RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 EAF2Q96CJ1 260 aaPredicted RBP12.21□□□□□ -0.45
SIK3-210ENST00000480468 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
SIK3-210ENST00000480468 FAM204AQ9H8W3 233 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 INTS13Q9NVM9 706 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 MRC1P22897 1456 aa12.21□□□□□ -0.45
SIK3-210ENST00000480468 TMEM232C9JQI7 657 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 MAP2K2P36507 400 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 WDR93Q6P2C0 686 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 BRAPQ7Z569 592 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 ANKRD20A12PQ8NF67 263 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 CCDC102AQ96A19 550 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 SIL1Q9H173 461 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 FLT4P35916 1363 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 CARMIL3Q8ND23 1372 aa12.21□□□□□ -0.46
SIK3-210ENST00000480468 COL15A1P39059 1388 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 SHOX2O60902 331 aaPredicted RBP12.2□□□□□ -0.46
SIK3-210ENST00000480468 PFKFB1P16118 471 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 WHAMMP3Q1A5X7 153 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 SPECC1LQ69YQ0 1117 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 ARHGEF25Q86VW2 580 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 ZNF274Q96GC6 653 aaPredicted RBP12.2□□□□□ -0.46
SIK3-210ENST00000480468 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 TECPR2O15040 1411 aa12.2□□□□□ -0.46
SIK3-210ENST00000480468 FAM237AA0A1B0GTK4 181 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 PI4KAP2A4QPH2 592 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 KIF5CO60282 957 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 SASH1O94885 1247 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 ERLIN2O94905 339 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 PRPF6O94906 941 aaKnown RBP12.19□□□□□ -0.46
SIK3-210ENST00000480468 CYP21A2P08686 494 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 VSNL1P62760 191 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 GOLGA8FQ08AF8 430 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 GOLGA8DPQ0D2H9 430 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 E2F4Q16254 413 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 OLFM4Q6UX06 510 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 PI4KAP1Q8N8J0 262 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 PANX2Q96RD6 677 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 NAA15Q9BXJ9 866 aaKnown RBP12.19□□□□□ -0.46
SIK3-210ENST00000480468 A1CFQ9NQ94 594 aaKnown RBP12.19□□□□□ -0.46
SIK3-210ENST00000480468 PIP4K2BP78356 416 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
SIK3-210ENST00000480468 MICALL1Q8N3F8 863 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 BANK1Q8NDB2 785 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 MRPL44Q9H9J2 332 aaKnown RBP12.19□□□□□ -0.46
SIK3-210ENST00000480468 CLIC4Q9Y696 253 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
SIK3-210ENST00000480468 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 RNF40O75150 1001 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 G3BP1Q13283 466 aaKnown RBP eCLIP12.18□□□□□ -0.46
SIK3-210ENST00000480468 FBXL16Q8N461 479 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 IL17REQ8NFR9 667 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 PA2G4Q9UQ80 394 aaKnown RBP12.18□□□□□ -0.46
SIK3-210ENST00000480468 HPSEQ9Y251 543 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 LAMA4Q16363 1823 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 A2ML1A8K2U0 1454 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 FOSBP53539 338 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 KARSQ15046 597 aaKnown RBP12.18□□□□□ -0.46
SIK3-210ENST00000480468 MYSM1Q5VVJ2 828 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 POTEDQ86YR6 584 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 ELOA2Q8IYF1 753 aaPredicted RBP12.18□□□□□ -0.46
SIK3-210ENST00000480468 EYA1Q99502 592 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 ZSWIM4Q9H7M6 989 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 SUGCTQ9HAC7 445 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 FANCLQ9NW38 375 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 PUF60Q9UHX1 559 aaKnown RBP12.18□□□□□ -0.46
SIK3-210ENST00000480468 ADGRG1Q9Y653 693 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 PRR36Q9H6K5 1346 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 NCKAP5LQ9HCH0 1330 aa12.18□□□□□ -0.46
SIK3-210ENST00000480468 TOPAZ1Q8N9V7 1692 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 CTAGE15A4D2H0 777 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 LRRIQ3A6PVS8 624 aaPredicted RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 EXOC5O00471 708 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 CTAGE8P0CG41 777 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 MCM3P25205 808 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 CTAGE6Q86UF2 777 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 CTAGE4Q8IX94 777 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 USP6P35125 1406 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 CTAGE9A4FU28 777 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 SYF2O95926 243 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 FDPSP14324 419 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 ZNF18P17022 549 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 BRD2P25440 801 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 PDIA3P30101 505 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 HNRNPH1P31943 449 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 SYKP43405 635 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 TRDNQ13061 729 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 ANO1Q5XXA6 986 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 PDILTQ8N807 584 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 KAT2BQ92831 832 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 CCDC8Q9H0W5 538 aaPredicted RBP12.17□□□□□ -0.46
SIK3-210ENST00000480468 MYO1AQ9UBC5 1043 aa12.17□□□□□ -0.46
SIK3-210ENST00000480468 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
SIK3-210ENST00000480468 ATP5JP18859 108 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms