RNA–Protein interactions for RNA: ENST00000480342.5

RERE-213, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-213ENST00000480342 STK38Q15208 465 aa11.53□□□□□ -0.56
RERE-213ENST00000480342 NAA16Q6N069 864 aaPredicted RBP11.53□□□□□ -0.56
RERE-213ENST00000480342 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
RERE-213ENST00000480342 ZBTB9Q96C00 473 aa11.53□□□□□ -0.56
RERE-213ENST00000480342 TMX1Q9H3N1 280 aa11.53□□□□□ -0.56
RERE-213ENST00000480342 STARD3NLO95772 234 aa11.52□□□□□ -0.56
RERE-213ENST00000480342 ARHGAP29Q52LW3 1261 aa11.52□□□□□ -0.56
RERE-213ENST00000480342 TTLL5Q6EMB2 1281 aa11.52□□□□□ -0.56
RERE-213ENST00000480342 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.56
RERE-213ENST00000480342 SMARCC1Q92922 1105 aaPredicted RBP11.52□□□□□ -0.56
RERE-213ENST00000480342 DNAI1Q9UI46 699 aa11.52□□□□□ -0.56
RERE-213ENST00000480342 GSDMDP57764 484 aa11.52□□□□□ -0.57
RERE-213ENST00000480342 HAND2P61296 217 aa11.52□□□□□ -0.57
RERE-213ENST00000480342 TIMM10P62072 90 aa11.52□□□□□ -0.57
RERE-213ENST00000480342 PTPN12Q05209 780 aaKnown RBP11.52□□□□□ -0.57
RERE-213ENST00000480342 DDB1Q16531 1140 aa11.52□□□□□ -0.57
RERE-213ENST00000480342 TICAM2Q86XR7 235 aa11.52□□□□□ -0.57
RERE-213ENST00000480342 FMR1NBQ8N0W7 255 aaPredicted RBP11.52□□□□□ -0.57
RERE-213ENST00000480342 TRIM28Q13263 835 aaKnown RBP11.51□□□□□ -0.57
RERE-213ENST00000480342 HSP90AA4PQ58FG1 418 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 KIAA1468Q9P260 1216 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 E7EWF7 191 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 POLR3GO15318 223 aaPredicted RBP11.51□□□□□ -0.57
RERE-213ENST00000480342 ATP1A3P13637 1013 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 PDIA3P30101 505 aaKnown RBP11.51□□□□□ -0.57
RERE-213ENST00000480342 CLCN6P51797 869 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 LLPHQ9BRT6 129 aaKnown RBP11.51□□□□□ -0.57
RERE-213ENST00000480342 NOL10Q9BSC4 688 aaKnown RBP11.51□□□□□ -0.57
RERE-213ENST00000480342 EPC1Q9H2F5 836 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 LY75O60449 1722 aa11.51□□□□□ -0.57
RERE-213ENST00000480342 MARCKSP29966 332 aaPredicted RBP11.51□□□□□ -0.57
RERE-213ENST00000480342 MYH3P11055 1940 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
RERE-213ENST00000480342 A0A087WZG4 1122 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 URI1O94763 535 aaPredicted RBP11.5□□□□□ -0.57
RERE-213ENST00000480342 FDPSP14324 419 aaKnown RBP11.5□□□□□ -0.57
RERE-213ENST00000480342 TAF3Q5VWG9 929 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 ADALQ6DHV7 355 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 CCDC191Q8NCU4 936 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 HAUS7Q99871 368 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 OSBPL5Q9H0X9 879 aaPredicted RBP11.5□□□□□ -0.57
RERE-213ENST00000480342 ATRNO75882 1429 aa11.5□□□□□ -0.57
RERE-213ENST00000480342 CARMIL3Q8ND23 1372 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 HMGB1P09429 215 aaKnown RBP11.49□□□□□ -0.57
RERE-213ENST00000480342 BMS1Q14692 1282 aaKnown RBP11.49□□□□□ -0.57
RERE-213ENST00000480342 RABL6Q3YEC7 729 aaPredicted RBP11.49□□□□□ -0.57
RERE-213ENST00000480342 PIGBQ92521 554 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 FBXO3Q9UK99 471 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.49□□□□□ -0.579e-7■■■□□ 17.6
RERE-213ENST00000480342 NUP98P52948 1817 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 SPEF2Q9C093 1822 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 CCDC66A2RUB6 948 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 SEC31AO94979 1220 aaKnown RBP11.49□□□□□ -0.57
RERE-213ENST00000480342 ZNF202O95125 648 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 HSPD1P10809 573 aaKnown RBP11.49□□□□□ -0.57
RERE-213ENST00000480342 LMBR1LQ6UX01 489 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 KBTBD3Q8NAB2 608 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 LINC00301Q8NCQ3 95 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 UBXN4Q92575 508 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 C8orf76Q96K31 380 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
RERE-213ENST00000480342 COPRSQ9NQ92 184 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 PAG1Q9NWQ8 432 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 FHOD1Q9Y613 1164 aa11.49□□□□□ -0.57
RERE-213ENST00000480342 ERVV-1B6SEH8 477 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
RERE-213ENST00000480342 SPTLC2O15270 562 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 SERPINC1P01008 464 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 RFX5P48382 616 aaPredicted RBP11.48□□□□□ -0.57
RERE-213ENST00000480342 EXOSC10Q01780 885 aaKnown RBP11.48□□□□□ -0.57
RERE-213ENST00000480342 SYNE3Q6ZMZ3 975 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 CCDC150Q8NCX0 1101 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 MNS1Q8NEH6 495 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 NRDCO43847 1150 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 H2AFXP16104 143 aaPredicted RBP11.48□□□□□ -0.57
RERE-213ENST00000480342 TPM4P67936 248 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 FANCCQ00597 558 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 FKBP4Q02790 459 aaKnown RBP eCLIP11.48□□□□□ -0.57
RERE-213ENST00000480342 CFAP100Q494V2 611 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 DPF2Q92785 391 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 RTEL1Q9NZ71 1219 aa11.48□□□□□ -0.57
RERE-213ENST00000480342 PNMA6AP0CW24 399 aaPredicted RBP11.47□□□□□ -0.57
RERE-213ENST00000480342 IL6STP40189 918 aaPredicted RBP11.47□□□□□ -0.57
RERE-213ENST00000480342 KIF6Q6ZMV9 814 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 CARD6Q9BX69 1037 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 L2HGDHQ9H9P8 463 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 TMEM51Q9NW97 253 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 BTAF1O14981 1849 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 CPLX1O14810 134 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
RERE-213ENST00000480342 UBASH3AP57075 661 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 PIP4K2BP78356 416 aa11.47□□□□□ -0.57
RERE-213ENST00000480342 GNL2Q13823 731 aaKnown RBP11.47□□□□□ -0.57
RERE-213ENST00000480342 ZNF594Q96JF6 807 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms