RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 CCZ1BP86790 482 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 CCZ1P86791 482 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-203ENST00000480484 CREB3L3Q68CJ9 461 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 HOMER1Q86YM7 354 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 FAM53CQ9NYF3 392 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
COMMD4-203ENST00000480484 hCG_2014768A0A024R1R8 64 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 TULP2O00295 520 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 MYL6BP14649 208 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 CDC25BP30305 580 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 RAD51AP2Q09MP3 1159 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
COMMD4-203ENST00000480484 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 POLR3EQ9NVU0 708 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
COMMD4-203ENST00000480484 H3BQV1 296 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-203ENST00000480484 MCCD1P59942 119 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-203ENST00000480484 TOB2Q14106 344 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-203ENST00000480484 IQCB1Q15051 598 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 SASH1O94885 1247 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 TEX35Q5T0J7 233 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 ISM2Q6H9L7 571 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 GOLGA8FQ08AF8 430 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 GOLGA8DPQ0D2H9 430 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 PDIA6Q15084 440 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 NECTIN1Q15223 517 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 OTUD7BQ6GQQ9 843 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 KRBA2Q6ZNG9 492 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 DHX38Q92620 1227 aaKnown RBP11.75□□□□□ -0.53
COMMD4-203ENST00000480484 SUCLG2Q96I99 432 aa11.75□□□□□ -0.53
COMMD4-203ENST00000480484 HEG1Q9ULI3 1381 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 SLC27A2O14975 620 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 STX1AQ16623 288 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 EPHA10Q5JZY3 1008 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 RNF20Q5VTR2 975 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 BLOC1S2Q6QNY1 142 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 TMCO3Q6UWJ1 677 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 KSR2Q6VAB6 950 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 RBM43Q6ZSC3 357 aaKnown RBP11.74□□□□□ -0.53
COMMD4-203ENST00000480484 NFATC2IPQ8NCF5 419 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 FBXO41Q8TF61 875 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 PIF1Q9H611 641 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
COMMD4-203ENST00000480484 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-203ENST00000480484 FEZ2Q9UHY8 353 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-203ENST00000480484 SMC2O95347 1197 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 FMNL2Q96PY5 1086 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 GOLPH3LQ9H4A5 285 aa11.74□□□□□ -0.53
COMMD4-203ENST00000480484 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-203ENST00000480484 KDM6AO15550 1401 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-203ENST00000480484 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 SEC31AO94979 1220 aaKnown RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 H2AFXP16104 143 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 ABL2P42684 1182 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 APLP1P51693 650 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 ZCCHC17Q9NP64 241 aaKnown RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 MEGF6O75095 1541 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 EGFLAMQ63HQ2 1017 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 TM6SF1Q9BZW5 370 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 BICC1Q9H694 974 aaKnown RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 SLC20A2Q08357 652 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 PTPROQ16827 1216 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 TSNAXIP1Q2TAA8 658 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 SARM1Q6SZW1 724 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 BRF1Q92994 677 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 TMX1Q9H3N1 280 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 ARGLU1Q9NWB6 273 aaPredicted RBP11.73□□□□□ -0.53
COMMD4-203ENST00000480484 LRP6O75581 1613 aa11.73□□□□□ -0.53
COMMD4-203ENST00000480484 SIPA1L3O60292 1781 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-203ENST00000480484 CAVIN2O95810 425 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 IGKV5-2P06315 115 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 PSMA5P28066 241 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
COMMD4-203ENST00000480484 ST5P78524 1137 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 ZNF790Q6PG37 636 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 MNS1Q8NEH6 495 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 RAPGEF4Q8WZA2 1011 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 PPP1R13BQ96KQ4 1090 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 DNAI1Q9UI46 699 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.72□□□□□ -0.53
COMMD4-203ENST00000480484 C5P01031 1676 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 SF3A1Q15459 793 aaKnown RBP11.72□□□□□ -0.53
COMMD4-203ENST00000480484 E4F1Q66K89 784 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-203ENST00000480484 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 TMC6Q7Z403 805 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 CLASRPQ8N2M8 674 aaKnown RBP11.72□□□□□ -0.53
COMMD4-203ENST00000480484 TSPYL1Q9H0U9 437 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 TMEM94Q12767 1356 aa11.72□□□□□ -0.53
COMMD4-203ENST00000480484 KINO60870 393 aaKnown RBP11.71□□□□□ -0.53
COMMD4-203ENST00000480484 TPM4P67936 248 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms