.05■□□□□ 0.64
LIMS3-203ENST00000480744 USP2O75604 605 aaPredicted RBP19.05■□□□□ 0.64
LIMS3-203ENST00000480744 ZBTB48P10074 688 aaPredicted RBP19.05■□□□□ 0.64
LIMS3-203ENST00000480744 SLC5A1P13866 664 aa19.05■□□□□ 0.64
LIMS3-203ENST00000480744 TNNI2P48788 182 aa19.05■□□□□ 0.64
LIMS3-203ENST00000480744 TEKT1Q969V4 418 aa19.05■□□□□ 0.64
LIMS3-203ENST00000480744 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
LIMS3-203ENST00000480744 SIL1Q9H173 461 aa19.05■□□□□ 0.64
LIMS3-203ENST00000480744 FGFR2P21802 821 aa19.04■□□□□ 0.64
LIMS3-203ENST00000480744 RGS19P49795 217 aa19.04■□□□□ 0.64
LIMS3-203ENST00000480744 CDAN1Q8IWY9 1227 aa19.04■□□□□ 0.64
LIMS3-203ENST00000480744 ANKRD13AQ8IZ07 590 aa19.04■□□□□ 0.64
LIMS3-203ENST00000480744 TMEM39BQ9GZU3 492 aa19.04■□□□□ 0.64
LIMS3-203ENST00000480744 KIF16BQ96L93 1317 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 UNCXA6NJT0 531 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 ALDH1A1P00352 501 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 CACNB3P54284 484 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 SOX10P56693 466 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 IFNL1Q8IU54 200 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 LPIN2Q92539 896 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 R3HDMLQ9H3Y0 253 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 ELP3Q9H9T3 547 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 LRRFIP2Q9Y608 721 aaKnown RBP19.03■□□□□ 0.64
LIMS3-203ENST00000480744 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
LIMS3-203ENST00000480744 FKTNO75072 461 aa19.02■□□□□ 0.64
LIMS3-203ENST00000480744 INHBEP58166 350 aa19.02■□□□□ 0.64
LIMS3-203ENST00000480744 HDLBPQ00341 1268 aaKnown RBP19.02■□□□□ 0.64
LIMS3-203ENST00000480744 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
LIMS3-203ENST00000480744 TEPSINQ96N21 525 aa19.02■□□□□ 0.64
LIMS3-203ENST00000480744 TMOD2Q9NZR1 351 aa19.02■□□□□ 0.64
LIMS3-203ENST00000480744 MAST3O60307 1309 aa19.01■□□□□ 0.63
LIMS3-203ENST00000480744 GJA5P36382 358 aa19.01■□□□□ 0.63
LIMS3-203ENST00000480744 ATP2B3Q16720 1220 aa19.01■□□□□ 0.63
LIMS3-203ENST00000480744 CEP126Q9P2H0 1117 aa19.01■□□□□ 0.63
LIMS3-203ENST00000480744 HPS5Q9UPZ3 1129 aa19.01■□□□□ 0.63
LIMS3-203ENST00000480744 IGF2BP3O00425 579 aaKnown RBP eCLIP19■□□□□ 0.63
LIMS3-203ENST00000480744 RARSP54136 660 aaKnown RBP19■□□□□ 0.63
LIMS3-203ENST00000480744 PKN2Q16513 984 aaKnown RBP19■□□□□ 0.63
LIMS3-203ENST00000480744 NOM1Q5C9Z4 860 aaKnown RBP19■□□□□ 0.63
LIMS3-203ENST00000480744 OPTNQ96CV9 577 aa19■□□□□ 0.63
LIMS3-203ENST00000480744 ZDHHC15Q96MV8 337 aa19■□□□□ 0.63
LIMS3-203ENST00000480744 MEIS3Q99687 375 aa19■□□□□ 0.63
LIMS3-203ENST00000480744 CFHR5Q9BXR6 569 aa19■□□□□ 0.63
LIMS3-203ENST00000480744 HDAC5Q9UQL6 1122 aa19■□□□□ 0.63
LIMS3-203ENST00000480744 CIAO1O76071 339 aa18.99■□□□□ 0.63
LIMS3-203ENST00000480744 WDR66Q8TBY9 1149 aa18.99■□□□□ 0.63
LIMS3-203ENST00000480744 FBXO3Q9UK99 471 aa18.99■□□□□ 0.63
LIMS3-203ENST00000480744 PA2G4Q9UQ80 394 aaKnown RBP18.99■□□□□ 0.63
LIMS3-203ENST00000480744 SUGT1Q9Y2Z0 365 aa18.99■□□□□ 0.63
LIMS3-203ENST00000480744 OTUD7BQ6GQQ9 843 aa18.98■□□□□ 0.63
LIMS3-203ENST00000480744 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
LIMS3-203ENST00000480744 GNL3LQ9NVN8 582 aaKnown RBP18.98■□□□□ 0.63
LIMS3-203ENST00000480744 CSADQ9Y600 493 aa18.98■□□□□ 0.63
LIMS3-203ENST00000480744 IL15P40933 162 aaPredicted RBP18.97■□□□□ 0.63
LIMS3-203ENST00000480744 MAP3K9P80192 1104 aa18.97■□□□□ 0.63
LIMS3-203ENST00000480744 VGLL4Q14135 290 aa18.97■□□□□ 0.63
LIMS3-203ENST00000480744 APOBEC3HQ6NTF7 200 aaKnown RBP18.97■□□□□ 0.63
LIMS3-203ENST00000480744 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
LIMS3-203ENST00000480744 MRIQ9BWK5 157 aa18.97■□□□□ 0.63
LIMS3-203ENST00000480744 MYH2Q9UKX2 1941 aa18.96■□□□□ 0.63
LIMS3-203ENST00000480744 HHIPL2Q6UWX4 724 aa18.96■□□□□ 0.63
LIMS3-203ENST00000480744 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.96■□□□□ 0.63
LIMS3-203ENST00000480744 CRHR2Q13324 411 aa18.95■□□□□ 0.62
LIMS3-203ENST00000480744 DIXDC1Q155Q3 683 aa18.95■□□□□ 0.62
LIMS3-203ENST00000480744 FBXO46Q6PJ61 603 aaPredicted RBP18.95■□□□□ 0.62
LIMS3-203ENST00000480744 FAM83AQ86UY5 434 aa18.95■□□□□ 0.62
LIMS3-203ENST00000480744 OTUD5Q96G74 571 aa18.95■□□□□ 0.62
LIMS3-203ENST00000480744 LDHBP07195 334 aaKnown RBP18.94■□□□□ 0.62
LIMS3-203ENST00000480744 GNAI3P08754 354 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 PRDX5P30044 214 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 ADORA1P30542 326 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 PHKA1P46020 1223 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 FKBP1CQ5VVH2 108 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 INTS3Q68E01 1043 aaKnown RBP18.94■□□□□ 0.62
LIMS3-203ENST00000480744 ARHGAP45Q92619 1136 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
LIMS3-203ENST00000480744 HOOK2Q96ED9 719 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 WRNIP1Q96S55 665 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 PTPN18Q99952 460 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 COPRSQ9NQ92 184 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 DAGLAQ9Y4D2 1042 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 TRIM17Q9Y577 477 aa18.94■□□□□ 0.62
LIMS3-203ENST00000480744 CCL15-CCL14A0A0B4J2E2 113 aa18.93■□□□□ 0.62
LIMS3-203ENST00000480744 TESPA1A2RU30 521 aaPredicted RBP18.93■□□□□ 0.62
LIMS3-203ENST00000480744 SRGAP3O43295 1099 aa18.93■□□□□ 0.62
LIMS3-203ENST00000480744 CCL15Q16663 113 aa18.93■□□□□ 0.62
LIMS3-203ENST00000480744 DENND2AQ9ULE3 1009 aa18.93■□□□□ 0.62
LIMS3-203ENST00000480744 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
LIMS3-203ENST00000480744 GTF2A2P52657 109 aa18.92■□□□□ 0.62
LIMS3-203ENST00000480744 DCAF15Q66K64 600 aa18.92■□□□□ 0.62
LIMS3-203ENST00000480744 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
LIMS3-203ENST00000480744 CD99L2Q8TCZ2 262 aa18.92■□□□□ 0.62
LIMS3-203ENST00000480744 BRI3BPQ8WY22 251 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms